RNA–Protein interactions for RNA: ENST00000589828.1

VAT1-207, Transcript of vesicle amine transport 1, humanhuman

TSL 2

Gene VAT1, Length 521 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAT1-207ENST00000589828 DNMT1P26358 1616 aaKnown RBP13.13□□□□□ -0.31
VAT1-207ENST00000589828 CPS1P31327 1500 aa13.13□□□□□ -0.31
VAT1-207ENST00000589828 NEURL4Q96JN8 1562 aa13.12□□□□□ -0.31
VAT1-207ENST00000589828 ZNF644Q9H582 1327 aaPredicted RBP13.12□□□□□ -0.31
VAT1-207ENST00000589828 INO80Q9ULG1 1556 aaPredicted RBP13.11□□□□□ -0.31
VAT1-207ENST00000589828 TNRQ92752 1358 aa13.11□□□□□ -0.31
VAT1-207ENST00000589828 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP13.11□□□□□ -0.31
VAT1-207ENST00000589828 RGS17Q9UGC6 210 aaPredicted RBP13.1□□□□□ -0.31
VAT1-207ENST00000589828 ANKLE2Q86XL3 938 aa13.09□□□□□ -0.31
VAT1-207ENST00000589828 VWDEQ8N2E2 1590 aa13.09□□□□□ -0.31
VAT1-207ENST00000589828 PLEKHH2Q8IVE3 1493 aa13.09□□□□□ -0.31
VAT1-207ENST00000589828 CCNB3Q8WWL7 1395 aa13.08□□□□□ -0.31
VAT1-207ENST00000589828 DHX29Q7Z478 1369 aaKnown RBP13.07□□□□□ -0.32
VAT1-207ENST00000589828 MBD5Q9P267 1494 aa13.07□□□□□ -0.32
VAT1-207ENST00000589828 NPHP4O75161 1426 aaPredicted RBP13.06□□□□□ -0.32
VAT1-207ENST00000589828 FYCO1Q9BQS8 1478 aa13.06□□□□□ -0.32
VAT1-207ENST00000589828 KIF3BO15066 747 aa13.06□□□□□ -0.32
VAT1-207ENST00000589828 MIA2Q96PC5 1412 aa13.05□□□□□ -0.32
VAT1-207ENST00000589828 PZPP20742 1482 aa13.05□□□□□ -0.32
VAT1-207ENST00000589828 THEMISQ8N1K5 641 aaPredicted RBP13.05□□□□□ -0.32
VAT1-207ENST00000589828 MED14O60244 1454 aa13.04□□□□□ -0.32
VAT1-207ENST00000589828 RTEL1-TNFRSF6BF6WH68 1400 aa13.04□□□□□ -0.32
VAT1-207ENST00000589828 LRRC7Q96NW7 1537 aa13.03□□□□□ -0.32
VAT1-207ENST00000589828 WASHC2CQ9Y4E1 1318 aa13.02□□□□□ -0.33
VAT1-207ENST00000589828 NLRP1Q9C000 1473 aa13□□□□□ -0.33
VAT1-207ENST00000589828 MTUS2Q5JR59 1369 aa13□□□□□ -0.33
VAT1-207ENST00000589828 POLR1AO95602 1720 aaPredicted RBP12.99□□□□□ -0.33
VAT1-207ENST00000589828 UGGT1Q9NYU2 1555 aa12.99□□□□□ -0.33
VAT1-207ENST00000589828 KDM5DQ9BY66 1539 aa12.99□□□□□ -0.33
VAT1-207ENST00000589828 FAM135AQ9P2D6 1515 aa12.99□□□□□ -0.33
VAT1-207ENST00000589828 POTEAQ6S8J7 498 aa12.99□□□□□ -0.33
VAT1-207ENST00000589828 ADGBQ8N7X0 1667 aa12.99□□□□□ -0.33
VAT1-207ENST00000589828 DEPDC5O75140 1603 aa12.97□□□□□ -0.33
VAT1-207ENST00000589828 TIAM1Q13009 1591 aa12.97□□□□□ -0.33
VAT1-207ENST00000589828 STRCP1A6NGW2 1772 aa12.97□□□□□ -0.33
VAT1-207ENST00000589828 LTKP29376 864 aa12.95□□□□□ -0.34
VAT1-207ENST00000589828 MAPK8IP2Q13387 824 aaPredicted RBP12.94□□□□□ -0.34
VAT1-207ENST00000589828 CCDC141Q6ZP82 1450 aa12.93□□□□□ -0.34
VAT1-207ENST00000589828 KCNA4P22459 653 aa12.93□□□□□ -0.34
VAT1-207ENST00000589828 CEP162Q5TB80 1403 aa12.93□□□□□ -0.34
VAT1-207ENST00000589828 IQGAP1P46940 1657 aa12.93□□□□□ -0.34
VAT1-207ENST00000589828 RNF17Q9BXT8 1623 aaKnown RBP12.92□□□□□ -0.34
VAT1-207ENST00000589828 NCOA2Q15596 1464 aa12.91□□□□□ -0.34
VAT1-207ENST00000589828 ERVK-7P63135 1459 aa12.91□□□□□ -0.34
VAT1-207ENST00000589828 FAM135BQ49AJ0 1406 aa12.9□□□□□ -0.34
VAT1-207ENST00000589828 ABCC3O15438 1527 aa12.9□□□□□ -0.34
VAT1-207ENST00000589828 RSPH4AQ5TD94 716 aa12.9□□□□□ -0.34
VAT1-207ENST00000589828 TXNDC2Q86VQ3 553 aa12.9□□□□□ -0.34
VAT1-207ENST00000589828 CAMSAP2Q08AD1 1489 aa12.9□□□□□ -0.34
VAT1-207ENST00000589828 SYNMO15061 1565 aa12.9□□□□□ -0.35
VAT1-207ENST00000589828 SCAF11Q99590 1463 aaKnown RBP12.89□□□□□ -0.35
VAT1-207ENST00000589828 EHBP1L1Q8N3D4 1523 aa12.88□□□□□ -0.35
VAT1-207ENST00000589828 ZC3H13Q5T200 1668 aaKnown RBP12.87□□□□□ -0.35
VAT1-207ENST00000589828 ARHGAP23Q9P227 1491 aa12.87□□□□□ -0.35
VAT1-207ENST00000589828 TSPY4P0CV99 314 aa12.87□□□□□ -0.35
VAT1-207ENST00000589828 TSPY10P0CW01 314 aa12.87□□□□□ -0.35
VAT1-207ENST00000589828 TMEM94Q12767 1356 aa12.86□□□□□ -0.35
VAT1-207ENST00000589828 RBM33Q96EV2 1170 aaKnown RBP12.86□□□□□ -0.35
VAT1-207ENST00000589828 SLIT1O75093 1534 aa12.84□□□□□ -0.35
VAT1-207ENST00000589828 NCBP3Q53F19 620 aaKnown RBP12.84□□□□□ -0.35
VAT1-207ENST00000589828 MROH1Q8NDA8 1641 aa12.82□□□□□ -0.36
VAT1-207ENST00000589828 KCNA6P17658 529 aa12.82□□□□□ -0.36
VAT1-207ENST00000589828 EID1Q9Y6B2 187 aa12.82□□□□□ -0.36
VAT1-207ENST00000589828 TMEM2Q9UHN6 1383 aa12.81□□□□□ -0.36
VAT1-207ENST00000589828 ARHGEF5Q12774 1597 aa12.81□□□□□ -0.36
VAT1-207ENST00000589828 XIRP1Q702N8 1843 aaKnown RBP12.81□□□□□ -0.36
VAT1-207ENST00000589828 PROSER2Q86WR7 435 aaPredicted RBP12.81□□□□□ -0.36
VAT1-207ENST00000589828 UBR1Q8IWV7 1749 aa12.81□□□□□ -0.36
VAT1-207ENST00000589828 MAP3K1Q13233 1512 aa12.8□□□□□ -0.36
VAT1-207ENST00000589828 SLC26A8Q96RN1 970 aa12.8□□□□□ -0.36
VAT1-207ENST00000589828 UPF1Q92900 1129 aaKnown RBP eCLIP12.79□□□□□ -0.36
VAT1-207ENST00000589828 ARHGAP31Q2M1Z3 1444 aa12.79□□□□□ -0.36
VAT1-207ENST00000589828 CNKSR2Q8WXI2 1034 aa12.78□□□□□ -0.36
VAT1-207ENST00000589828 SETD1AO15047 1707 aaKnown RBP12.77□□□□□ -0.36
VAT1-207ENST00000589828 IDI1Q13907 227 aa12.77□□□□□ -0.37
VAT1-207ENST00000589828 MAST1Q9Y2H9 1570 aa12.77□□□□□ -0.37
VAT1-207ENST00000589828 ROBO1Q9Y6N7 1651 aa12.77□□□□□ -0.37
VAT1-207ENST00000589828 SLAIN2Q9P270 581 aa12.76□□□□□ -0.37
VAT1-207ENST00000589828 JCADQ9P266 1359 aa12.76□□□□□ -0.37
VAT1-207ENST00000589828 GRWD1Q9BQ67 446 aaKnown RBP eCLIP12.75□□□□□ -0.37
VAT1-207ENST00000589828 STAG3Q9UJ98 1225 aa12.75□□□□□ -0.37
VAT1-207ENST00000589828 TET3O43151 1660 aa12.74□□□□□ -0.37
VAT1-207ENST00000589828 PRDM15P57071 1507 aaPredicted RBP12.74□□□□□ -0.37
VAT1-207ENST00000589828 CEP152O94986 1710 aa12.74□□□□□ -0.37
VAT1-207ENST00000589828 LRP6O75581 1613 aa12.73□□□□□ -0.37
VAT1-207ENST00000589828 EIF2AK4Q9P2K8 1649 aaKnown RBP12.73□□□□□ -0.37
VAT1-207ENST00000589828 LRRC9Q6ZRR7 1453 aa12.73□□□□□ -0.37
VAT1-207ENST00000589828 KANK4Q5T7N3 995 aaPredicted RBP12.73□□□□□ -0.37
VAT1-207ENST00000589828 TRIM52Q96A61 297 aa12.73□□□□□ -0.37
VAT1-207ENST00000589828 RRP7BPQ9NSQ0 103 aa12.73□□□□□ -0.37
VAT1-207ENST00000589828 MSH6P52701 1360 aa12.72□□□□□ -0.37
VAT1-207ENST00000589828 KIF15Q9NS87 1388 aa12.72□□□□□ -0.37
VAT1-207ENST00000589828 PIK3C2BO00750 1634 aa12.72□□□□□ -0.37
VAT1-207ENST00000589828 DUOX2Q9NRD8 1548 aa12.72□□□□□ -0.37
VAT1-207ENST00000589828 EFCAB6Q5THR3 1501 aa12.71□□□□□ -0.38
VAT1-207ENST00000589828 NKTRP30414 1462 aaKnown RBP12.7□□□□□ -0.38
VAT1-207ENST00000589828 CFAP65Q6ZU64 1925 aaKnown RBP12.7□□□□□ -0.38
VAT1-207ENST00000589828 ZNF772Q68DY9 489 aaPredicted RBP12.69□□□□□ -0.38
VAT1-207ENST00000589828 MYOM3Q5VTT5 1437 aa12.69□□□□□ -0.38
VAT1-207ENST00000589828 NWD1Q149M9 1564 aa12.69□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 41.8 ms