RNA–Protein interactions for RNA: ENST00000590248.1

NEDD4L-228, Transcript of neural precursor cell expressed, developmentally down-regulated 4-like, E3 ubiquitin protein ligase, humanhuman

TSL 2

Gene NEDD4L, Length 730 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD4L-228ENST00000590248 RRP7BPQ9NSQ0 103 aa21.36■■□□□ 1.01
NEDD4L-228ENST00000590248 TCOF1Q13428 1488 aaKnown RBP21.35■■□□□ 1.01
NEDD4L-228ENST00000590248 PPARGC1BQ86YN6 1023 aaKnown RBP21.35■■□□□ 1.01
NEDD4L-228ENST00000590248 CHIC2Q9UKJ5 165 aa21.35■■□□□ 1.01
NEDD4L-228ENST00000590248 DAPK1P53355 1430 aa21.35■■□□□ 1.01
NEDD4L-228ENST00000590248 DNMT1P26358 1616 aaKnown RBP21.34■■□□□ 1.01
NEDD4L-228ENST00000590248 MYO3AQ8NEV4 1616 aa21.34■■□□□ 1.01
NEDD4L-228ENST00000590248 KDM5DQ9BY66 1539 aa21.34■■□□□ 1.01
NEDD4L-228ENST00000590248 FAM50AQ14320 339 aaKnown RBP21.32■■□□□ 1
NEDD4L-228ENST00000590248 CAMSAP1Q5T5Y3 1602 aa21.31■■□□□ 1
NEDD4L-228ENST00000590248 RNF17Q9BXT8 1623 aaKnown RBP21.31■■□□□ 1
NEDD4L-228ENST00000590248 DUOX2Q9NRD8 1548 aa21.3■■□□□ 1
NEDD4L-228ENST00000590248 EIF2AK4Q9P2K8 1649 aaKnown RBP21.3■■□□□ 1
NEDD4L-228ENST00000590248 KIF15Q9NS87 1388 aa21.3■■□□□ 1
NEDD4L-228ENST00000590248 SHANK2Q9UPX8 1470 aa21.3■■□□□ 1
NEDD4L-228ENST00000590248 DMRT2Q9Y5R5 561 aa21.29■■□□□ 1
NEDD4L-228ENST00000590248 CEP152O94986 1710 aa21.29■■□□□ 1
NEDD4L-228ENST00000590248 ZNF142P52746 1687 aaPredicted RBP21.28■■□□□ 1
NEDD4L-228ENST00000590248 CEP170BQ9Y4F5 1589 aaPredicted RBP21.28■■□□□ 1
NEDD4L-228ENST00000590248 MROH1Q8NDA8 1641 aa21.28■■□□□ 1
NEDD4L-228ENST00000590248 NCOA1Q15788 1441 aa21.28■■□□□ 1
NEDD4L-228ENST00000590248 NCKAP5LQ9HCH0 1330 aa21.28■■□□□ 1
NEDD4L-228ENST00000590248 PZPP20742 1482 aa21.27■■□□□ 1
NEDD4L-228ENST00000590248 ABCC3O15438 1527 aa21.26■□□□□ 0.99
NEDD4L-228ENST00000590248 TNRQ92752 1358 aa21.25■□□□□ 0.99
NEDD4L-228ENST00000590248 FAM135AQ9P2D6 1515 aa21.24■□□□□ 0.99
NEDD4L-228ENST00000590248 FBXO41Q8TF61 875 aa21.24■□□□□ 0.99
NEDD4L-228ENST00000590248 GRWD1Q9BQ67 446 aaKnown RBP eCLIP21.24■□□□□ 0.991e-6■□□□□ 11.2
NEDD4L-228ENST00000590248 CERKQ8TCT0 537 aa21.23■□□□□ 0.99
NEDD4L-228ENST00000590248 ZC3H13Q5T200 1668 aaKnown RBP21.23■□□□□ 0.99
NEDD4L-228ENST00000590248 ANKRD30AQ9BXX3 1397 aa21.23■□□□□ 0.99
NEDD4L-228ENST00000590248 PTPRTO14522 1441 aa21.22■□□□□ 0.99
NEDD4L-228ENST00000590248 A2ML1A8K2U0 1454 aa21.21■□□□□ 0.99
NEDD4L-228ENST00000590248 ERBINQ96RT1 1412 aa21.21■□□□□ 0.99
NEDD4L-228ENST00000590248 DEPDC5O75140 1603 aa21.16■□□□□ 0.98
NEDD4L-228ENST00000590248 PRDM15P57071 1507 aaPredicted RBP21.16■□□□□ 0.98
NEDD4L-228ENST00000590248 PLA2R1Q13018 1463 aa21.16■□□□□ 0.98
NEDD4L-228ENST00000590248 PKD2Q13563 968 aa21.15■□□□□ 0.98
NEDD4L-228ENST00000590248 SPATA31D1Q6ZQQ2 1576 aa21.14■□□□□ 0.98
NEDD4L-228ENST00000590248 ADGRL2O95490 1459 aa21.14■□□□□ 0.98
NEDD4L-228ENST00000590248 ITGAEP38570 1179 aa21.14■□□□□ 0.97
NEDD4L-228ENST00000590248 ERVK-7P63135 1459 aa21.13■□□□□ 0.97
NEDD4L-228ENST00000590248 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP21.13■□□□□ 0.97
NEDD4L-228ENST00000590248 POLR1AO95602 1720 aaPredicted RBP21.12■□□□□ 0.97
NEDD4L-228ENST00000590248 UGGT1Q9NYU2 1555 aa21.12■□□□□ 0.97
NEDD4L-228ENST00000590248 NLRP1Q9C000 1473 aa21.12■□□□□ 0.97
NEDD4L-228ENST00000590248 LTBP4Q8N2S1 1624 aa21.11■□□□□ 0.97
NEDD4L-228ENST00000590248 KANK1Q14678 1352 aa21.1■□□□□ 0.97
NEDD4L-228ENST00000590248 ZNF335Q9H4Z2 1342 aaPredicted RBP21.1■□□□□ 0.97
NEDD4L-228ENST00000590248 THEMISQ8N1K5 641 aaPredicted RBP21.1■□□□□ 0.97
NEDD4L-228ENST00000590248 ANKRD50Q9ULJ7 1429 aa21.09■□□□□ 0.97
NEDD4L-228ENST00000590248 NEURL4Q96JN8 1562 aa21.07■□□□□ 0.96
NEDD4L-228ENST00000590248 ARHGAP31Q2M1Z3 1444 aa21.07■□□□□ 0.96
NEDD4L-228ENST00000590248 VWDEQ8N2E2 1590 aa21.06■□□□□ 0.96
NEDD4L-228ENST00000590248 ANKLE2Q86XL3 938 aa21.06■□□□□ 0.96
NEDD4L-228ENST00000590248 UBR1Q8IWV7 1749 aa21.06■□□□□ 0.96
NEDD4L-228ENST00000590248 LMTK2Q8IWU2 1503 aa21.03■□□□□ 0.96
NEDD4L-228ENST00000590248 PIK3C2BO00750 1634 aa21■□□□□ 0.95
NEDD4L-228ENST00000590248 ROCK1Q13464 1354 aa20.99■□□□□ 0.95
NEDD4L-228ENST00000590248 EFCAB6Q5THR3 1501 aa20.99■□□□□ 0.95
NEDD4L-228ENST00000590248 IDI1Q13907 227 aa20.98■□□□□ 0.95
NEDD4L-228ENST00000590248 SYNMO15061 1565 aa20.97■□□□□ 0.95
NEDD4L-228ENST00000590248 NPHP4O75161 1426 aaPredicted RBP20.97■□□□□ 0.95
NEDD4L-228ENST00000590248 IQGAP1P46940 1657 aa20.96■□□□□ 0.95
NEDD4L-228ENST00000590248 LTKP29376 864 aa20.96■□□□□ 0.95
NEDD4L-228ENST00000590248 STAG3Q9UJ98 1225 aa20.96■□□□□ 0.95
NEDD4L-228ENST00000590248 UNC13BO14795 1591 aa20.96■□□□□ 0.95
NEDD4L-228ENST00000590248 MED14O60244 1454 aa20.95■□□□□ 0.94
NEDD4L-228ENST00000590248 TET3O43151 1660 aa20.95■□□□□ 0.94
NEDD4L-228ENST00000590248 RRBP1Q9P2E9 1410 aaKnown RBP20.95■□□□□ 0.94
NEDD4L-228ENST00000590248 TXNDC2Q86VQ3 553 aa20.94■□□□□ 0.94
NEDD4L-228ENST00000590248 NOS1P29475 1434 aa20.94■□□□□ 0.94
NEDD4L-228ENST00000590248 GCC2Q8IWJ2 1684 aa20.93■□□□□ 0.94
NEDD4L-228ENST00000590248 MYO5BQ9ULV0 1848 aa20.92■□□□□ 0.94
NEDD4L-228ENST00000590248 E9PCH4 1651 aa20.91■□□□□ 0.94
NEDD4L-228ENST00000590248 STRCP1A6NGW2 1772 aa20.9■□□□□ 0.94
NEDD4L-228ENST00000590248 SLIT1O75093 1534 aa20.9■□□□□ 0.94
NEDD4L-228ENST00000590248 IQSEC2Q5JU85 1478 aa20.9■□□□□ 0.94
NEDD4L-228ENST00000590248 SCAF11Q99590 1463 aaKnown RBP20.9■□□□□ 0.94
NEDD4L-228ENST00000590248 ARHGAP23Q9P227 1491 aa20.9■□□□□ 0.94
NEDD4L-228ENST00000590248 NUP155O75694 1391 aa20.89■□□□□ 0.93
NEDD4L-228ENST00000590248 IQGAP3Q86VI3 1631 aa20.89■□□□□ 0.93
NEDD4L-228ENST00000590248 RPRD2Q5VT52 1461 aaKnown RBP20.88■□□□□ 0.93
NEDD4L-228ENST00000590248 EID1Q9Y6B2 187 aa20.88■□□□□ 0.93
NEDD4L-228ENST00000590248 TMEM2Q9UHN6 1383 aa20.87■□□□□ 0.93
NEDD4L-228ENST00000590248 UBAP1LF5GYI3 381 aa20.87■□□□□ 0.93
NEDD4L-228ENST00000590248 SLC52A1Q9NWF4 448 aa20.87■□□□□ 0.93
NEDD4L-228ENST00000590248 KDM5AP29375 1690 aaKnown RBP20.86■□□□□ 0.93
NEDD4L-228ENST00000590248 SENP3Q9H4L4 574 aaPredicted RBP20.86■□□□□ 0.93
NEDD4L-228ENST00000590248 CPS1P31327 1500 aa20.84■□□□□ 0.93
NEDD4L-228ENST00000590248 ADGRB3O60242 1522 aa20.83■□□□□ 0.93
NEDD4L-228ENST00000590248 CHGAP10645 457 aaKnown RBP20.82■□□□□ 0.92
NEDD4L-228ENST00000590248 NAIPQ13075 1403 aa20.81■□□□□ 0.92
NEDD4L-228ENST00000590248 TMEM131LA2VDJ0 1609 aa20.8■□□□□ 0.92
NEDD4L-228ENST00000590248 SLC26A8Q96RN1 970 aa20.79■□□□□ 0.92
NEDD4L-228ENST00000590248 NUTM2DQ5VT03 806 aaPredicted RBP20.77■□□□□ 0.92
NEDD4L-228ENST00000590248 BCANQ96GW7 911 aa20.77■□□□□ 0.92
NEDD4L-228ENST00000590248 PIP4K2BP78356 416 aa20.76■□□□□ 0.91
NEDD4L-228ENST00000590248 LRRC7Q96NW7 1537 aa20.76■□□□□ 0.91
NEDD4L-228ENST00000590248 SCAF1Q9H7N4 1312 aaKnown RBP20.76■□□□□ 0.91
Retrieved 100 of 20,778 RNA–protein pairs in 66.7 ms