RNA–Protein interactions for RNA: ENST00000593128.5

CIRBP-243, Transcript of cold inducible RNA binding protein, humanhuman

TSL 3

Gene CIRBP, Length 796 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CIRBP-243ENST00000593128 WASHC2CQ9Y4E1 1318 aa28.2■■■□□ 2.11
CIRBP-243ENST00000593128 MYOM3Q5VTT5 1437 aa28.2■■■□□ 2.11
CIRBP-243ENST00000593128 KDM5DQ9BY66 1539 aa28.2■■■□□ 2.1
CIRBP-243ENST00000593128 FBXO31Q5XUX0 539 aaPredicted RBP28.17■■■□□ 2.1
CIRBP-243ENST00000593128 MIA2Q96PC5 1412 aa28.14■■■□□ 2.1
CIRBP-243ENST00000593128 MAST1Q9Y2H9 1570 aa28.14■■■□□ 2.1
CIRBP-243ENST00000593128 TNRQ92752 1358 aa28.13■■■□□ 2.09
CIRBP-243ENST00000593128 A2ML1A8K2U0 1454 aa28.11■■■□□ 2.09
CIRBP-243ENST00000593128 PZPP20742 1482 aa28.11■■■□□ 2.09
CIRBP-243ENST00000593128 DNMT1P26358 1616 aaKnown RBP28.1■■■□□ 2.09
CIRBP-243ENST00000593128 PLA2R1Q13018 1463 aa28.1■■■□□ 2.09
CIRBP-243ENST00000593128 FAM135AQ9P2D6 1515 aa28.1■■■□□ 2.09
CIRBP-243ENST00000593128 LTBP4Q8N2S1 1624 aa28.1■■■□□ 2.09
CIRBP-243ENST00000593128 PKD2Q13563 968 aa28.09■■■□□ 2.09
CIRBP-243ENST00000593128 PTPN23Q9H3S7 1636 aa28.07■■■□□ 2.08
CIRBP-243ENST00000593128 RNF17Q9BXT8 1623 aaKnown RBP28.07■■■□□ 2.08
CIRBP-243ENST00000593128 ZNF335Q9H4Z2 1342 aaPredicted RBP28.06■■■□□ 2.08
CIRBP-243ENST00000593128 TCOF1Q13428 1488 aaKnown RBP28.05■■■□□ 2.08
CIRBP-243ENST00000593128 EIF2AK4Q9P2K8 1649 aaKnown RBP28.04■■■□□ 2.08
CIRBP-243ENST00000593128 CROCC2H7BZ55 1655 aa28.03■■■□□ 2.08
CIRBP-243ENST00000593128 ZC3H13Q5T200 1668 aaKnown RBP28.02■■■□□ 2.08
CIRBP-243ENST00000593128 ABCC3O15438 1527 aa28.02■■■□□ 2.08
CIRBP-243ENST00000593128 CEP152O94986 1710 aa28.01■■■□□ 2.07
CIRBP-243ENST00000593128 POLR1AO95602 1720 aaPredicted RBP28.01■■■□□ 2.07
CIRBP-243ENST00000593128 DUOX2Q9NRD8 1548 aa28.01■■■□□ 2.07
CIRBP-243ENST00000593128 RRP7BPQ9NSQ0 103 aa28■■■□□ 2.07
CIRBP-243ENST00000593128 KIF15Q9NS87 1388 aa27.99■■■□□ 2.07
CIRBP-243ENST00000593128 ABCC5O15440 1437 aa27.98■■■□□ 2.07
CIRBP-243ENST00000593128 CFAP65Q6ZU64 1925 aaKnown RBP27.98■■■□□ 2.07
CIRBP-243ENST00000593128 MROH1Q8NDA8 1641 aa27.96■■■□□ 2.07
CIRBP-243ENST00000593128 FGD6Q6ZV73 1430 aa27.96■■■□□ 2.07
CIRBP-243ENST00000593128 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP27.96■■■□□ 2.075e-6■■■□□ 18.7
CIRBP-243ENST00000593128 UGGT1Q9NYU2 1555 aa27.95■■■□□ 2.07
CIRBP-243ENST00000593128 NLRP1Q9C000 1473 aa27.95■■■□□ 2.06
CIRBP-243ENST00000593128 SHANK2Q9UPX8 1470 aa27.95■■■□□ 2.06
CIRBP-243ENST00000593128 DAPK1P53355 1430 aa27.94■■■□□ 2.06
CIRBP-243ENST00000593128 THEMISQ8N1K5 641 aaPredicted RBP27.94■■■□□ 2.06
CIRBP-243ENST00000593128 GRWD1Q9BQ67 446 aaKnown RBP eCLIP27.94■■■□□ 2.06
CIRBP-243ENST00000593128 CHIC2Q9UKJ5 165 aa27.94■■■□□ 2.06
CIRBP-243ENST00000593128 IQSEC2Q5JU85 1478 aa27.94■■■□□ 2.06
CIRBP-243ENST00000593128 ANKLE2Q86XL3 938 aa27.92■■■□□ 2.06
CIRBP-243ENST00000593128 NEURL4Q96JN8 1562 aa27.91■■■□□ 2.06
CIRBP-243ENST00000593128 SPATA31D1Q6ZQQ2 1576 aa27.9■■■□□ 2.06
CIRBP-243ENST00000593128 ERVK-7P63135 1459 aa27.89■■■□□ 2.06
CIRBP-243ENST00000593128 UBAP1LF5GYI3 381 aa27.89■■■□□ 2.06
CIRBP-243ENST00000593128 ERBINQ96RT1 1412 aa27.88■■■□□ 2.05
CIRBP-243ENST00000593128 FAM50AQ14320 339 aaKnown RBP27.86■■■□□ 2.05
CIRBP-243ENST00000593128 PRDM15P57071 1507 aaPredicted RBP27.85■■■□□ 2.05
CIRBP-243ENST00000593128 ANKRD30AQ9BXX3 1397 aa27.85■■■□□ 2.05
CIRBP-243ENST00000593128 NPHP4O75161 1426 aaPredicted RBP27.83■■■□□ 2.05
CIRBP-243ENST00000593128 KANK1Q14678 1352 aa27.82■■■□□ 2.04
CIRBP-243ENST00000593128 DEPDC5O75140 1603 aa27.8■■■□□ 2.04
CIRBP-243ENST00000593128 IQGAP1P46940 1657 aa27.8■■■□□ 2.04
CIRBP-243ENST00000593128 DISP3Q9P2K9 1392 aa27.79■■■□□ 2.04
CIRBP-243ENST00000593128 UBR1Q8IWV7 1749 aa27.78■■■□□ 2.04
CIRBP-243ENST00000593128 SCAF1Q9H7N4 1312 aaKnown RBP27.78■■■□□ 2.04
CIRBP-243ENST00000593128 CPS1P31327 1500 aa27.76■■■□□ 2.03
CIRBP-243ENST00000593128 MED14O60244 1454 aa27.75■■■□□ 2.03
CIRBP-243ENST00000593128 VWDEQ8N2E2 1590 aa27.74■■■□□ 2.03
CIRBP-243ENST00000593128 ARHGAP31Q2M1Z3 1444 aa27.73■■■□□ 2.03
CIRBP-243ENST00000593128 PIP4K2BP78356 416 aa27.72■■■□□ 2.03
CIRBP-243ENST00000593128 STAG3Q9UJ98 1225 aa27.71■■■□□ 2.03
CIRBP-243ENST00000593128 PIK3C2BO00750 1634 aa27.7■■■□□ 2.02
CIRBP-243ENST00000593128 ADGRL2O95490 1459 aa27.68■■■□□ 2.02
CIRBP-243ENST00000593128 TXNDC2Q86VQ3 553 aa27.67■■■□□ 2.02
CIRBP-243ENST00000593128 SCAF11Q99590 1463 aaKnown RBP27.67■■■□□ 2.02
CIRBP-243ENST00000593128 TOM1O60784 492 aa27.65■■■□□ 2.02
CIRBP-243ENST00000593128 PPARGC1BQ86YN6 1023 aaKnown RBP27.65■■■□□ 2.02
CIRBP-243ENST00000593128 STRCP1A6NGW2 1772 aa27.64■■■□□ 2.02
CIRBP-243ENST00000593128 LMTK2Q8IWU2 1503 aa27.64■■■□□ 2.02
CIRBP-243ENST00000593128 EID1Q9Y6B2 187 aa27.64■■■□□ 2.02
CIRBP-243ENST00000593128 LTKP29376 864 aa27.63■■■□□ 2.01
CIRBP-243ENST00000593128 EFCAB6Q5THR3 1501 aa27.62■■■□□ 2.01
CIRBP-243ENST00000593128 ANKRD50Q9ULJ7 1429 aa27.62■■■□□ 2.01
CIRBP-243ENST00000593128 SLIT1O75093 1534 aa27.61■■■□□ 2.01
CIRBP-243ENST00000593128 ARHGAP23Q9P227 1491 aa27.6■■■□□ 2.01
CIRBP-243ENST00000593128 SYNMO15061 1565 aa27.6■■■□□ 2.01
CIRBP-243ENST00000593128 ITGAEP38570 1179 aa27.59■■■□□ 2.01
CIRBP-243ENST00000593128 IDI1Q13907 227 aa27.59■■■□□ 2.01
CIRBP-243ENST00000593128 ILDR2Q71H61 639 aa27.57■■■□□ 2
CIRBP-243ENST00000593128 SENP3Q9H4L4 574 aaPredicted RBP27.57■■■□□ 2
CIRBP-243ENST00000593128 HSPA1LP34931 641 aa27.56■■■□□ 2
CIRBP-243ENST00000593128 TMEM2Q9UHN6 1383 aa27.56■■■□□ 2
CIRBP-243ENST00000593128 LRRC7Q96NW7 1537 aa27.55■■■□□ 2
CIRBP-243ENST00000593128 KDM5AP29375 1690 aaKnown RBP27.52■■■□□ 2
CIRBP-243ENST00000593128 NOS1P29475 1434 aa27.51■■□□□ 1.99
CIRBP-243ENST00000593128 BCANQ96GW7 911 aa27.51■■□□□ 1.99
CIRBP-243ENST00000593128 TET3O43151 1660 aa27.51■■□□□ 1.99
CIRBP-243ENST00000593128 ADGRB3O60242 1522 aa27.51■■□□□ 1.99
CIRBP-243ENST00000593128 GCC2Q8IWJ2 1684 aa27.48■■□□□ 1.99
CIRBP-243ENST00000593128 UNC13BO14795 1591 aa27.48■■□□□ 1.99
CIRBP-243ENST00000593128 SLC52A1Q9NWF4 448 aa27.47■■□□□ 1.99
CIRBP-243ENST00000593128 RPRD2Q5VT52 1461 aaKnown RBP27.46■■□□□ 1.99
CIRBP-243ENST00000593128 ALKQ9UM73 1620 aa27.46■■□□□ 1.99
CIRBP-243ENST00000593128 SLC26A8Q96RN1 970 aa27.46■■□□□ 1.99
CIRBP-243ENST00000593128 MYO5BQ9ULV0 1848 aa27.46■■□□□ 1.99
CIRBP-243ENST00000593128 CHGAP10645 457 aaKnown RBP27.44■■□□□ 1.98
CIRBP-243ENST00000593128 ROCK1Q13464 1354 aa27.43■■□□□ 1.98
CIRBP-243ENST00000593128 XIRP1Q702N8 1843 aaKnown RBP27.41■■□□□ 1.98
CIRBP-243ENST00000593128 E9PCH4 1651 aa27.4■■□□□ 1.98
Retrieved 100 of 20,778 RNA–protein pairs in 42.6 ms