RNA–Protein interactions for RNA: ENST00000593205.5

BECN1-220, Transcript of beclin 1, humanhuman

TSL 3

Gene BECN1, Length 629 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BECN1-220ENST00000593205 NISCHQ9Y2I1 1504 aa38.42■■■■□ 3.74
BECN1-220ENST00000593205 CCDC180Q9P1Z9 1646 aa34.26■■■■□ 3.08
BECN1-220ENST00000593205 ABCC9O60706 1549 aa33.98■■■■□ 3.03
BECN1-220ENST00000593205 RB1CC1Q8TDY2 1594 aa32.44■■■□□ 2.78
BECN1-220ENST00000593205 NACADO15069 1562 aa32.31■■■□□ 2.76
BECN1-220ENST00000593205 DCAF8L2P0C7V8 631 aa32.23■■■□□ 2.75
BECN1-220ENST00000593205 MYO15BQ96JP2 1530 aa31.99■■■□□ 2.71
BECN1-220ENST00000593205 ZCCHC6Q5VYS8 1495 aaKnown RBP31.93■■■□□ 2.7
BECN1-220ENST00000593205 UNC13AQ9UPW8 1703 aa31.79■■■□□ 2.68
BECN1-220ENST00000593205 DCAF1Q9Y4B6 1507 aa31.73■■■□□ 2.67
BECN1-220ENST00000593205 PABPN1Q86U42 306 aaKnown RBP eCLIP31.71■■■□□ 2.67
BECN1-220ENST00000593205 DNAJC5BQ9UF47 199 aa31.64■■■□□ 2.66
BECN1-220ENST00000593205 BICRAQ9NZM4 1560 aa31.59■■■□□ 2.65
BECN1-220ENST00000593205 SCRIBQ14160 1630 aa31.3■■■□□ 2.6
BECN1-220ENST00000593205 SHROOM4Q9ULL8 1493 aa31.06■■■□□ 2.56
BECN1-220ENST00000593205 EIF4G1Q04637 1599 aaKnown RBP30.73■■■□□ 2.51
BECN1-220ENST00000593205 CC2D2AQ9P2K1 1620 aa30.71■■■□□ 2.51
BECN1-220ENST00000593205 CECR2Q9BXF3 1484 aa30.55■■■□□ 2.48
BECN1-220ENST00000593205 SMARCA4P51532 1647 aa29.89■■■□□ 2.38
BECN1-220ENST00000593205 NCAPD3P42695 1498 aa29.86■■■□□ 2.37
BECN1-220ENST00000593205 ATAD2BQ9ULI0 1458 aa29.83■■■□□ 2.37
BECN1-220ENST00000593205 BAZ1AQ9NRL2 1556 aaPredicted RBP29.75■■■□□ 2.35
BECN1-220ENST00000593205 SMARCA2P51531 1590 aa29.71■■■□□ 2.35
BECN1-220ENST00000593205 HMGXB3Q12766 1538 aa29.65■■■□□ 2.34
BECN1-220ENST00000593205 MROH2BQ7Z745 1585 aa29.64■■■□□ 2.34
BECN1-220ENST00000593205 PEG3Q9GZU2 1588 aa29.6■■■□□ 2.33
BECN1-220ENST00000593205 BAZ1BQ9UIG0 1483 aaKnown RBP29.53■■■□□ 2.32
BECN1-220ENST00000593205 NESP48681 1621 aa29.34■■■□□ 2.29
BECN1-220ENST00000593205 WIZO95785 1651 aa29.3■■■□□ 2.28
BECN1-220ENST00000593205 ERCC6Q03468 1493 aa29.24■■■□□ 2.27
BECN1-220ENST00000593205 RSF1Q96T23 1441 aaPredicted RBP29.15■■■□□ 2.26
BECN1-220ENST00000593205 LAMC3Q9Y6N6 1575 aa29.09■■■□□ 2.25
BECN1-220ENST00000593205 CUX2O14529 1486 aa29.07■■■□□ 2.24
BECN1-220ENST00000593205 CADPSQ9ULU8 1353 aa28.96■■■□□ 2.23
BECN1-220ENST00000593205 KIF21AQ7Z4S6 1674 aa28.93■■■□□ 2.22
BECN1-220ENST00000593205 THOC2Q8NI27 1593 aaKnown RBP28.93■■■□□ 2.22
BECN1-220ENST00000593205 TOP2AP11388 1531 aaKnown RBP28.91■■■□□ 2.22
BECN1-220ENST00000593205 PDS5BQ9NTI5 1447 aa28.89■■■□□ 2.22
BECN1-220ENST00000593205 CFTRP13569 1480 aa28.72■■■□□ 2.19
BECN1-220ENST00000593205 DNAJC5Q9H3Z4 198 aa28.69■■■□□ 2.18
BECN1-220ENST00000593205 MRC2Q9UBG0 1479 aa28.66■■■□□ 2.18
BECN1-220ENST00000593205 FANCD2Q9BXW9 1451 aa28.64■■■□□ 2.17
BECN1-220ENST00000593205 CCDC88BA6NC98 1476 aa28.61■■■□□ 2.17
BECN1-220ENST00000593205 CEP164Q9UPV0 1460 aa28.6■■■□□ 2.17
BECN1-220ENST00000593205 WDR62O43379 1518 aa28.6■■■□□ 2.17
BECN1-220ENST00000593205 PRDM2Q13029 1718 aa28.43■■■□□ 2.14
BECN1-220ENST00000593205 URB2Q14146 1524 aaKnown RBP28.42■■■□□ 2.14
BECN1-220ENST00000593205 TOPBP1Q92547 1522 aa28.14■■■□□ 2.1
BECN1-220ENST00000593205 SUPT5HO00267 1087 aaKnown RBP28.1■■■□□ 2.09
BECN1-220ENST00000593205 DNMBPQ6XZF7 1577 aa28.05■■■□□ 2.08
BECN1-220ENST00000593205 ABCC8Q09428 1581 aa28.03■■■□□ 2.08
BECN1-220ENST00000593205 ZNF608Q9ULD9 1512 aaPredicted RBP28.02■■■□□ 2.08
BECN1-220ENST00000593205 IFT140Q96RY7 1462 aa28.02■■■□□ 2.08
BECN1-220ENST00000593205 POLA1P09884 1462 aaPredicted RBP27.89■■■□□ 2.06
BECN1-220ENST00000593205 TARBP1Q13395 1621 aaKnown RBP27.89■■■□□ 2.06
BECN1-220ENST00000593205 EIF4G3O43432 1585 aaKnown RBP27.84■■■□□ 2.05
BECN1-220ENST00000593205 CUX1P39880 1505 aa27.82■■■□□ 2.04
BECN1-220ENST00000593205 OSCARQ8IYS5 282 aa27.81■■■□□ 2.04
BECN1-220ENST00000593205 RAD54L2Q9Y4B4 1467 aa27.81■■■□□ 2.04
BECN1-220ENST00000593205 AQRO60306 1485 aaKnown RBP eCLIP27.79■■■□□ 2.043e-9■■■■□ 25.8
BECN1-220ENST00000593205 FGD5Q6ZNL6 1462 aa27.76■■■□□ 2.04
BECN1-220ENST00000593205 SOGA1O94964 1423 aa27.74■■■□□ 2.03
BECN1-220ENST00000593205 TDRD9Q8NDG6 1382 aaKnown RBP27.67■■■□□ 2.02
BECN1-220ENST00000593205 TRIM41Q8WV44 630 aa27.57■■■□□ 2
BECN1-220ENST00000593205 CHD1O14646 1710 aa27.57■■■□□ 2
BECN1-220ENST00000593205 WDR97A6NE52 1622 aa27.56■■■□□ 2
BECN1-220ENST00000593205 SNAPC4Q5SXM2 1469 aa27.5■■□□□ 1.99
BECN1-220ENST00000593205 FBLN2P98095 1184 aa27.47■■□□□ 1.99
BECN1-220ENST00000593205 RIMBP3CA6NJZ7 1639 aa27.46■■□□□ 1.99
BECN1-220ENST00000593205 RIMBP3BA6NNM3 1639 aa27.46■■□□□ 1.99
BECN1-220ENST00000593205 RIMBP3Q9UFD9 1639 aa27.46■■□□□ 1.99
BECN1-220ENST00000593205 SYNJ1O43426 1573 aa27.46■■□□□ 1.99
BECN1-220ENST00000593205 WRNQ14191 1432 aaPredicted RBP eCLIP27.45■■□□□ 1.98
BECN1-220ENST00000593205 ABCA10Q8WWZ4 1543 aa27.45■■□□□ 1.98
BECN1-220ENST00000593205 GRIN2BQ13224 1484 aa27.44■■□□□ 1.98
BECN1-220ENST00000593205 TOP2BQ02880 1626 aa27.44■■□□□ 1.98
BECN1-220ENST00000593205 BIVM-ERCC5R4GMW8 1640 aa27.44■■□□□ 1.98
BECN1-220ENST00000593205 GAPVD1Q14C86 1478 aa27.41■■□□□ 1.98
BECN1-220ENST00000593205 ARHGEF11O15085 1522 aa27.41■■□□□ 1.98
BECN1-220ENST00000593205 MAGI1Q96QZ7 1491 aaPredicted RBP27.4■■□□□ 1.98
BECN1-220ENST00000593205 ABCA5Q8WWZ7 1642 aa27.4■■□□□ 1.98
BECN1-220ENST00000593205 PBRM1Q86U86 1689 aa27.39■■□□□ 1.97
BECN1-220ENST00000593205 CHMP7Q8WUX9 453 aaPredicted RBP27.32■■□□□ 1.96
BECN1-220ENST00000593205 SYNJ2O15056 1496 aa27.32■■□□□ 1.96
BECN1-220ENST00000593205 CLASP1Q7Z460 1538 aa27.27■■□□□ 1.96
BECN1-220ENST00000593205 ARAP1Q96P48 1450 aa27.19■■□□□ 1.94
BECN1-220ENST00000593205 CYB5RLQ6IPT4 315 aa27.17■■□□□ 1.94
BECN1-220ENST00000593205 ADAMTS12P58397 1594 aa27.15■■□□□ 1.94
BECN1-220ENST00000593205 GRIN2AQ12879 1464 aa27.12■■□□□ 1.93
BECN1-220ENST00000593205 ERICH3Q5RHP9 1530 aa27.1■■□□□ 1.93
BECN1-220ENST00000593205 FHAD1B1AJZ9 1412 aa27.07■■□□□ 1.92
BECN1-220ENST00000593205 CEP170Q5SW79 1584 aa27.04■■□□□ 1.92
BECN1-220ENST00000593205 NUP160Q12769 1436 aa27.02■■□□□ 1.92
BECN1-220ENST00000593205 ERCC6L2Q5T890 1561 aa26.93■■□□□ 1.9
BECN1-220ENST00000593205 IGF1RP08069 1367 aa26.88■■□□□ 1.89
BECN1-220ENST00000593205 KIF27Q86VH2 1401 aa26.87■■□□□ 1.89
BECN1-220ENST00000593205 SHROOM2Q13796 1616 aa26.87■■□□□ 1.89
BECN1-220ENST00000593205 RUSC2Q8N2Y8 1516 aa26.77■■□□□ 1.88
BECN1-220ENST00000593205 CUL7Q14999 1698 aa26.75■■□□□ 1.87
BECN1-220ENST00000593205 JPH4Q96JJ6 628 aa26.73■■□□□ 1.87
Retrieved 100 of 20,778 RNA–protein pairs in 9.4 ms