RNA–Protein interactions for RNA: ENST00000588780.5

CAPNS1-205, Transcript of calpain small subunit 1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene CAPNS1, Length 1,035 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPNS1-205ENST00000588780 FBXO31Q5XUX0 539 aaPredicted RBP35.3■■■■□ 3.24
CAPNS1-205ENST00000588780 CPS1P31327 1500 aa35.3■■■■□ 3.24
CAPNS1-205ENST00000588780 SHANK2Q9UPX8 1470 aa35.28■■■■□ 3.24
CAPNS1-205ENST00000588780 KIF3BO15066 747 aa35.27■■■■□ 3.24
CAPNS1-205ENST00000588780 ANKLE2Q86XL3 938 aa35.26■■■■□ 3.24
CAPNS1-205ENST00000588780 POLR1AO95602 1720 aaPredicted RBP35.25■■■■□ 3.23
CAPNS1-205ENST00000588780 DHX29Q7Z478 1369 aaKnown RBP35.24■■■■□ 3.23
CAPNS1-205ENST00000588780 SENP3Q9H4L4 574 aaPredicted RBP35.22■■■■□ 3.23
CAPNS1-205ENST00000588780 WASHC2CQ9Y4E1 1318 aa35.21■■■■□ 3.23
CAPNS1-205ENST00000588780 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP35.21■■■■□ 3.23
CAPNS1-205ENST00000588780 THEMISQ8N1K5 641 aaPredicted RBP35.2■■■■□ 3.23
CAPNS1-205ENST00000588780 RTEL1-TNFRSF6BF6WH68 1400 aa35.19■■■■□ 3.22
CAPNS1-205ENST00000588780 NEURL4Q96JN8 1562 aa35.19■■■■□ 3.22
CAPNS1-205ENST00000588780 MBD5Q9P267 1494 aa35.16■■■■□ 3.22
CAPNS1-205ENST00000588780 TIAM1Q13009 1591 aa35.15■■■■□ 3.22
CAPNS1-205ENST00000588780 PZPP20742 1482 aa35.15■■■■□ 3.22
CAPNS1-205ENST00000588780 KDM5DQ9BY66 1539 aa35.14■■■■□ 3.22
CAPNS1-205ENST00000588780 NPHP4O75161 1426 aaPredicted RBP35.11■■■■□ 3.21
CAPNS1-205ENST00000588780 FAM135AQ9P2D6 1515 aa35.09■■■■□ 3.21
CAPNS1-205ENST00000588780 MIA2Q96PC5 1412 aa35.08■■■■□ 3.21
CAPNS1-205ENST00000588780 VWDEQ8N2E2 1590 aa35.08■■■■□ 3.21
CAPNS1-205ENST00000588780 UGGT1Q9NYU2 1555 aa35.08■■■■□ 3.21
CAPNS1-205ENST00000588780 EHBP1L1Q8N3D4 1523 aa35.06■■■■□ 3.2
CAPNS1-205ENST00000588780 NLRP1Q9C000 1473 aa35.06■■■■□ 3.2
CAPNS1-205ENST00000588780 CCDC141Q6ZP82 1450 aa35.04■■■■□ 3.2
CAPNS1-205ENST00000588780 CEP162Q5TB80 1403 aa35■■■■□ 3.19
CAPNS1-205ENST00000588780 RSPH4AQ5TD94 716 aa35■■■■□ 3.19
CAPNS1-205ENST00000588780 MED14O60244 1454 aa34.99■■■■□ 3.19
CAPNS1-205ENST00000588780 DEPDC5O75140 1603 aa34.98■■■■□ 3.19
CAPNS1-205ENST00000588780 TSPY4P0CV99 314 aa34.97■■■■□ 3.19
CAPNS1-205ENST00000588780 TSPY10P0CW01 314 aa34.97■■■■□ 3.19
CAPNS1-205ENST00000588780 CAMSAP2Q08AD1 1489 aa34.97■■■■□ 3.19
CAPNS1-205ENST00000588780 IQGAP1P46940 1657 aa34.96■■■■□ 3.19
CAPNS1-205ENST00000588780 ALKQ9UM73 1620 aa34.94■■■■□ 3.18
CAPNS1-205ENST00000588780 LRRC7Q96NW7 1537 aa34.91■■■■□ 3.18
CAPNS1-205ENST00000588780 NCOA2Q15596 1464 aa34.87■■■■□ 3.17
CAPNS1-205ENST00000588780 RNF17Q9BXT8 1623 aaKnown RBP34.86■■■■□ 3.17
CAPNS1-205ENST00000588780 STRCP1A6NGW2 1772 aa34.84■■■■□ 3.17
CAPNS1-205ENST00000588780 SYNMO15061 1565 aa34.83■■■■□ 3.17
CAPNS1-205ENST00000588780 ABCC3O15438 1527 aa34.79■■■■□ 3.16
CAPNS1-205ENST00000588780 ARHGEF5Q12774 1597 aa34.78■■■■□ 3.16
CAPNS1-205ENST00000588780 ERVK-7P63135 1459 aa34.78■■■■□ 3.16
CAPNS1-205ENST00000588780 ZC3H13Q5T200 1668 aaKnown RBP34.74■■■■□ 3.15
CAPNS1-205ENST00000588780 TXNDC2Q86VQ3 553 aa34.74■■■■□ 3.15
CAPNS1-205ENST00000588780 SCAF11Q99590 1463 aaKnown RBP34.73■■■■□ 3.15
CAPNS1-205ENST00000588780 CFAP65Q6ZU64 1925 aaKnown RBP34.72■■■■□ 3.15
CAPNS1-205ENST00000588780 RGS17Q9UGC6 210 aaPredicted RBP34.71■■■■□ 3.15
CAPNS1-205ENST00000588780 EID1Q9Y6B2 187 aa34.7■■■■□ 3.15
CAPNS1-205ENST00000588780 LTKP29376 864 aa34.68■■■■□ 3.14
CAPNS1-205ENST00000588780 UBR1Q8IWV7 1749 aa34.67■■■■□ 3.14
CAPNS1-205ENST00000588780 STAG3Q9UJ98 1225 aa34.64■■■■□ 3.14
CAPNS1-205ENST00000588780 CEP152O94986 1710 aa34.64■■■■□ 3.14
CAPNS1-205ENST00000588780 EIF2AK4Q9P2K8 1649 aaKnown RBP34.63■■■■□ 3.13
CAPNS1-205ENST00000588780 MAST1Q9Y2H9 1570 aa34.6■■■■□ 3.13
CAPNS1-205ENST00000588780 MROH1Q8NDA8 1641 aa34.56■■■■□ 3.12
CAPNS1-205ENST00000588780 ARHGAP23Q9P227 1491 aa34.56■■■■□ 3.12
CAPNS1-205ENST00000588780 SLIT1O75093 1534 aa34.55■■■■□ 3.12
CAPNS1-205ENST00000588780 GRWD1Q9BQ67 446 aaKnown RBP eCLIP34.55■■■■□ 3.12
CAPNS1-205ENST00000588780 FAM135BQ49AJ0 1406 aa34.55■■■■□ 3.12
CAPNS1-205ENST00000588780 POTEAQ6S8J7 498 aa34.54■■■■□ 3.12
CAPNS1-205ENST00000588780 XIRP1Q702N8 1843 aaKnown RBP34.53■■■■□ 3.12
CAPNS1-205ENST00000588780 TMEM94Q12767 1356 aa34.51■■■■□ 3.12
CAPNS1-205ENST00000588780 DUOX2Q9NRD8 1548 aa34.51■■■■□ 3.12
CAPNS1-205ENST00000588780 PROSER2Q86WR7 435 aaPredicted RBP34.5■■■■□ 3.11
CAPNS1-205ENST00000588780 LRRC9Q6ZRR7 1453 aa34.5■■■■□ 3.11
CAPNS1-205ENST00000588780 TMEM2Q9UHN6 1383 aa34.48■■■■□ 3.11
CAPNS1-205ENST00000588780 RBM33Q96EV2 1170 aaKnown RBP34.47■■■■□ 3.11
CAPNS1-205ENST00000588780 ARHGAP31Q2M1Z3 1444 aa34.46■■■■□ 3.11
CAPNS1-205ENST00000588780 RRP7BPQ9NSQ0 103 aa34.45■■■■□ 3.11
CAPNS1-205ENST00000588780 KIF15Q9NS87 1388 aa34.45■■■■□ 3.11
CAPNS1-205ENST00000588780 MYOM3Q5VTT5 1437 aa34.45■■■■□ 3.11
CAPNS1-205ENST00000588780 KCNA6P17658 529 aa34.44■■■■□ 3.1
CAPNS1-205ENST00000588780 BCANQ96GW7 911 aa34.44■■■■□ 3.1
CAPNS1-205ENST00000588780 SLC26A8Q96RN1 970 aa34.44■■■■□ 3.1
CAPNS1-205ENST00000588780 PIK3C2BO00750 1634 aa34.44■■■■□ 3.1
CAPNS1-205ENST00000588780 KANK1Q14678 1352 aa34.42■■■■□ 3.1
CAPNS1-205ENST00000588780 ROBO1Q9Y6N7 1651 aa34.41■■■■□ 3.1
CAPNS1-205ENST00000588780 PRDM15P57071 1507 aaPredicted RBP34.4■■■■□ 3.1
CAPNS1-205ENST00000588780 KANK4Q5T7N3 995 aaPredicted RBP34.39■■■■□ 3.1
CAPNS1-205ENST00000588780 EFCAB6Q5THR3 1501 aa34.37■■■■□ 3.09
CAPNS1-205ENST00000588780 ERBINQ96RT1 1412 aa34.37■■■■□ 3.09
CAPNS1-205ENST00000588780 IDI1Q13907 227 aa34.36■■■■□ 3.09
CAPNS1-205ENST00000588780 VPS8Q8N3P4 1428 aa34.34■■■■□ 3.09
CAPNS1-205ENST00000588780 MSH6P52701 1360 aa34.33■■■■□ 3.09
CAPNS1-205ENST00000588780 MAP3K1Q13233 1512 aa34.3■■■■□ 3.08
CAPNS1-205ENST00000588780 SLAIN2Q9P270 581 aa34.28■■■■□ 3.08
CAPNS1-205ENST00000588780 ABCC5O15440 1437 aa34.26■■■■□ 3.07
CAPNS1-205ENST00000588780 SETD1AO15047 1707 aaKnown RBP34.26■■■■□ 3.07
CAPNS1-205ENST00000588780 JCADQ9P266 1359 aa34.25■■■■□ 3.07
CAPNS1-205ENST00000588780 NKTRP30414 1462 aaKnown RBP34.24■■■■□ 3.07
CAPNS1-205ENST00000588780 PHLPP1O60346 1717 aa34.24■■■■□ 3.07
CAPNS1-205ENST00000588780 TET3O43151 1660 aa34.23■■■■□ 3.07
CAPNS1-205ENST00000588780 KDM5AP29375 1690 aaKnown RBP34.23■■■■□ 3.07
CAPNS1-205ENST00000588780 MEX3CQ5U5Q3 659 aaKnown RBP34.22■■■■□ 3.07
CAPNS1-205ENST00000588780 CHIC2Q9UKJ5 165 aa34.22■■■■□ 3.07
CAPNS1-205ENST00000588780 CROCC2H7BZ55 1655 aa34.21■■■■□ 3.07
CAPNS1-205ENST00000588780 PPP1R15AO75807 674 aaPredicted RBP34.19■■■■□ 3.06
CAPNS1-205ENST00000588780 C14orf37Q86TY3 774 aa34.19■■■■□ 3.06
CAPNS1-205ENST00000588780 ADGRB3O60242 1522 aa34.17■■■■□ 3.06
CAPNS1-205ENST00000588780 DAPK1P53355 1430 aa34.17■■■■□ 3.06
Retrieved 100 of 20,778 RNA–protein pairs in 31.2 ms