RNA–Protein interactions for RNA: ENST00000593205.5

BECN1-220, Transcript of beclin 1, humanhuman

TSL 3

Gene BECN1, Length 629 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BECN1-220ENST00000593205 RNF17Q9BXT8 1623 aaKnown RBP24.17■■□□□ 1.46
BECN1-220ENST00000593205 SHANK2Q9UPX8 1470 aa24.16■■□□□ 1.46
BECN1-220ENST00000593205 FBXO31Q5XUX0 539 aaPredicted RBP24.16■■□□□ 1.46
BECN1-220ENST00000593205 DAPK1P53355 1430 aa24.16■■□□□ 1.46
BECN1-220ENST00000593205 DNMT1P26358 1616 aaKnown RBP24.15■■□□□ 1.46
BECN1-220ENST00000593205 NCOA1Q15788 1441 aa24.15■■□□□ 1.46
BECN1-220ENST00000593205 FAM135AQ9P2D6 1515 aa24.15■■□□□ 1.46
BECN1-220ENST00000593205 ZNF142P52746 1687 aaPredicted RBP24.15■■□□□ 1.46
BECN1-220ENST00000593205 WASHC2CQ9Y4E1 1318 aa24.14■■□□□ 1.46
BECN1-220ENST00000593205 MROH1Q8NDA8 1641 aa24.14■■□□□ 1.46
BECN1-220ENST00000593205 CAMSAP1Q5T5Y3 1602 aa24.13■■□□□ 1.45
BECN1-220ENST00000593205 EIF2AK4Q9P2K8 1649 aaKnown RBP24.13■■□□□ 1.45
BECN1-220ENST00000593205 PZPP20742 1482 aa24.13■■□□□ 1.45
BECN1-220ENST00000593205 CEP170BQ9Y4F5 1589 aaPredicted RBP24.12■■□□□ 1.45
BECN1-220ENST00000593205 DUOX2Q9NRD8 1548 aa24.12■■□□□ 1.45
BECN1-220ENST00000593205 KIF15Q9NS87 1388 aa24.11■■□□□ 1.45
BECN1-220ENST00000593205 RRP7BPQ9NSQ0 103 aa24.1■■□□□ 1.45
BECN1-220ENST00000593205 ABCC3O15438 1527 aa24.1■■□□□ 1.45
BECN1-220ENST00000593205 FBXO41Q8TF61 875 aa24.09■■□□□ 1.45
BECN1-220ENST00000593205 DMRT2Q9Y5R5 561 aa24.09■■□□□ 1.45
BECN1-220ENST00000593205 PTPRTO14522 1441 aa24.09■■□□□ 1.45
BECN1-220ENST00000593205 CHIC2Q9UKJ5 165 aa24.07■■□□□ 1.44
BECN1-220ENST00000593205 TNRQ92752 1358 aa24.06■■□□□ 1.44
BECN1-220ENST00000593205 NCKAP5LQ9HCH0 1330 aa24.06■■□□□ 1.44
BECN1-220ENST00000593205 A2ML1A8K2U0 1454 aa24.06■■□□□ 1.44
BECN1-220ENST00000593205 ERBINQ96RT1 1412 aa24.04■■□□□ 1.44
BECN1-220ENST00000593205 CERKQ8TCT0 537 aa24.04■■□□□ 1.44
BECN1-220ENST00000593205 ZC3H13Q5T200 1668 aaKnown RBP24.04■■□□□ 1.44
BECN1-220ENST00000593205 CEP152O94986 1710 aa24.04■■□□□ 1.44
BECN1-220ENST00000593205 PLA2R1Q13018 1463 aa24.03■■□□□ 1.44
BECN1-220ENST00000593205 FAM50AQ14320 339 aaKnown RBP24.02■■□□□ 1.44
BECN1-220ENST00000593205 PRDM15P57071 1507 aaPredicted RBP24■■□□□ 1.43
BECN1-220ENST00000593205 ANKRD30AQ9BXX3 1397 aa23.99■■□□□ 1.43
BECN1-220ENST00000593205 ADGRL2O95490 1459 aa23.99■■□□□ 1.43
BECN1-220ENST00000593205 DEPDC5O75140 1603 aa23.99■■□□□ 1.43
BECN1-220ENST00000593205 PPARGC1BQ86YN6 1023 aaKnown RBP23.98■■□□□ 1.43
BECN1-220ENST00000593205 SPATA31D1Q6ZQQ2 1576 aa23.98■■□□□ 1.43
BECN1-220ENST00000593205 LTBP4Q8N2S1 1624 aa23.97■■□□□ 1.43
BECN1-220ENST00000593205 ERVK-7P63135 1459 aa23.96■■□□□ 1.43
BECN1-220ENST00000593205 NLRP1Q9C000 1473 aa23.95■■□□□ 1.42
BECN1-220ENST00000593205 PKD2Q13563 968 aa23.95■■□□□ 1.42
BECN1-220ENST00000593205 GRWD1Q9BQ67 446 aaKnown RBP eCLIP23.94■■□□□ 1.421e-6■□□□□ 11.3
BECN1-220ENST00000593205 CFAP65Q6ZU64 1925 aaKnown RBP23.93■■□□□ 1.42
BECN1-220ENST00000593205 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP23.91■■□□□ 1.42
BECN1-220ENST00000593205 NEURL4Q96JN8 1562 aa23.91■■□□□ 1.42
BECN1-220ENST00000593205 UGGT1Q9NYU2 1555 aa23.91■■□□□ 1.42
BECN1-220ENST00000593205 ARHGAP31Q2M1Z3 1444 aa23.91■■□□□ 1.42
BECN1-220ENST00000593205 VWDEQ8N2E2 1590 aa23.91■■□□□ 1.42
BECN1-220ENST00000593205 ZNF335Q9H4Z2 1342 aaPredicted RBP23.88■■□□□ 1.41
BECN1-220ENST00000593205 POLR1AO95602 1720 aaPredicted RBP23.88■■□□□ 1.41
BECN1-220ENST00000593205 LMTK2Q8IWU2 1503 aa23.87■■□□□ 1.41
BECN1-220ENST00000593205 THEMISQ8N1K5 641 aaPredicted RBP23.86■■□□□ 1.41
BECN1-220ENST00000593205 ANKRD50Q9ULJ7 1429 aa23.85■■□□□ 1.41
BECN1-220ENST00000593205 KANK1Q14678 1352 aa23.84■■□□□ 1.41
BECN1-220ENST00000593205 UBR1Q8IWV7 1749 aa23.82■■□□□ 1.4
BECN1-220ENST00000593205 ANKLE2Q86XL3 938 aa23.81■■□□□ 1.4
BECN1-220ENST00000593205 EFCAB6Q5THR3 1501 aa23.79■■□□□ 1.4
BECN1-220ENST00000593205 MED14O60244 1454 aa23.79■■□□□ 1.4
BECN1-220ENST00000593205 ROCK1Q13464 1354 aa23.78■■□□□ 1.4
BECN1-220ENST00000593205 ITGAEP38570 1179 aa23.77■■□□□ 1.4
BECN1-220ENST00000593205 SYNMO15061 1565 aa23.77■■□□□ 1.4
BECN1-220ENST00000593205 PIK3C2BO00750 1634 aa23.76■■□□□ 1.39
BECN1-220ENST00000593205 NPHP4O75161 1426 aaPredicted RBP23.76■■□□□ 1.39
BECN1-220ENST00000593205 IQSEC2Q5JU85 1478 aa23.75■■□□□ 1.39
BECN1-220ENST00000593205 NOS1P29475 1434 aa23.75■■□□□ 1.39
BECN1-220ENST00000593205 UNC13BO14795 1591 aa23.74■■□□□ 1.39
BECN1-220ENST00000593205 ARHGAP23Q9P227 1491 aa23.73■■□□□ 1.39
BECN1-220ENST00000593205 IQGAP1P46940 1657 aa23.73■■□□□ 1.39
BECN1-220ENST00000593205 LTKP29376 864 aa23.72■■□□□ 1.39
BECN1-220ENST00000593205 IDI1Q13907 227 aa23.72■■□□□ 1.39
BECN1-220ENST00000593205 SLIT1O75093 1534 aa23.72■■□□□ 1.39
BECN1-220ENST00000593205 RRBP1Q9P2E9 1410 aaKnown RBP23.71■■□□□ 1.39
BECN1-220ENST00000593205 TET3O43151 1660 aa23.7■■□□□ 1.38
BECN1-220ENST00000593205 SCAF11Q99590 1463 aaKnown RBP23.68■■□□□ 1.38
BECN1-220ENST00000593205 RPRD2Q5VT52 1461 aaKnown RBP23.67■■□□□ 1.38
BECN1-220ENST00000593205 KDM5AP29375 1690 aaKnown RBP23.66■■□□□ 1.38
BECN1-220ENST00000593205 TMEM2Q9UHN6 1383 aa23.65■■□□□ 1.38
BECN1-220ENST00000593205 GCC2Q8IWJ2 1684 aa23.65■■□□□ 1.38
BECN1-220ENST00000593205 TXNDC2Q86VQ3 553 aa23.65■■□□□ 1.38
BECN1-220ENST00000593205 IQGAP3Q86VI3 1631 aa23.65■■□□□ 1.38
BECN1-220ENST00000593205 STRCP1A6NGW2 1772 aa23.65■■□□□ 1.38
BECN1-220ENST00000593205 CPS1P31327 1500 aa23.64■■□□□ 1.37
BECN1-220ENST00000593205 E9PCH4 1651 aa23.64■■□□□ 1.37
BECN1-220ENST00000593205 ADGRB3O60242 1522 aa23.62■■□□□ 1.37
BECN1-220ENST00000593205 SLC52A1Q9NWF4 448 aa23.61■■□□□ 1.37
BECN1-220ENST00000593205 STAG3Q9UJ98 1225 aa23.61■■□□□ 1.37
BECN1-220ENST00000593205 NUP155O75694 1391 aa23.6■■□□□ 1.37
BECN1-220ENST00000593205 UBAP1LF5GYI3 381 aa23.59■■□□□ 1.37
BECN1-220ENST00000593205 EID1Q9Y6B2 187 aa23.58■■□□□ 1.37
BECN1-220ENST00000593205 MYO5BQ9ULV0 1848 aa23.56■■□□□ 1.36
BECN1-220ENST00000593205 NAIPQ13075 1403 aa23.56■■□□□ 1.36
BECN1-220ENST00000593205 TMEM131LA2VDJ0 1609 aa23.55■■□□□ 1.36
BECN1-220ENST00000593205 LRRC7Q96NW7 1537 aa23.54■■□□□ 1.36
BECN1-220ENST00000593205 ALKQ9UM73 1620 aa23.52■■□□□ 1.36
BECN1-220ENST00000593205 ZFYVE9O95405 1425 aa23.52■■□□□ 1.36
BECN1-220ENST00000593205 SLC26A8Q96RN1 970 aa23.49■■□□□ 1.35
BECN1-220ENST00000593205 RIMS2Q9UQ26 1411 aa23.47■■□□□ 1.35
BECN1-220ENST00000593205 HFM1A2PYH4 1435 aa23.46■■□□□ 1.35
BECN1-220ENST00000593205 SENP3Q9H4L4 574 aaPredicted RBP23.46■■□□□ 1.35
BECN1-220ENST00000593205 XIRP1Q702N8 1843 aaKnown RBP23.45■■□□□ 1.34
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms