RNA–Protein interactions for RNA: ENST00000592159.1

KDM4B-209, Transcript of lysine demethylase 4B, humanhuman

TSL 3

Gene KDM4B, Length 411 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KDM4B-209ENST00000592159 PLA2R1Q13018 1463 aa14.7□□□□□ -0.06
KDM4B-209ENST00000592159 PIP4K2BP78356 416 aa14.7□□□□□ -0.06
KDM4B-209ENST00000592159 FBXO31Q5XUX0 539 aaPredicted RBP14.7□□□□□ -0.06
KDM4B-209ENST00000592159 DHX29Q7Z478 1369 aaKnown RBP14.7□□□□□ -0.06
KDM4B-209ENST00000592159 WASHC2CQ9Y4E1 1318 aa14.69□□□□□ -0.06
KDM4B-209ENST00000592159 INO80Q9ULG1 1556 aaPredicted RBP14.69□□□□□ -0.06
KDM4B-209ENST00000592159 CEP170BQ9Y4F5 1589 aaPredicted RBP14.69□□□□□ -0.06
KDM4B-209ENST00000592159 MYO3AQ8NEV4 1616 aa14.69□□□□□ -0.06
KDM4B-209ENST00000592159 ADGBQ8N7X0 1667 aa14.68□□□□□ -0.06
KDM4B-209ENST00000592159 TOM1O60784 492 aa14.68□□□□□ -0.06
KDM4B-209ENST00000592159 PLXNC1O60486 1568 aa14.68□□□□□ -0.06
KDM4B-209ENST00000592159 TSPY4P0CV99 314 aa14.67□□□□□ -0.06
KDM4B-209ENST00000592159 TSPY10P0CW01 314 aa14.67□□□□□ -0.06
KDM4B-209ENST00000592159 RSPH4AQ5TD94 716 aa14.67□□□□□ -0.06
KDM4B-209ENST00000592159 ANKLE2Q86XL3 938 aa14.67□□□□□ -0.06
KDM4B-209ENST00000592159 A2ML1A8K2U0 1454 aa14.67□□□□□ -0.06
KDM4B-209ENST00000592159 TCOF1Q13428 1488 aaKnown RBP14.67□□□□□ -0.06
KDM4B-209ENST00000592159 RTEL1-TNFRSF6BF6WH68 1400 aa14.66□□□□□ -0.06
KDM4B-209ENST00000592159 NCOA2Q15596 1464 aa14.66□□□□□ -0.06
KDM4B-209ENST00000592159 TNRQ92752 1358 aa14.66□□□□□ -0.06
KDM4B-209ENST00000592159 THEMISQ8N1K5 641 aaPredicted RBP14.66□□□□□ -0.06
KDM4B-209ENST00000592159 ZNF142P52746 1687 aaPredicted RBP14.65□□□□□ -0.06
KDM4B-209ENST00000592159 MBD5Q9P267 1494 aa14.65□□□□□ -0.06
KDM4B-209ENST00000592159 DNMT1P26358 1616 aaKnown RBP14.63□□□□□ -0.07
KDM4B-209ENST00000592159 HSPA1LP34931 641 aa14.63□□□□□ -0.07
KDM4B-209ENST00000592159 FAM50AQ14320 339 aaKnown RBP14.63□□□□□ -0.07
KDM4B-209ENST00000592159 RRBP1Q9P2E9 1410 aaKnown RBP14.63□□□□□ -0.07
KDM4B-209ENST00000592159 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP14.61□□□□□ -0.074e-6■■■□□ 14.8
KDM4B-209ENST00000592159 ITGAEP38570 1179 aa14.6□□□□□ -0.07
KDM4B-209ENST00000592159 MYOM3Q5VTT5 1437 aa14.59□□□□□ -0.07
KDM4B-209ENST00000592159 MIA2Q96PC5 1412 aa14.59□□□□□ -0.07
KDM4B-209ENST00000592159 CCDC141Q6ZP82 1450 aa14.59□□□□□ -0.07
KDM4B-209ENST00000592159 SHANK2Q9UPX8 1470 aa14.59□□□□□ -0.07
KDM4B-209ENST00000592159 FGD6Q6ZV73 1430 aa14.58□□□□□ -0.07
KDM4B-209ENST00000592159 PZPP20742 1482 aa14.57□□□□□ -0.08
KDM4B-209ENST00000592159 CPS1P31327 1500 aa14.57□□□□□ -0.08
KDM4B-209ENST00000592159 CAMSAP2Q08AD1 1489 aa14.57□□□□□ -0.08
KDM4B-209ENST00000592159 KDM5DQ9BY66 1539 aa14.56□□□□□ -0.08
KDM4B-209ENST00000592159 FAM135AQ9P2D6 1515 aa14.56□□□□□ -0.08
KDM4B-209ENST00000592159 POLR1AO95602 1720 aaPredicted RBP14.55□□□□□ -0.08
KDM4B-209ENST00000592159 NPHP4O75161 1426 aaPredicted RBP14.55□□□□□ -0.08
KDM4B-209ENST00000592159 UGGT1Q9NYU2 1555 aa14.55□□□□□ -0.08
KDM4B-209ENST00000592159 NLRP1Q9C000 1473 aa14.54□□□□□ -0.08
KDM4B-209ENST00000592159 PTPN23Q9H3S7 1636 aa14.52□□□□□ -0.08
KDM4B-209ENST00000592159 NEURL4Q96JN8 1562 aa14.52□□□□□ -0.08
KDM4B-209ENST00000592159 MED14O60244 1454 aa14.49□□□□□ -0.09
KDM4B-209ENST00000592159 CFAP65Q6ZU64 1925 aaKnown RBP14.49□□□□□ -0.09
KDM4B-209ENST00000592159 ARHGEF5Q12774 1597 aa14.48□□□□□ -0.09
KDM4B-209ENST00000592159 MED1Q15648 1581 aaPredicted RBP14.48□□□□□ -0.09
KDM4B-209ENST00000592159 TXNDC2Q86VQ3 553 aa14.48□□□□□ -0.09
KDM4B-209ENST00000592159 VWDEQ8N2E2 1590 aa14.47□□□□□ -0.09
KDM4B-209ENST00000592159 POTEDQ86YR6 584 aa14.47□□□□□ -0.09
KDM4B-209ENST00000592159 GRWD1Q9BQ67 446 aaKnown RBP eCLIP14.47□□□□□ -0.09
KDM4B-209ENST00000592159 STAG3Q9UJ98 1225 aa14.47□□□□□ -0.09
KDM4B-209ENST00000592159 EID1Q9Y6B2 187 aa14.47□□□□□ -0.09
KDM4B-209ENST00000592159 DEPDC5O75140 1603 aa14.47□□□□□ -0.09
KDM4B-209ENST00000592159 IQGAP1P46940 1657 aa14.45□□□□□ -0.1
KDM4B-209ENST00000592159 RRP7BPQ9NSQ0 103 aa14.44□□□□□ -0.1
KDM4B-209ENST00000592159 ABCC3O15438 1527 aa14.44□□□□□ -0.1
KDM4B-209ENST00000592159 LRRC7Q96NW7 1537 aa14.43□□□□□ -0.1
KDM4B-209ENST00000592159 LTKP29376 864 aa14.43□□□□□ -0.1
KDM4B-209ENST00000592159 ERVK-7P63135 1459 aa14.43□□□□□ -0.1
KDM4B-209ENST00000592159 CCER1Q8TC90 406 aaPredicted RBP14.42□□□□□ -0.1
KDM4B-209ENST00000592159 RNF17Q9BXT8 1623 aaKnown RBP14.41□□□□□ -0.1
KDM4B-209ENST00000592159 CHIC2Q9UKJ5 165 aa14.41□□□□□ -0.1
KDM4B-209ENST00000592159 MAST1Q9Y2H9 1570 aa14.41□□□□□ -0.1
KDM4B-209ENST00000592159 ZC3H13Q5T200 1668 aaKnown RBP14.41□□□□□ -0.1
KDM4B-209ENST00000592159 SCAF11Q99590 1463 aaKnown RBP14.39□□□□□ -0.11
KDM4B-209ENST00000592159 EIF2AK4Q9P2K8 1649 aaKnown RBP14.39□□□□□ -0.11
KDM4B-209ENST00000592159 DUOX2Q9NRD8 1548 aa14.39□□□□□ -0.11
KDM4B-209ENST00000592159 STRCP1A6NGW2 1772 aa14.39□□□□□ -0.11
KDM4B-209ENST00000592159 CEP152O94986 1710 aa14.38□□□□□ -0.11
KDM4B-209ENST00000592159 KANK1Q14678 1352 aa14.38□□□□□ -0.11
KDM4B-209ENST00000592159 BCANQ96GW7 911 aa14.38□□□□□ -0.11
KDM4B-209ENST00000592159 ALKQ9UM73 1620 aa14.37□□□□□ -0.11
KDM4B-209ENST00000592159 KIF15Q9NS87 1388 aa14.37□□□□□ -0.11
KDM4B-209ENST00000592159 DAPK1P53355 1430 aa14.37□□□□□ -0.11
KDM4B-209ENST00000592159 SETD5Q9C0A6 1442 aa14.37□□□□□ -0.11
KDM4B-209ENST00000592159 UBR1Q8IWV7 1749 aa14.37□□□□□ -0.11
KDM4B-209ENST00000592159 ABCC5O15440 1437 aa14.36□□□□□ -0.11
KDM4B-209ENST00000592159 PROSER2Q86WR7 435 aaPredicted RBP14.36□□□□□ -0.11
KDM4B-209ENST00000592159 RAB3GAP2Q9H2M9 1393 aa14.35□□□□□ -0.11
KDM4B-209ENST00000592159 HRCP23327 699 aa14.35□□□□□ -0.11
KDM4B-209ENST00000592159 IDI1Q13907 227 aa14.35□□□□□ -0.11
KDM4B-209ENST00000592159 SYNMO15061 1565 aa14.34□□□□□ -0.11
KDM4B-209ENST00000592159 ARHGAP31Q2M1Z3 1444 aa14.34□□□□□ -0.11
KDM4B-209ENST00000592159 SLC26A8Q96RN1 970 aa14.34□□□□□ -0.11
KDM4B-209ENST00000592159 MROH1Q8NDA8 1641 aa14.33□□□□□ -0.11
KDM4B-209ENST00000592159 ARHGAP23Q9P227 1491 aa14.33□□□□□ -0.12
KDM4B-209ENST00000592159 KCNA6P17658 529 aa14.33□□□□□ -0.12
KDM4B-209ENST00000592159 RBM33Q96EV2 1170 aaKnown RBP14.33□□□□□ -0.12
KDM4B-209ENST00000592159 TMEM2Q9UHN6 1383 aa14.33□□□□□ -0.12
KDM4B-209ENST00000592159 SLIT1O75093 1534 aa14.32□□□□□ -0.12
KDM4B-209ENST00000592159 RGS17Q9UGC6 210 aaPredicted RBP14.32□□□□□ -0.12
KDM4B-209ENST00000592159 ERBINQ96RT1 1412 aa14.32□□□□□ -0.12
KDM4B-209ENST00000592159 HFM1A2PYH4 1435 aa14.31□□□□□ -0.12
KDM4B-209ENST00000592159 TMEM94Q12767 1356 aa14.3□□□□□ -0.12
KDM4B-209ENST00000592159 ANKRD30AQ9BXX3 1397 aa14.3□□□□□ -0.12
KDM4B-209ENST00000592159 FAM135BQ49AJ0 1406 aa14.3□□□□□ -0.12
KDM4B-209ENST00000592159 CROCC2H7BZ55 1655 aa14.3□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 8.2 ms