RNA–Protein interactions for RNA: ENST00000590162.1

TMC6-214, Transcript of transmembrane channel like 6, humanhuman

TSL 2

Gene TMC6, Length 517 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMC6-214ENST00000590162 SHANK2Q9UPX8 1470 aa23.3■■□□□ 1.32
TMC6-214ENST00000590162 EIF2AK4Q9P2K8 1649 aaKnown RBP23.29■■□□□ 1.32
TMC6-214ENST00000590162 STRCQ7RTU9 1775 aa23.28■■□□□ 1.32
TMC6-214ENST00000590162 DUOX2Q9NRD8 1548 aa23.28■■□□□ 1.32
TMC6-214ENST00000590162 ZNF142P52746 1687 aaPredicted RBP23.27■■□□□ 1.32
TMC6-214ENST00000590162 CEP170BQ9Y4F5 1589 aaPredicted RBP23.27■■□□□ 1.32
TMC6-214ENST00000590162 PTPRTO14522 1441 aa23.26■■□□□ 1.31
TMC6-214ENST00000590162 NCOA1Q15788 1441 aa23.26■■□□□ 1.31
TMC6-214ENST00000590162 CROCC2H7BZ55 1655 aa23.26■■□□□ 1.31
TMC6-214ENST00000590162 TCOF1Q13428 1488 aaKnown RBP23.26■■□□□ 1.31
TMC6-214ENST00000590162 CAMSAP1Q5T5Y3 1602 aa23.26■■□□□ 1.31
TMC6-214ENST00000590162 RNF17Q9BXT8 1623 aaKnown RBP23.26■■□□□ 1.31
TMC6-214ENST00000590162 PZPP20742 1482 aa23.25■■□□□ 1.31
TMC6-214ENST00000590162 DAPK1P53355 1430 aa23.25■■□□□ 1.31
TMC6-214ENST00000590162 ZC3H13Q5T200 1668 aaKnown RBP23.24■■□□□ 1.31
TMC6-214ENST00000590162 KIF15Q9NS87 1388 aa23.24■■□□□ 1.31
TMC6-214ENST00000590162 ABCC5O15440 1437 aa23.24■■□□□ 1.31
TMC6-214ENST00000590162 DNMT1P26358 1616 aaKnown RBP23.23■■□□□ 1.31
TMC6-214ENST00000590162 TNRQ92752 1358 aa23.23■■□□□ 1.31
TMC6-214ENST00000590162 CERKQ8TCT0 537 aa23.22■■□□□ 1.31
TMC6-214ENST00000590162 ERBINQ96RT1 1412 aa23.21■■□□□ 1.31
TMC6-214ENST00000590162 A2ML1A8K2U0 1454 aa23.21■■□□□ 1.31
TMC6-214ENST00000590162 PLA2R1Q13018 1463 aa23.21■■□□□ 1.31
TMC6-214ENST00000590162 ANKRD30AQ9BXX3 1397 aa23.19■■□□□ 1.3
TMC6-214ENST00000590162 RRP7BPQ9NSQ0 103 aa23.19■■□□□ 1.3
TMC6-214ENST00000590162 PKD2Q13563 968 aa23.18■■□□□ 1.3
TMC6-214ENST00000590162 ABCC3O15438 1527 aa23.18■■□□□ 1.3
TMC6-214ENST00000590162 FAM50AQ14320 339 aaKnown RBP23.17■■□□□ 1.3
TMC6-214ENST00000590162 FBXO31Q5XUX0 539 aaPredicted RBP23.17■■□□□ 1.3
TMC6-214ENST00000590162 NLRP1Q9C000 1473 aa23.16■■□□□ 1.3
TMC6-214ENST00000590162 NCKAP5LQ9HCH0 1330 aa23.14■■□□□ 1.3
TMC6-214ENST00000590162 CHIC2Q9UKJ5 165 aa23.14■■□□□ 1.29
TMC6-214ENST00000590162 KANK1Q14678 1352 aa23.14■■□□□ 1.29
TMC6-214ENST00000590162 MROH1Q8NDA8 1641 aa23.12■■□□□ 1.29
TMC6-214ENST00000590162 PRDM15P57071 1507 aaPredicted RBP23.12■■□□□ 1.29
TMC6-214ENST00000590162 THEMISQ8N1K5 641 aaPredicted RBP23.1■■□□□ 1.29
TMC6-214ENST00000590162 CEP152O94986 1710 aa23.08■■□□□ 1.29
TMC6-214ENST00000590162 GRWD1Q9BQ67 446 aaKnown RBP eCLIP23.08■■□□□ 1.29
TMC6-214ENST00000590162 SPATA31D1Q6ZQQ2 1576 aa23.08■■□□□ 1.29
TMC6-214ENST00000590162 UGGT1Q9NYU2 1555 aa23.08■■□□□ 1.29
TMC6-214ENST00000590162 ADGRL2O95490 1459 aa23.07■■□□□ 1.28
TMC6-214ENST00000590162 ERVK-7P63135 1459 aa23.07■■□□□ 1.28
TMC6-214ENST00000590162 DEPDC5O75140 1603 aa23.05■■□□□ 1.28
TMC6-214ENST00000590162 ANKLE2Q86XL3 938 aa23.04■■□□□ 1.28
TMC6-214ENST00000590162 ARHGAP31Q2M1Z3 1444 aa23.04■■□□□ 1.28
TMC6-214ENST00000590162 POLR1AO95602 1720 aaPredicted RBP23.03■■□□□ 1.28
TMC6-214ENST00000590162 IQSEC2Q5JU85 1478 aa23.02■■□□□ 1.28
TMC6-214ENST00000590162 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP23.01■■□□□ 1.271e-23■■□□□ 12.7
TMC6-214ENST00000590162 LTBP4Q8N2S1 1624 aa23.01■■□□□ 1.27
TMC6-214ENST00000590162 ANKRD50Q9ULJ7 1429 aa22.99■■□□□ 1.27
TMC6-214ENST00000590162 ZNF335Q9H4Z2 1342 aaPredicted RBP22.98■■□□□ 1.27
TMC6-214ENST00000590162 LMTK2Q8IWU2 1503 aa22.98■■□□□ 1.27
TMC6-214ENST00000590162 NEURL4Q96JN8 1562 aa22.95■■□□□ 1.26
TMC6-214ENST00000590162 VWDEQ8N2E2 1590 aa22.93■■□□□ 1.26
TMC6-214ENST00000590162 NPHP4O75161 1426 aaPredicted RBP22.93■■□□□ 1.26
TMC6-214ENST00000590162 STAG3Q9UJ98 1225 aa22.93■■□□□ 1.26
TMC6-214ENST00000590162 ROCK1Q13464 1354 aa22.92■■□□□ 1.26
TMC6-214ENST00000590162 PPARGC1BQ86YN6 1023 aaKnown RBP22.92■■□□□ 1.26
TMC6-214ENST00000590162 MED14O60244 1454 aa22.92■■□□□ 1.26
TMC6-214ENST00000590162 CFAP65Q6ZU64 1925 aaKnown RBP22.91■■□□□ 1.26
TMC6-214ENST00000590162 EFCAB6Q5THR3 1501 aa22.91■■□□□ 1.26
TMC6-214ENST00000590162 UBR1Q8IWV7 1749 aa22.9■■□□□ 1.26
TMC6-214ENST00000590162 ITGAEP38570 1179 aa22.89■■□□□ 1.25
TMC6-214ENST00000590162 CPS1P31327 1500 aa22.88■■□□□ 1.25
TMC6-214ENST00000590162 IQGAP1P46940 1657 aa22.88■■□□□ 1.25
TMC6-214ENST00000590162 EID1Q9Y6B2 187 aa22.88■■□□□ 1.25
TMC6-214ENST00000590162 RPRD2Q5VT52 1461 aaKnown RBP22.86■■□□□ 1.25
TMC6-214ENST00000590162 SCAF11Q99590 1463 aaKnown RBP22.85■■□□□ 1.25
TMC6-214ENST00000590162 PIK3C2BO00750 1634 aa22.84■■□□□ 1.25
TMC6-214ENST00000590162 UNC13BO14795 1591 aa22.84■■□□□ 1.25
TMC6-214ENST00000590162 SLIT1O75093 1534 aa22.83■■□□□ 1.25
TMC6-214ENST00000590162 UBAP1LF5GYI3 381 aa22.83■■□□□ 1.25
TMC6-214ENST00000590162 TXNDC2Q86VQ3 553 aa22.83■■□□□ 1.25
TMC6-214ENST00000590162 TET3O43151 1660 aa22.83■■□□□ 1.24
TMC6-214ENST00000590162 KDM5AP29375 1690 aaKnown RBP22.83■■□□□ 1.24
TMC6-214ENST00000590162 SLC52A1Q9NWF4 448 aa22.82■■□□□ 1.24
TMC6-214ENST00000590162 NOS1P29475 1434 aa22.82■■□□□ 1.24
TMC6-214ENST00000590162 ARHGAP23Q9P227 1491 aa22.81■■□□□ 1.24
TMC6-214ENST00000590162 IDI1Q13907 227 aa22.8■■□□□ 1.24
TMC6-214ENST00000590162 SYNMO15061 1565 aa22.8■■□□□ 1.24
TMC6-214ENST00000590162 TMEM2Q9UHN6 1383 aa22.79■■□□□ 1.24
TMC6-214ENST00000590162 GCC2Q8IWJ2 1684 aa22.79■■□□□ 1.24
TMC6-214ENST00000590162 ADGRB3O60242 1522 aa22.77■■□□□ 1.24
TMC6-214ENST00000590162 RRBP1Q9P2E9 1410 aaKnown RBP22.76■■□□□ 1.23
TMC6-214ENST00000590162 NUP155O75694 1391 aa22.76■■□□□ 1.23
TMC6-214ENST00000590162 TOM1O60784 492 aa22.75■■□□□ 1.23
TMC6-214ENST00000590162 LTKP29376 864 aa22.75■■□□□ 1.23
TMC6-214ENST00000590162 IQGAP3Q86VI3 1631 aa22.75■■□□□ 1.23
TMC6-214ENST00000590162 HDGFP51858 240 aaKnown RBP22.72■■□□□ 1.23
TMC6-214ENST00000590162 SCAF1Q9H7N4 1312 aaKnown RBP22.71■■□□□ 1.23
TMC6-214ENST00000590162 BCANQ96GW7 911 aa22.69■■□□□ 1.22
TMC6-214ENST00000590162 E9PCH4 1651 aa22.68■■□□□ 1.22
TMC6-214ENST00000590162 PPP1R15AO75807 674 aaPredicted RBP22.68■■□□□ 1.22
TMC6-214ENST00000590162 CHGAP10645 457 aaKnown RBP22.67■■□□□ 1.22
TMC6-214ENST00000590162 PIP4K2BP78356 416 aa22.65■■□□□ 1.22
TMC6-214ENST00000590162 LRRC7Q96NW7 1537 aa22.65■■□□□ 1.22
TMC6-214ENST00000590162 ABCF1Q8NE71 845 aaKnown RBP eCLIP22.63■■□□□ 1.21
TMC6-214ENST00000590162 RIMS2Q9UQ26 1411 aa22.62■■□□□ 1.21
TMC6-214ENST00000590162 TMEM131LA2VDJ0 1609 aa22.61■■□□□ 1.21
TMC6-214ENST00000590162 STRCP1A6NGW2 1772 aa22.61■■□□□ 1.21
Retrieved 100 of 20,778 RNA–protein pairs in 60.4 ms