RNA–Protein interactions for RNA: ENST00000589838.5

PRKCSH-209, Transcript of protein kinase C substrate 80K-H, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene PRKCSH, Length 1,898 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKCSH-209ENST00000589838 ROCK2O75116 1388 aaKnown RBP26.41■■□□□ 1.82
PRKCSH-209ENST00000589838 NEFLP07196 543 aa26.4■■□□□ 1.82
PRKCSH-209ENST00000589838 GRWD1Q9BQ67 446 aaKnown RBP eCLIP26.39■■□□□ 1.827e-8■■□□□ 11.8
PRKCSH-209ENST00000589838 KDM2AQ9Y2K7 1162 aa26.39■■□□□ 1.82
PRKCSH-209ENST00000589838 RTEL1-TNFRSF6BF6WH68 1400 aa26.39■■□□□ 1.81
PRKCSH-209ENST00000589838 HNRNPUQ00839 825 aaKnown RBP eCLIP26.38■■□□□ 1.81
PRKCSH-209ENST00000589838 WDR7Q9Y4E6 1490 aa26.37■■□□□ 1.81
PRKCSH-209ENST00000589838 ATP10AO60312 1499 aa26.36■■□□□ 1.81
PRKCSH-209ENST00000589838 TRAPPC8Q9Y2L5 1435 aa26.35■■□□□ 1.81
PRKCSH-209ENST00000589838 PLA2R1Q13018 1463 aa26.34■■□□□ 1.81
PRKCSH-209ENST00000589838 SPAG9O60271 1321 aaKnown RBP26.33■■□□□ 1.81
PRKCSH-209ENST00000589838 FKBP8Q14318 412 aa26.32■■□□□ 1.8
PRKCSH-209ENST00000589838 MRS2Q9HD23 443 aa26.32■■□□□ 1.8
PRKCSH-209ENST00000589838 PRAG1Q86YV5 1406 aa26.31■■□□□ 1.8
PRKCSH-209ENST00000589838 TRPM1Q7Z4N2 1603 aa26.31■■□□□ 1.8
PRKCSH-209ENST00000589838 ABCA9Q8IUA7 1624 aa26.3■■□□□ 1.8
PRKCSH-209ENST00000589838 DHX29Q7Z478 1369 aaKnown RBP26.29■■□□□ 1.8
PRKCSH-209ENST00000589838 POLR3GLQ9BT43 218 aa26.27■■□□□ 1.8
PRKCSH-209ENST00000589838 LAMC1P11047 1609 aa26.27■■□□□ 1.8
PRKCSH-209ENST00000589838 EIF2AK4Q9P2K8 1649 aaKnown RBP26.27■■□□□ 1.8
PRKCSH-209ENST00000589838 ZFYVE16Q7Z3T8 1539 aa26.27■■□□□ 1.8
PRKCSH-209ENST00000589838 ST20-MTHFSA0A0A6YYL1 179 aa26.25■■□□□ 1.79
PRKCSH-209ENST00000589838 CCDC184Q52MB2 194 aa26.25■■□□□ 1.79
PRKCSH-209ENST00000589838 A2MP01023 1474 aa26.25■■□□□ 1.79
PRKCSH-209ENST00000589838 FANCAO15360 1455 aa26.24■■□□□ 1.79
PRKCSH-209ENST00000589838 RGL3Q3MIN7 710 aa26.23■■□□□ 1.79
PRKCSH-209ENST00000589838 GPRASP1Q5JY77 1395 aa26.23■■□□□ 1.79
PRKCSH-209ENST00000589838 FAM9BQ8IZU0 186 aa26.22■■□□□ 1.79
PRKCSH-209ENST00000589838 AFAP1Q8N556 730 aa26.21■■□□□ 1.79
PRKCSH-209ENST00000589838 INO80Q9ULG1 1556 aaPredicted RBP26.2■■□□□ 1.78
PRKCSH-209ENST00000589838 DEPDC5O75140 1603 aa26.2■■□□□ 1.78
PRKCSH-209ENST00000589838 ATP7AQ04656 1500 aa26.19■■□□□ 1.78
PRKCSH-209ENST00000589838 KTN1Q86UP2 1357 aaKnown RBP26.18■■□□□ 1.78
PRKCSH-209ENST00000589838 ASXL2Q76L83 1435 aa26.17■■□□□ 1.78
PRKCSH-209ENST00000589838 E9PCH4 1651 aa26.17■■□□□ 1.78
PRKCSH-209ENST00000589838 ZBED9Q6R2W3 1325 aa26.17■■□□□ 1.78
PRKCSH-209ENST00000589838 KANK1Q14678 1352 aa26.16■■□□□ 1.78
PRKCSH-209ENST00000589838 ADGRL1O94910 1474 aa26.15■■□□□ 1.78
PRKCSH-209ENST00000589838 PRDM15P57071 1507 aaPredicted RBP26.15■■□□□ 1.78
PRKCSH-209ENST00000589838 STAC3Q96MF2 364 aa26.15■■□□□ 1.78
PRKCSH-209ENST00000589838 TET3O43151 1660 aa26.14■■□□□ 1.78
PRKCSH-209ENST00000589838 OSCARQ8IYS5 282 aa26.14■■□□□ 1.78
PRKCSH-209ENST00000589838 TRPM2O94759 1503 aa26.14■■□□□ 1.77
PRKCSH-209ENST00000589838 NPM1P06748 294 aaKnown RBP eCLIP26.13■■□□□ 1.77
PRKCSH-209ENST00000589838 SCAPERQ9BY12 1400 aa26.13■■□□□ 1.77
PRKCSH-209ENST00000589838 SPHKAPQ2M3C7 1700 aa26.12■■□□□ 1.77
PRKCSH-209ENST00000589838 BCANQ96GW7 911 aa26.12■■□□□ 1.77
PRKCSH-209ENST00000589838 PTPRTO14522 1441 aa26.11■■□□□ 1.77
PRKCSH-209ENST00000589838 NBPF1Q3BBV0 1214 aa26.11■■□□□ 1.77
PRKCSH-209ENST00000589838 CEP152O94986 1710 aa26.1■■□□□ 1.77
PRKCSH-209ENST00000589838 RALBP1Q15311 655 aa26.1■■□□□ 1.77
PRKCSH-209ENST00000589838 VWDEQ8N2E2 1590 aa26.09■■□□□ 1.77
PRKCSH-209ENST00000589838 MYT1LQ9UL68 1186 aa26.07■■□□□ 1.76
PRKCSH-209ENST00000589838 RNF17Q9BXT8 1623 aaKnown RBP26.07■■□□□ 1.76
PRKCSH-209ENST00000589838 ERICH6BQ5W0A0 696 aa26.06■■□□□ 1.76
PRKCSH-209ENST00000589838 CFAP74Q9C0B2 1584 aa26.05■■□□□ 1.76
PRKCSH-209ENST00000589838 COL17A1Q9UMD9 1497 aaPredicted RBP26.05■■□□□ 1.76
PRKCSH-209ENST00000589838 TMC1Q8TDI8 760 aa26.03■■□□□ 1.76
PRKCSH-209ENST00000589838 KIF3BO15066 747 aa26.02■■□□□ 1.76
PRKCSH-209ENST00000589838 MYBBP1AQ9BQG0 1328 aaKnown RBP26.02■■□□□ 1.76
PRKCSH-209ENST00000589838 NEURL4Q96JN8 1562 aa26.02■■□□□ 1.76
PRKCSH-209ENST00000589838 BRD4O60885 1362 aaPredicted RBP26.02■■□□□ 1.76
PRKCSH-209ENST00000589838 CLTCL1P53675 1640 aa26.01■■□□□ 1.75
PRKCSH-209ENST00000589838 ZNF518AQ6AHZ1 1483 aa26.01■■□□□ 1.75
PRKCSH-209ENST00000589838 MADDQ8WXG6 1647 aa26.01■■□□□ 1.75
PRKCSH-209ENST00000589838 WASHC2CQ9Y4E1 1318 aa26■■□□□ 1.75
PRKCSH-209ENST00000589838 TMF1P82094 1093 aa26■■□□□ 1.75
PRKCSH-209ENST00000589838 CNGB1Q14028 1251 aaPredicted RBP25.99■■□□□ 1.75
PRKCSH-209ENST00000589838 TESK2Q96S53 571 aa25.99■■□□□ 1.75
PRKCSH-209ENST00000589838 KIDINS220Q9ULH0 1771 aa25.99■■□□□ 1.75
PRKCSH-209ENST00000589838 PNISRQ8TF01 805 aaKnown RBP25.98■■□□□ 1.75
PRKCSH-209ENST00000589838 MROH1Q8NDA8 1641 aa25.96■■□□□ 1.75
PRKCSH-209ENST00000589838 TSHZ2Q9NRE2 1034 aa25.96■■□□□ 1.75
PRKCSH-209ENST00000589838 IQGAP1P46940 1657 aa25.94■■□□□ 1.74
PRKCSH-209ENST00000589838 CD109Q6YHK3 1445 aa25.94■■□□□ 1.74
PRKCSH-209ENST00000589838 KIAA1210Q9ULL0 1709 aa25.93■■□□□ 1.74
PRKCSH-209ENST00000589838 DISP3Q9P2K9 1392 aa25.93■■□□□ 1.74
PRKCSH-209ENST00000589838 SMG6Q86US8 1419 aaKnown RBP25.92■■□□□ 1.74
PRKCSH-209ENST00000589838 PARD3Q8TEW0 1356 aa25.92■■□□□ 1.74
PRKCSH-209ENST00000589838 LMTK2Q8IWU2 1503 aa25.91■■□□□ 1.74
PRKCSH-209ENST00000589838 KIF1BO60333 1816 aa25.91■■□□□ 1.74
PRKCSH-209ENST00000589838 LRPPRCP42704 1394 aaKnown RBP25.9■■□□□ 1.74
PRKCSH-209ENST00000589838 EFCAB6Q5THR3 1501 aa25.9■■□□□ 1.74
PRKCSH-209ENST00000589838 PER1O15534 1290 aaPredicted RBP25.9■■□□□ 1.74
PRKCSH-209ENST00000589838 NLRP13Q86W25 1043 aa25.9■■□□□ 1.74
PRKCSH-209ENST00000589838 SCAF11Q99590 1463 aaKnown RBP25.89■■□□□ 1.73
PRKCSH-209ENST00000589838 CDCA8Q53HL2 280 aa25.88■■□□□ 1.73
PRKCSH-209ENST00000589838 POGZQ7Z3K3 1410 aa25.88■■□□□ 1.73
PRKCSH-209ENST00000589838 MLH3Q9UHC1 1453 aa25.87■■□□□ 1.73
PRKCSH-209ENST00000589838 EIF3AQ14152 1382 aaKnown RBP25.85■■□□□ 1.73
PRKCSH-209ENST00000589838 SLC24A1O60721 1099 aa25.84■■□□□ 1.73
PRKCSH-209ENST00000589838 NUDCQ9Y266 331 aa25.84■■□□□ 1.73
PRKCSH-209ENST00000589838 MYOM2P54296 1465 aa25.84■■□□□ 1.73
PRKCSH-209ENST00000589838 HECW2Q9P2P5 1572 aa25.83■■□□□ 1.73
PRKCSH-209ENST00000589838 PANK3Q9H999 370 aa25.83■■□□□ 1.73
PRKCSH-209ENST00000589838 PPP4R2Q9NY27 417 aa25.83■■□□□ 1.73
PRKCSH-209ENST00000589838 PPRC1Q5VV67 1664 aaKnown RBP25.83■■□□□ 1.73
PRKCSH-209ENST00000589838 NEO1Q92859 1461 aa25.82■■□□□ 1.72
PRKCSH-209ENST00000589838 IRX6P78412 446 aaPredicted RBP25.81■■□□□ 1.72
PRKCSH-209ENST00000589838 MAP3K4Q9Y6R4 1608 aa25.81■■□□□ 1.72
Retrieved 100 of 20,778 RNA–protein pairs in 63.5 ms