RNA–Protein interactions for RNA: ENST00000595797.5

PAF1-205, Transcript of PAF1 homolog, Paf1/RNA polymerase II complex component, humanhuman

TSL 3

Gene PAF1, Length 760 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PAF1-205ENST00000595797 NISCHQ9Y2I1 1504 aa32.16■■■□□ 2.74
PAF1-205ENST00000595797 ABCC9O60706 1549 aa29.39■■■□□ 2.3
PAF1-205ENST00000595797 CCDC180Q9P1Z9 1646 aa29.12■■■□□ 2.25
PAF1-205ENST00000595797 RB1CC1Q8TDY2 1594 aa27.89■■■□□ 2.05
PAF1-205ENST00000595797 DNAJC5BQ9UF47 199 aa27.67■■■□□ 2.02
PAF1-205ENST00000595797 NACADO15069 1562 aa27.57■■■□□ 2
PAF1-205ENST00000595797 DCAF8L2P0C7V8 631 aa27.45■■□□□ 1.98
PAF1-205ENST00000595797 PABPN1Q86U42 306 aaKnown RBP eCLIP27.27■■□□□ 1.96
PAF1-205ENST00000595797 UNC13AQ9UPW8 1703 aa27.24■■□□□ 1.95
PAF1-205ENST00000595797 MYO15BQ96JP2 1530 aa27■■□□□ 1.91
PAF1-205ENST00000595797 BICRAQ9NZM4 1560 aa26.92■■□□□ 1.9
PAF1-205ENST00000595797 SHROOM4Q9ULL8 1493 aa26.64■■□□□ 1.86
PAF1-205ENST00000595797 ZCCHC6Q5VYS8 1495 aaKnown RBP26.58■■□□□ 1.85
PAF1-205ENST00000595797 CC2D2AQ9P2K1 1620 aa26.54■■□□□ 1.84
PAF1-205ENST00000595797 DCAF1Q9Y4B6 1507 aa26.53■■□□□ 1.84
PAF1-205ENST00000595797 SCRIBQ14160 1630 aa26.51■■□□□ 1.83
PAF1-205ENST00000595797 CECR2Q9BXF3 1484 aa26.51■■□□□ 1.83
PAF1-205ENST00000595797 EIF4G1Q04637 1599 aaKnown RBP26.38■■□□□ 1.81
PAF1-205ENST00000595797 DNAJC5Q9H3Z4 198 aa25.76■■□□□ 1.71
PAF1-205ENST00000595797 ERCC6Q03468 1493 aa25.51■■□□□ 1.67
PAF1-205ENST00000595797 CUX2O14529 1486 aa25.48■■□□□ 1.67
PAF1-205ENST00000595797 NCAPD3P42695 1498 aa25.36■■□□□ 1.65
PAF1-205ENST00000595797 SMARCA2P51531 1590 aa25.27■■□□□ 1.64
PAF1-205ENST00000595797 ATAD2BQ9ULI0 1458 aa25.26■■□□□ 1.63
PAF1-205ENST00000595797 SMARCA4P51532 1647 aa25.22■■□□□ 1.63
PAF1-205ENST00000595797 HMGXB3Q12766 1538 aa25.22■■□□□ 1.63
PAF1-205ENST00000595797 BAZ1BQ9UIG0 1483 aaKnown RBP25.09■■□□□ 1.61
PAF1-205ENST00000595797 NESP48681 1621 aa25.09■■□□□ 1.61
PAF1-205ENST00000595797 BAZ1AQ9NRL2 1556 aaPredicted RBP25.06■■□□□ 1.6
PAF1-205ENST00000595797 LAMC3Q9Y6N6 1575 aa24.96■■□□□ 1.59
PAF1-205ENST00000595797 THOC2Q8NI27 1593 aaKnown RBP24.95■■□□□ 1.58
PAF1-205ENST00000595797 PEG3Q9GZU2 1588 aa24.9■■□□□ 1.58
PAF1-205ENST00000595797 KIF21AQ7Z4S6 1674 aa24.87■■□□□ 1.57
PAF1-205ENST00000595797 PDS5BQ9NTI5 1447 aa24.83■■□□□ 1.57
PAF1-205ENST00000595797 MROH2BQ7Z745 1585 aa24.76■■□□□ 1.55
PAF1-205ENST00000595797 TRIM41Q8WV44 630 aa24.64■■□□□ 1.54
PAF1-205ENST00000595797 CADPSQ9ULU8 1353 aa24.61■■□□□ 1.53
PAF1-205ENST00000595797 MRC2Q9UBG0 1479 aa24.61■■□□□ 1.53
PAF1-205ENST00000595797 WDR62O43379 1518 aa24.53■■□□□ 1.52
PAF1-205ENST00000595797 WIZO95785 1651 aa24.51■■□□□ 1.51
PAF1-205ENST00000595797 CEP164Q9UPV0 1460 aa24.49■■□□□ 1.51
PAF1-205ENST00000595797 FANCD2Q9BXW9 1451 aa24.38■■□□□ 1.49
PAF1-205ENST00000595797 OSCARQ8IYS5 282 aa24.27■■□□□ 1.48
PAF1-205ENST00000595797 CFTRP13569 1480 aa24.24■■□□□ 1.47
PAF1-205ENST00000595797 TOP2AP11388 1531 aaKnown RBP24.18■■□□□ 1.46
PAF1-205ENST00000595797 PRDM2Q13029 1718 aa24.17■■□□□ 1.46
PAF1-205ENST00000595797 URB2Q14146 1524 aaKnown RBP24.14■■□□□ 1.45
PAF1-205ENST00000595797 RSF1Q96T23 1441 aaPredicted RBP24.1■■□□□ 1.45
PAF1-205ENST00000595797 RIMBP3CA6NJZ7 1639 aa23.99■■□□□ 1.43
PAF1-205ENST00000595797 RIMBP3BA6NNM3 1639 aa23.99■■□□□ 1.43
PAF1-205ENST00000595797 RIMBP3Q9UFD9 1639 aa23.99■■□□□ 1.43
PAF1-205ENST00000595797 IFT140Q96RY7 1462 aa23.98■■□□□ 1.43
PAF1-205ENST00000595797 ZNF608Q9ULD9 1512 aaPredicted RBP23.89■■□□□ 1.42
PAF1-205ENST00000595797 ABCC8Q09428 1581 aa23.86■■□□□ 1.41
PAF1-205ENST00000595797 ARHGEF11O15085 1522 aa23.86■■□□□ 1.41
PAF1-205ENST00000595797 TOPBP1Q92547 1522 aa23.86■■□□□ 1.41
PAF1-205ENST00000595797 CCDC88BA6NC98 1476 aa23.85■■□□□ 1.41
PAF1-205ENST00000595797 EIF4G3O43432 1585 aaKnown RBP23.84■■□□□ 1.41
PAF1-205ENST00000595797 DNMBPQ6XZF7 1577 aa23.78■■□□□ 1.4
PAF1-205ENST00000595797 CHD1O14646 1710 aa23.78■■□□□ 1.4
PAF1-205ENST00000595797 CYB5RLQ6IPT4 315 aa23.73■■□□□ 1.39
PAF1-205ENST00000595797 FBLN2P98095 1184 aa23.71■■□□□ 1.39
PAF1-205ENST00000595797 TRHP20396 242 aaPredicted RBP23.68■■□□□ 1.38
PAF1-205ENST00000595797 TARBP1Q13395 1621 aaKnown RBP23.66■■□□□ 1.38
PAF1-205ENST00000595797 AQRO60306 1485 aaKnown RBP eCLIP23.65■■□□□ 1.382e-8■■■■■ 39.4
PAF1-205ENST00000595797 POLA1P09884 1462 aaPredicted RBP23.58■■□□□ 1.37
PAF1-205ENST00000595797 ARAP1Q96P48 1450 aa23.56■■□□□ 1.36
PAF1-205ENST00000595797 SOGA1O94964 1423 aa23.5■■□□□ 1.35
PAF1-205ENST00000595797 RAD54L2Q9Y4B4 1467 aa23.49■■□□□ 1.35
PAF1-205ENST00000595797 WDR97A6NE52 1622 aa23.48■■□□□ 1.35
PAF1-205ENST00000595797 TDRD9Q8NDG6 1382 aaKnown RBP23.47■■□□□ 1.35
PAF1-205ENST00000595797 SYNJ1O43426 1573 aa23.46■■□□□ 1.35
PAF1-205ENST00000595797 SNAPC4Q5SXM2 1469 aa23.46■■□□□ 1.35
PAF1-205ENST00000595797 CHMP7Q8WUX9 453 aaPredicted RBP23.44■■□□□ 1.34
PAF1-205ENST00000595797 FGD5Q6ZNL6 1462 aa23.42■■□□□ 1.34
PAF1-205ENST00000595797 MAGI1Q96QZ7 1491 aaPredicted RBP23.4■■□□□ 1.34
PAF1-205ENST00000595797 CLASP1Q7Z460 1538 aa23.38■■□□□ 1.33
PAF1-205ENST00000595797 GRIN2BQ13224 1484 aa23.35■■□□□ 1.33
PAF1-205ENST00000595797 PBRM1Q86U86 1689 aa23.32■■□□□ 1.32
PAF1-205ENST00000595797 SYNJ2O15056 1496 aa23.3■■□□□ 1.32
PAF1-205ENST00000595797 AEBP2Q6ZN18 517 aaPredicted RBP23.3■■□□□ 1.32
PAF1-205ENST00000595797 CUX1P39880 1505 aa23.29■■□□□ 1.32
PAF1-205ENST00000595797 GAPVD1Q14C86 1478 aa23.23■■□□□ 1.31
PAF1-205ENST00000595797 ABCA5Q8WWZ7 1642 aa23.12■■□□□ 1.29
PAF1-205ENST00000595797 ABCA10Q8WWZ4 1543 aa23.11■■□□□ 1.29
PAF1-205ENST00000595797 GRIN2AQ12879 1464 aa23.04■■□□□ 1.28
PAF1-205ENST00000595797 ADAMTS12P58397 1594 aa23.01■■□□□ 1.27
PAF1-205ENST00000595797 WRNQ14191 1432 aaPredicted RBP eCLIP23■■□□□ 1.27
PAF1-205ENST00000595797 CEP170Q5SW79 1584 aa22.97■■□□□ 1.27
PAF1-205ENST00000595797 ERCC6L2Q5T890 1561 aa22.96■■□□□ 1.27
PAF1-205ENST00000595797 SUPT5HO00267 1087 aaKnown RBP22.93■■□□□ 1.26
PAF1-205ENST00000595797 NUP160Q12769 1436 aa22.91■■□□□ 1.26
PAF1-205ENST00000595797 FHAD1B1AJZ9 1412 aa22.91■■□□□ 1.26
PAF1-205ENST00000595797 BIVM-ERCC5R4GMW8 1640 aa22.9■■□□□ 1.26
PAF1-205ENST00000595797 TOP2BQ02880 1626 aa22.89■■□□□ 1.25
PAF1-205ENST00000595797 SHROOM2Q13796 1616 aa22.89■■□□□ 1.25
PAF1-205ENST00000595797 ERICH3Q5RHP9 1530 aa22.85■■□□□ 1.25
PAF1-205ENST00000595797 KIF13AQ9H1H9 1805 aa22.83■■□□□ 1.25
PAF1-205ENST00000595797 PRG4Q92954 1404 aaPredicted RBP22.78■■□□□ 1.24
PAF1-205ENST00000595797 NPM1P06748 294 aaKnown RBP eCLIP22.76■■□□□ 1.23
Retrieved 100 of 20,778 RNA–protein pairs in 71.5 ms