RNA–Protein interactions for RNA: ENST00000590248.1

NEDD4L-228, Transcript of neural precursor cell expressed, developmentally down-regulated 4-like, E3 ubiquitin protein ligase, humanhuman

TSL 2

Gene NEDD4L, Length 730 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD4L-228ENST00000590248 NISCHQ9Y2I1 1504 aa33.87■■■■□ 3.01
NEDD4L-228ENST00000590248 CCDC180Q9P1Z9 1646 aa30.2■■■□□ 2.43
NEDD4L-228ENST00000590248 ABCC9O60706 1549 aa29.98■■■□□ 2.39
NEDD4L-228ENST00000590248 RB1CC1Q8TDY2 1594 aa28.6■■■□□ 2.17
NEDD4L-228ENST00000590248 DCAF8L2P0C7V8 631 aa28.6■■■□□ 2.17
NEDD4L-228ENST00000590248 NACADO15069 1562 aa28.47■■■□□ 2.15
NEDD4L-228ENST00000590248 ZCCHC6Q5VYS8 1495 aaKnown RBP28.12■■■□□ 2.09
NEDD4L-228ENST00000590248 MYO15BQ96JP2 1530 aa28.12■■■□□ 2.09
NEDD4L-228ENST00000590248 UNC13AQ9UPW8 1703 aa28.1■■■□□ 2.09
NEDD4L-228ENST00000590248 PABPN1Q86U42 306 aaKnown RBP eCLIP28.02■■■□□ 2.08
NEDD4L-228ENST00000590248 DCAF1Q9Y4B6 1507 aa27.92■■■□□ 2.06
NEDD4L-228ENST00000590248 DNAJC5BQ9UF47 199 aa27.88■■■□□ 2.05
NEDD4L-228ENST00000590248 BICRAQ9NZM4 1560 aa27.81■■■□□ 2.04
NEDD4L-228ENST00000590248 SCRIBQ14160 1630 aa27.64■■■□□ 2.02
NEDD4L-228ENST00000590248 SHROOM4Q9ULL8 1493 aa27.28■■□□□ 1.96
NEDD4L-228ENST00000590248 CC2D2AQ9P2K1 1620 aa27.08■■□□□ 1.93
NEDD4L-228ENST00000590248 EIF4G1Q04637 1599 aaKnown RBP27.08■■□□□ 1.93
NEDD4L-228ENST00000590248 CECR2Q9BXF3 1484 aa26.93■■□□□ 1.9
NEDD4L-228ENST00000590248 SMARCA4P51532 1647 aa26.36■■□□□ 1.81
NEDD4L-228ENST00000590248 ATAD2BQ9ULI0 1458 aa26.3■■□□□ 1.8
NEDD4L-228ENST00000590248 NCAPD3P42695 1498 aa26.29■■□□□ 1.8
NEDD4L-228ENST00000590248 BAZ1AQ9NRL2 1556 aaPredicted RBP26.24■■□□□ 1.79
NEDD4L-228ENST00000590248 SMARCA2P51531 1590 aa26.19■■□□□ 1.78
NEDD4L-228ENST00000590248 MROH2BQ7Z745 1585 aa26.15■■□□□ 1.78
NEDD4L-228ENST00000590248 HMGXB3Q12766 1538 aa26.09■■□□□ 1.77
NEDD4L-228ENST00000590248 BAZ1BQ9UIG0 1483 aaKnown RBP26.04■■□□□ 1.76
NEDD4L-228ENST00000590248 PEG3Q9GZU2 1588 aa26.04■■□□□ 1.76
NEDD4L-228ENST00000590248 WIZO95785 1651 aa25.9■■□□□ 1.74
NEDD4L-228ENST00000590248 NESP48681 1621 aa25.88■■□□□ 1.73
NEDD4L-228ENST00000590248 ERCC6Q03468 1493 aa25.81■■□□□ 1.72
NEDD4L-228ENST00000590248 RSF1Q96T23 1441 aaPredicted RBP25.71■■□□□ 1.71
NEDD4L-228ENST00000590248 LAMC3Q9Y6N6 1575 aa25.65■■□□□ 1.7
NEDD4L-228ENST00000590248 CUX2O14529 1486 aa25.58■■□□□ 1.69
NEDD4L-228ENST00000590248 KIF21AQ7Z4S6 1674 aa25.55■■□□□ 1.68
NEDD4L-228ENST00000590248 CADPSQ9ULU8 1353 aa25.53■■□□□ 1.68
NEDD4L-228ENST00000590248 TOP2AP11388 1531 aaKnown RBP25.49■■□□□ 1.67
NEDD4L-228ENST00000590248 PDS5BQ9NTI5 1447 aa25.48■■□□□ 1.67
NEDD4L-228ENST00000590248 THOC2Q8NI27 1593 aaKnown RBP25.47■■□□□ 1.67
NEDD4L-228ENST00000590248 CFTRP13569 1480 aa25.29■■□□□ 1.64
NEDD4L-228ENST00000590248 DNAJC5Q9H3Z4 198 aa25.26■■□□□ 1.63
NEDD4L-228ENST00000590248 CCDC88BA6NC98 1476 aa25.25■■□□□ 1.63
NEDD4L-228ENST00000590248 FANCD2Q9BXW9 1451 aa25.25■■□□□ 1.63
NEDD4L-228ENST00000590248 MRC2Q9UBG0 1479 aa25.25■■□□□ 1.63
NEDD4L-228ENST00000590248 CEP164Q9UPV0 1460 aa25.22■■□□□ 1.63
NEDD4L-228ENST00000590248 WDR62O43379 1518 aa25.17■■□□□ 1.62
NEDD4L-228ENST00000590248 PRDM2Q13029 1718 aa25.14■■□□□ 1.61
NEDD4L-228ENST00000590248 URB2Q14146 1524 aaKnown RBP25.04■■□□□ 1.6
NEDD4L-228ENST00000590248 SUPT5HO00267 1087 aaKnown RBP24.95■■□□□ 1.58
NEDD4L-228ENST00000590248 TOPBP1Q92547 1522 aa24.81■■□□□ 1.56
NEDD4L-228ENST00000590248 DNMBPQ6XZF7 1577 aa24.73■■□□□ 1.55
NEDD4L-228ENST00000590248 ABCC8Q09428 1581 aa24.72■■□□□ 1.55
NEDD4L-228ENST00000590248 ZNF608Q9ULD9 1512 aaPredicted RBP24.7■■□□□ 1.54
NEDD4L-228ENST00000590248 IFT140Q96RY7 1462 aa24.69■■□□□ 1.54
NEDD4L-228ENST00000590248 POLA1P09884 1462 aaPredicted RBP24.58■■□□□ 1.53
NEDD4L-228ENST00000590248 TARBP1Q13395 1621 aaKnown RBP24.58■■□□□ 1.53
NEDD4L-228ENST00000590248 OSCARQ8IYS5 282 aa24.56■■□□□ 1.52
NEDD4L-228ENST00000590248 EIF4G3O43432 1585 aaKnown RBP24.55■■□□□ 1.52
NEDD4L-228ENST00000590248 RAD54L2Q9Y4B4 1467 aa24.55■■□□□ 1.52
NEDD4L-228ENST00000590248 AQRO60306 1485 aaKnown RBP eCLIP24.53■■□□□ 1.523e-8■■□□□ 13.5
NEDD4L-228ENST00000590248 CUX1P39880 1505 aa24.53■■□□□ 1.52
NEDD4L-228ENST00000590248 SOGA1O94964 1423 aa24.5■■□□□ 1.51
NEDD4L-228ENST00000590248 FGD5Q6ZNL6 1462 aa24.5■■□□□ 1.51
NEDD4L-228ENST00000590248 TDRD9Q8NDG6 1382 aaKnown RBP24.43■■□□□ 1.5
NEDD4L-228ENST00000590248 TRIM41Q8WV44 630 aa24.39■■□□□ 1.49
NEDD4L-228ENST00000590248 CHD1O14646 1710 aa24.37■■□□□ 1.49
NEDD4L-228ENST00000590248 FBLN2P98095 1184 aa24.34■■□□□ 1.49
NEDD4L-228ENST00000590248 WDR97A6NE52 1622 aa24.3■■□□□ 1.48
NEDD4L-228ENST00000590248 SNAPC4Q5SXM2 1469 aa24.26■■□□□ 1.47
NEDD4L-228ENST00000590248 SYNJ1O43426 1573 aa24.24■■□□□ 1.47
NEDD4L-228ENST00000590248 WRNQ14191 1432 aaPredicted RBP eCLIP24.23■■□□□ 1.47
NEDD4L-228ENST00000590248 RIMBP3CA6NJZ7 1639 aa24.22■■□□□ 1.47
NEDD4L-228ENST00000590248 RIMBP3BA6NNM3 1639 aa24.22■■□□□ 1.47
NEDD4L-228ENST00000590248 RIMBP3Q9UFD9 1639 aa24.22■■□□□ 1.47
NEDD4L-228ENST00000590248 BIVM-ERCC5R4GMW8 1640 aa24.21■■□□□ 1.47
NEDD4L-228ENST00000590248 PBRM1Q86U86 1689 aa24.21■■□□□ 1.47
NEDD4L-228ENST00000590248 TOP2BQ02880 1626 aa24.21■■□□□ 1.47
NEDD4L-228ENST00000590248 GRIN2BQ13224 1484 aa24.19■■□□□ 1.46
NEDD4L-228ENST00000590248 ABCA10Q8WWZ4 1543 aa24.19■■□□□ 1.46
NEDD4L-228ENST00000590248 GAPVD1Q14C86 1478 aa24.19■■□□□ 1.46
NEDD4L-228ENST00000590248 CHMP7Q8WUX9 453 aaPredicted RBP24.16■■□□□ 1.46
NEDD4L-228ENST00000590248 ARHGEF11O15085 1522 aa24.15■■□□□ 1.46
NEDD4L-228ENST00000590248 MAGI1Q96QZ7 1491 aaPredicted RBP24.14■■□□□ 1.46
NEDD4L-228ENST00000590248 ABCA5Q8WWZ7 1642 aa24.14■■□□□ 1.46
NEDD4L-228ENST00000590248 SYNJ2O15056 1496 aa24.07■■□□□ 1.44
NEDD4L-228ENST00000590248 CYB5RLQ6IPT4 315 aa24.03■■□□□ 1.44
NEDD4L-228ENST00000590248 CLASP1Q7Z460 1538 aa24■■□□□ 1.43
NEDD4L-228ENST00000590248 ADAMTS12P58397 1594 aa23.94■■□□□ 1.42
NEDD4L-228ENST00000590248 ARAP1Q96P48 1450 aa23.94■■□□□ 1.42
NEDD4L-228ENST00000590248 GRIN2AQ12879 1464 aa23.91■■□□□ 1.42
NEDD4L-228ENST00000590248 ERICH3Q5RHP9 1530 aa23.89■■□□□ 1.41
NEDD4L-228ENST00000590248 FHAD1B1AJZ9 1412 aa23.86■■□□□ 1.41
NEDD4L-228ENST00000590248 CEP170Q5SW79 1584 aa23.84■■□□□ 1.41
NEDD4L-228ENST00000590248 NUP160Q12769 1436 aa23.79■■□□□ 1.4
NEDD4L-228ENST00000590248 ERCC6L2Q5T890 1561 aa23.75■■□□□ 1.39
NEDD4L-228ENST00000590248 KIF27Q86VH2 1401 aa23.73■■□□□ 1.39
NEDD4L-228ENST00000590248 IGF1RP08069 1367 aa23.72■■□□□ 1.39
NEDD4L-228ENST00000590248 SHROOM2Q13796 1616 aa23.66■■□□□ 1.38
NEDD4L-228ENST00000590248 TRHP20396 242 aaPredicted RBP23.65■■□□□ 1.38
NEDD4L-228ENST00000590248 JPH4Q96JJ6 628 aa23.62■■□□□ 1.37
NEDD4L-228ENST00000590248 CUL7Q14999 1698 aa23.62■■□□□ 1.37
Retrieved 100 of 20,778 RNA–protein pairs in 76.5 ms