RNA–Protein interactions for RNA: ENST00000593641.3

SSBP4-203, Transcript of single stranded DNA binding protein 4, humanhuman

TSL 5

Gene SSBP4, Length 900 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP4-203ENST00000593641 LOC105371045A0A1W2PR82 267 aa35.94■■■■□ 3.34
SSBP4-203ENST00000593641 TSPY4P0CV99 314 aa35.94■■■■□ 3.34
SSBP4-203ENST00000593641 TSPY10P0CW01 314 aa35.94■■■■□ 3.34
SSBP4-203ENST00000593641 A2ML1A8K2U0 1454 aa35.92■■■■□ 3.34
SSBP4-203ENST00000593641 TCOF1Q13428 1488 aaKnown RBP35.92■■■■□ 3.34
SSBP4-203ENST00000593641 DNMT1P26358 1616 aaKnown RBP35.89■■■■□ 3.34
SSBP4-203ENST00000593641 PZPP20742 1482 aa35.88■■■■□ 3.33
SSBP4-203ENST00000593641 WASHC2CQ9Y4E1 1318 aa35.87■■■■□ 3.33
SSBP4-203ENST00000593641 MAP3K1Q13233 1512 aa35.87■■■■□ 3.33
SSBP4-203ENST00000593641 TNRQ92752 1358 aa35.86■■■■□ 3.33
SSBP4-203ENST00000593641 ZNF335Q9H4Z2 1342 aaPredicted RBP35.84■■■■□ 3.33
SSBP4-203ENST00000593641 MAST1Q9Y2H9 1570 aa35.82■■■■□ 3.32
SSBP4-203ENST00000593641 POLR1AO95602 1720 aaPredicted RBP35.81■■■■□ 3.32
SSBP4-203ENST00000593641 FBXO31Q5XUX0 539 aaPredicted RBP35.81■■■■□ 3.32
SSBP4-203ENST00000593641 KANK4Q5T7N3 995 aaPredicted RBP35.78■■■■□ 3.32
SSBP4-203ENST00000593641 MYOM3Q5VTT5 1437 aa35.77■■■■□ 3.32
SSBP4-203ENST00000593641 MIA2Q96PC5 1412 aa35.77■■■■□ 3.32
SSBP4-203ENST00000593641 RNF17Q9BXT8 1623 aaKnown RBP35.77■■■■□ 3.32
SSBP4-203ENST00000593641 EIF2AK4Q9P2K8 1649 aaKnown RBP35.74■■■■□ 3.31
SSBP4-203ENST00000593641 ZC3H13Q5T200 1668 aaKnown RBP35.74■■■■□ 3.31
SSBP4-203ENST00000593641 NLRP1Q9C000 1473 aa35.72■■■■□ 3.31
SSBP4-203ENST00000593641 DISP3Q9P2K9 1392 aa35.7■■■■□ 3.31
SSBP4-203ENST00000593641 ABCC3O15438 1527 aa35.68■■■■□ 3.3
SSBP4-203ENST00000593641 NEURL4Q96JN8 1562 aa35.68■■■■□ 3.3
SSBP4-203ENST00000593641 UGGT1Q9NYU2 1555 aa35.67■■■■□ 3.3
SSBP4-203ENST00000593641 UBAP1LF5GYI3 381 aa35.65■■■■□ 3.3
SSBP4-203ENST00000593641 THEMISQ8N1K5 641 aaPredicted RBP35.65■■■■□ 3.3
SSBP4-203ENST00000593641 APLP2Q06481 763 aa35.63■■■■□ 3.29
SSBP4-203ENST00000593641 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP35.63■■■■□ 3.293e-9■□□□□ 11.1
SSBP4-203ENST00000593641 DUOX2Q9NRD8 1548 aa35.62■■■■□ 3.29
SSBP4-203ENST00000593641 ANKLE2Q86XL3 938 aa35.62■■■■□ 3.29
SSBP4-203ENST00000593641 CEP152O94986 1710 aa35.6■■■■□ 3.29
SSBP4-203ENST00000593641 SPATA31D1Q6ZQQ2 1576 aa35.6■■■■□ 3.29
SSBP4-203ENST00000593641 MROH1Q8NDA8 1641 aa35.6■■■■□ 3.29
SSBP4-203ENST00000593641 CROCC2H7BZ55 1655 aa35.59■■■■□ 3.29
SSBP4-203ENST00000593641 CFAP65Q6ZU64 1925 aaKnown RBP35.58■■■■□ 3.29
SSBP4-203ENST00000593641 CPS1P31327 1500 aa35.57■■■■□ 3.29
SSBP4-203ENST00000593641 DEPDC5O75140 1603 aa35.57■■■■□ 3.28
SSBP4-203ENST00000593641 PTPN23Q9H3S7 1636 aa35.57■■■■□ 3.28
SSBP4-203ENST00000593641 SHANK2Q9UPX8 1470 aa35.56■■■■□ 3.28
SSBP4-203ENST00000593641 ERVK-7P63135 1459 aa35.55■■■■□ 3.28
SSBP4-203ENST00000593641 KIF15Q9NS87 1388 aa35.53■■■■□ 3.28
SSBP4-203ENST00000593641 NPHP4O75161 1426 aaPredicted RBP35.52■■■■□ 3.28
SSBP4-203ENST00000593641 MED14O60244 1454 aa35.51■■■■□ 3.28
SSBP4-203ENST00000593641 ABCC5O15440 1437 aa35.5■■■■□ 3.27
SSBP4-203ENST00000593641 IQGAP1P46940 1657 aa35.49■■■■□ 3.27
SSBP4-203ENST00000593641 ERBINQ96RT1 1412 aa35.49■■■■□ 3.27
SSBP4-203ENST00000593641 PRDM15P57071 1507 aaPredicted RBP35.48■■■■□ 3.27
SSBP4-203ENST00000593641 VWDEQ8N2E2 1590 aa35.47■■■■□ 3.27
SSBP4-203ENST00000593641 DAPK1P53355 1430 aa35.45■■■■□ 3.27
SSBP4-203ENST00000593641 FGD6Q6ZV73 1430 aa35.44■■■■□ 3.26
SSBP4-203ENST00000593641 ILDR2Q71H61 639 aa35.44■■■■□ 3.26
SSBP4-203ENST00000593641 RRP7BPQ9NSQ0 103 aa35.44■■■■□ 3.26
SSBP4-203ENST00000593641 UBR1Q8IWV7 1749 aa35.43■■■■□ 3.26
SSBP4-203ENST00000593641 SCAF1Q9H7N4 1312 aaKnown RBP35.4■■■■□ 3.26
SSBP4-203ENST00000593641 TOM1O60784 492 aa35.4■■■■□ 3.26
SSBP4-203ENST00000593641 ARHGAP31Q2M1Z3 1444 aa35.4■■■■□ 3.26
SSBP4-203ENST00000593641 PIP4K2BP78356 416 aa35.35■■■■□ 3.25
SSBP4-203ENST00000593641 GRWD1Q9BQ67 446 aaKnown RBP eCLIP35.35■■■■□ 3.25
SSBP4-203ENST00000593641 KANK1Q14678 1352 aa35.35■■■■□ 3.25
SSBP4-203ENST00000593641 ANKRD30AQ9BXX3 1397 aa35.34■■■■□ 3.25
SSBP4-203ENST00000593641 SCAF11Q99590 1463 aaKnown RBP35.31■■■■□ 3.24
SSBP4-203ENST00000593641 STRCP1A6NGW2 1772 aa35.29■■■■□ 3.24
SSBP4-203ENST00000593641 CHIC2Q9UKJ5 165 aa35.29■■■■□ 3.24
SSBP4-203ENST00000593641 SOCS7O14512 581 aa35.28■■■■□ 3.24
SSBP4-203ENST00000593641 SYNMO15061 1565 aa35.28■■■■□ 3.24
SSBP4-203ENST00000593641 SLIT1O75093 1534 aa35.27■■■■□ 3.24
SSBP4-203ENST00000593641 ARHGAP23Q9P227 1491 aa35.26■■■■□ 3.23
SSBP4-203ENST00000593641 PIK3C2BO00750 1634 aa35.25■■■■□ 3.23
SSBP4-203ENST00000593641 HSPA1LP34931 641 aa35.25■■■■□ 3.23
SSBP4-203ENST00000593641 LMTK2Q8IWU2 1503 aa35.23■■■■□ 3.23
SSBP4-203ENST00000593641 TXNDC2Q86VQ3 553 aa35.22■■■■□ 3.23
SSBP4-203ENST00000593641 LRRC7Q96NW7 1537 aa35.22■■■■□ 3.23
SSBP4-203ENST00000593641 EID1Q9Y6B2 187 aa35.21■■■■□ 3.23
SSBP4-203ENST00000593641 STAG3Q9UJ98 1225 aa35.2■■■■□ 3.23
SSBP4-203ENST00000593641 LTKP29376 864 aa35.19■■■■□ 3.22
SSBP4-203ENST00000593641 KDM5AP29375 1690 aaKnown RBP35.18■■■■□ 3.22
SSBP4-203ENST00000593641 ADGRL2O95490 1459 aa35.18■■■■□ 3.22
SSBP4-203ENST00000593641 ALKQ9UM73 1620 aa35.17■■■■□ 3.22
SSBP4-203ENST00000593641 FAM50AQ14320 339 aaKnown RBP35.16■■■■□ 3.22
SSBP4-203ENST00000593641 EFCAB6Q5THR3 1501 aa35.15■■■■□ 3.22
SSBP4-203ENST00000593641 TMEM2Q9UHN6 1383 aa35.14■■■■□ 3.22
SSBP4-203ENST00000593641 MED1Q15648 1581 aaPredicted RBP35.11■■■■□ 3.21
SSBP4-203ENST00000593641 IDI1Q13907 227 aa35.08■■■■□ 3.21
SSBP4-203ENST00000593641 NOS1P29475 1434 aa35.06■■■■□ 3.2
SSBP4-203ENST00000593641 ANKRD50Q9ULJ7 1429 aa35.06■■■■□ 3.2
SSBP4-203ENST00000593641 ADGRB3O60242 1522 aa35.04■■■■□ 3.2
SSBP4-203ENST00000593641 XIRP1Q702N8 1843 aaKnown RBP35.02■■■■□ 3.2
SSBP4-203ENST00000593641 RPRD2Q5VT52 1461 aaKnown RBP35.02■■■■□ 3.2
SSBP4-203ENST00000593641 SLC52A1Q9NWF4 448 aa35■■■■□ 3.19
SSBP4-203ENST00000593641 TET3O43151 1660 aa34.98■■■■□ 3.19
SSBP4-203ENST00000593641 SENP3Q9H4L4 574 aaPredicted RBP34.97■■■■□ 3.19
SSBP4-203ENST00000593641 GCC2Q8IWJ2 1684 aa34.94■■■■□ 3.18
SSBP4-203ENST00000593641 MYO5BQ9ULV0 1848 aa34.91■■■■□ 3.18
SSBP4-203ENST00000593641 UNC13BO14795 1591 aa34.91■■■■□ 3.18
SSBP4-203ENST00000593641 SLC26A8Q96RN1 970 aa34.9■■■■□ 3.18
SSBP4-203ENST00000593641 PHF23Q9BUL5 403 aaPredicted RBP34.9■■■■□ 3.18
SSBP4-203ENST00000593641 KCNA6P17658 529 aa34.89■■■■□ 3.18
SSBP4-203ENST00000593641 BCANQ96GW7 911 aa34.87■■■■□ 3.17
SSBP4-203ENST00000593641 TMEM94Q12767 1356 aa34.87■■■■□ 3.17
Retrieved 100 of 20,778 RNA–protein pairs in 7.4 ms