RNA–Protein interactions for RNA: ENST00000595797.5

PAF1-205, Transcript of PAF1 homolog, Paf1/RNA polymerase II complex component, humanhuman

TSL 3

Gene PAF1, Length 760 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PAF1-205ENST00000595797 KDM5DQ9BY66 1539 aa20.5■□□□□ 0.87
PAF1-205ENST00000595797 RTEL1-TNFRSF6BF6WH68 1400 aa20.5■□□□□ 0.87
PAF1-205ENST00000595797 KIF3BO15066 747 aa20.49■□□□□ 0.87
PAF1-205ENST00000595797 FAM135AQ9P2D6 1515 aa20.48■□□□□ 0.87
PAF1-205ENST00000595797 ZNF644Q9H582 1327 aaPredicted RBP20.48■□□□□ 0.87
PAF1-205ENST00000595797 DHX29Q7Z478 1369 aaKnown RBP20.47■□□□□ 0.87
PAF1-205ENST00000595797 WASHC2CQ9Y4E1 1318 aa20.47■□□□□ 0.87
PAF1-205ENST00000595797 PZPP20742 1482 aa20.46■□□□□ 0.87
PAF1-205ENST00000595797 CCDC141Q6ZP82 1450 aa20.46■□□□□ 0.87
PAF1-205ENST00000595797 ANKLE2Q86XL3 938 aa20.46■□□□□ 0.87
PAF1-205ENST00000595797 PHF23Q9BUL5 403 aaPredicted RBP20.46■□□□□ 0.87
PAF1-205ENST00000595797 MED1Q15648 1581 aaPredicted RBP20.46■□□□□ 0.87
PAF1-205ENST00000595797 SHANK2Q9UPX8 1470 aa20.45■□□□□ 0.86
PAF1-205ENST00000595797 MBD5Q9P267 1494 aa20.44■□□□□ 0.86
PAF1-205ENST00000595797 HSPA1LP34931 641 aa20.44■□□□□ 0.86
PAF1-205ENST00000595797 THEMISQ8N1K5 641 aaPredicted RBP20.44■□□□□ 0.86
PAF1-205ENST00000595797 CEP162Q5TB80 1403 aa20.44■□□□□ 0.86
PAF1-205ENST00000595797 NEURL4Q96JN8 1562 aa20.43■□□□□ 0.86
PAF1-205ENST00000595797 FBXO31Q5XUX0 539 aaPredicted RBP20.42■□□□□ 0.86
PAF1-205ENST00000595797 NLRP1Q9C000 1473 aa20.42■□□□□ 0.86
PAF1-205ENST00000595797 UGGT1Q9NYU2 1555 aa20.42■□□□□ 0.86
PAF1-205ENST00000595797 RSPH4AQ5TD94 716 aa20.41■□□□□ 0.86
PAF1-205ENST00000595797 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP20.41■□□□□ 0.86
PAF1-205ENST00000595797 CAMSAP2Q08AD1 1489 aa20.41■□□□□ 0.86
PAF1-205ENST00000595797 TSPY4P0CV99 314 aa20.39■□□□□ 0.85
PAF1-205ENST00000595797 TSPY10P0CW01 314 aa20.39■□□□□ 0.85
PAF1-205ENST00000595797 IQGAP1P46940 1657 aa20.38■□□□□ 0.85
PAF1-205ENST00000595797 NPHP4O75161 1426 aaPredicted RBP20.38■□□□□ 0.85
PAF1-205ENST00000595797 DEPDC5O75140 1603 aa20.38■□□□□ 0.85
PAF1-205ENST00000595797 MIA2Q96PC5 1412 aa20.36■□□□□ 0.85
PAF1-205ENST00000595797 NCOA2Q15596 1464 aa20.36■□□□□ 0.85
PAF1-205ENST00000595797 ZC3H13Q5T200 1668 aaKnown RBP20.35■□□□□ 0.85
PAF1-205ENST00000595797 VWDEQ8N2E2 1590 aa20.34■□□□□ 0.85
PAF1-205ENST00000595797 CFAP65Q6ZU64 1925 aaKnown RBP20.34■□□□□ 0.85
PAF1-205ENST00000595797 SENP3Q9H4L4 574 aaPredicted RBP20.34■□□□□ 0.85
PAF1-205ENST00000595797 ARHGEF5Q12774 1597 aa20.33■□□□□ 0.84
PAF1-205ENST00000595797 SYNMO15061 1565 aa20.32■□□□□ 0.84
PAF1-205ENST00000595797 RNF17Q9BXT8 1623 aaKnown RBP20.31■□□□□ 0.84
PAF1-205ENST00000595797 MED14O60244 1454 aa20.31■□□□□ 0.84
PAF1-205ENST00000595797 EIF2AK4Q9P2K8 1649 aaKnown RBP20.27■□□□□ 0.84
PAF1-205ENST00000595797 CEP152O94986 1710 aa20.27■□□□□ 0.83
PAF1-205ENST00000595797 ABCC3O15438 1527 aa20.26■□□□□ 0.83
PAF1-205ENST00000595797 STRCP1A6NGW2 1772 aa20.24■□□□□ 0.83
PAF1-205ENST00000595797 ERVK-7P63135 1459 aa20.24■□□□□ 0.83
PAF1-205ENST00000595797 MAST1Q9Y2H9 1570 aa20.23■□□□□ 0.83
PAF1-205ENST00000595797 LRRC7Q96NW7 1537 aa20.22■□□□□ 0.83
PAF1-205ENST00000595797 UBR1Q8IWV7 1749 aa20.22■□□□□ 0.83
PAF1-205ENST00000595797 SCAF11Q99590 1463 aaKnown RBP20.21■□□□□ 0.83
PAF1-205ENST00000595797 EID1Q9Y6B2 187 aa20.19■□□□□ 0.82
PAF1-205ENST00000595797 ALKQ9UM73 1620 aa20.19■□□□□ 0.82
PAF1-205ENST00000595797 STAG3Q9UJ98 1225 aa20.18■□□□□ 0.82
PAF1-205ENST00000595797 DUOX2Q9NRD8 1548 aa20.17■□□□□ 0.82
PAF1-205ENST00000595797 TXNDC2Q86VQ3 553 aa20.16■□□□□ 0.82
PAF1-205ENST00000595797 LRRC9Q6ZRR7 1453 aa20.16■□□□□ 0.82
PAF1-205ENST00000595797 MROH1Q8NDA8 1641 aa20.13■□□□□ 0.81
PAF1-205ENST00000595797 MYOM3Q5VTT5 1437 aa20.12■□□□□ 0.81
PAF1-205ENST00000595797 VPS8Q8N3P4 1428 aa20.11■□□□□ 0.81
PAF1-205ENST00000595797 KANK1Q14678 1352 aa20.11■□□□□ 0.81
PAF1-205ENST00000595797 SLIT1O75093 1534 aa20.11■□□□□ 0.81
PAF1-205ENST00000595797 XIRP1Q702N8 1843 aaKnown RBP20.1■□□□□ 0.81
PAF1-205ENST00000595797 GRWD1Q9BQ67 446 aaKnown RBP eCLIP20.09■□□□□ 0.814e-9■■■■■ 29.1
PAF1-205ENST00000595797 CROCC2H7BZ55 1655 aa20.09■□□□□ 0.81
PAF1-205ENST00000595797 PIK3C2BO00750 1634 aa20.09■□□□□ 0.81
PAF1-205ENST00000595797 KIF15Q9NS87 1388 aa20.08■□□□□ 0.81
PAF1-205ENST00000595797 PRDM15P57071 1507 aaPredicted RBP20.08■□□□□ 0.81
PAF1-205ENST00000595797 ARHGAP23Q9P227 1491 aa20.07■□□□□ 0.8
PAF1-205ENST00000595797 ERBINQ96RT1 1412 aa20.07■□□□□ 0.8
PAF1-205ENST00000595797 LTKP29376 864 aa20.06■□□□□ 0.8
PAF1-205ENST00000595797 ARHGAP31Q2M1Z3 1444 aa20.06■□□□□ 0.8
PAF1-205ENST00000595797 BCANQ96GW7 911 aa20.05■□□□□ 0.8
PAF1-205ENST00000595797 APLP2Q06481 763 aa20.04■□□□□ 0.8
PAF1-205ENST00000595797 RRP7BPQ9NSQ0 103 aa20.04■□□□□ 0.8
PAF1-205ENST00000595797 EFCAB6Q5THR3 1501 aa20.03■□□□□ 0.8
PAF1-205ENST00000595797 TMEM2Q9UHN6 1383 aa20.03■□□□□ 0.8
PAF1-205ENST00000595797 KDM5AP29375 1690 aaKnown RBP20.03■□□□□ 0.8
PAF1-205ENST00000595797 MAP3K1Q13233 1512 aa20.02■□□□□ 0.8
PAF1-205ENST00000595797 ROBO1Q9Y6N7 1651 aa20.01■□□□□ 0.79
PAF1-205ENST00000595797 PTPN23Q9H3S7 1636 aa20.01■□□□□ 0.79
PAF1-205ENST00000595797 FAM135BQ49AJ0 1406 aa20.01■□□□□ 0.79
PAF1-205ENST00000595797 TMEM94Q12767 1356 aa20■□□□□ 0.79
PAF1-205ENST00000595797 KANK4Q5T7N3 995 aaPredicted RBP20■□□□□ 0.79
PAF1-205ENST00000595797 PROSER2Q86WR7 435 aaPredicted RBP20■□□□□ 0.79
PAF1-205ENST00000595797 KCNA6P17658 529 aa19.97■□□□□ 0.79
PAF1-205ENST00000595797 MSH6P52701 1360 aa19.96■□□□□ 0.79
PAF1-205ENST00000595797 SLC26A8Q96RN1 970 aa19.96■□□□□ 0.79
PAF1-205ENST00000595797 RGS17Q9UGC6 210 aaPredicted RBP19.96■□□□□ 0.79
PAF1-205ENST00000595797 ANKRD30AQ9BXX3 1397 aa19.95■□□□□ 0.79
PAF1-205ENST00000595797 ABCC5O15440 1437 aa19.95■□□□□ 0.78
PAF1-205ENST00000595797 PHLPP1O60346 1717 aa19.95■□□□□ 0.78
PAF1-205ENST00000595797 DAPK1P53355 1430 aa19.94■□□□□ 0.78
PAF1-205ENST00000595797 NKTRP30414 1462 aaKnown RBP19.94■□□□□ 0.78
PAF1-205ENST00000595797 ADGRB3O60242 1522 aa19.94■□□□□ 0.78
PAF1-205ENST00000595797 IDI1Q13907 227 aa19.93■□□□□ 0.78
PAF1-205ENST00000595797 PPP1R15AO75807 674 aaPredicted RBP19.92■□□□□ 0.78
PAF1-205ENST00000595797 RBM33Q96EV2 1170 aaKnown RBP19.91■□□□□ 0.78
PAF1-205ENST00000595797 CHIC2Q9UKJ5 165 aa19.91■□□□□ 0.78
PAF1-205ENST00000595797 LMTK2Q8IWU2 1503 aa19.91■□□□□ 0.78
PAF1-205ENST00000595797 NWD1Q149M9 1564 aa19.9■□□□□ 0.78
PAF1-205ENST00000595797 HDGFP51858 240 aaKnown RBP19.89■□□□□ 0.77
PAF1-205ENST00000595797 POTEAQ6S8J7 498 aa19.89■□□□□ 0.77
Retrieved 100 of 20,778 RNA–protein pairs in 90.7 ms