RNA–Protein interactions for RNA: ENST00000588419.1

HDAC5-208, Transcript of histone deacetylase 5, humanhuman

TSL 2

Gene HDAC5, Length 742 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC5-208ENST00000588419 TSPY4P0CV99 314 aa21.7■■□□□ 1.06
HDAC5-208ENST00000588419 TSPY10P0CW01 314 aa21.7■■□□□ 1.06
HDAC5-208ENST00000588419 ZNF335Q9H4Z2 1342 aaPredicted RBP21.7■■□□□ 1.06
HDAC5-208ENST00000588419 CFAP65Q6ZU64 1925 aaKnown RBP21.7■■□□□ 1.06
HDAC5-208ENST00000588419 TCOF1Q13428 1488 aaKnown RBP21.7■■□□□ 1.06
HDAC5-208ENST00000588419 FAM135AQ9P2D6 1515 aa21.7■■□□□ 1.06
HDAC5-208ENST00000588419 CEP152O94986 1710 aa21.69■■□□□ 1.06
HDAC5-208ENST00000588419 RSPH4AQ5TD94 716 aa21.69■■□□□ 1.06
HDAC5-208ENST00000588419 TNRQ92752 1358 aa21.69■■□□□ 1.06
HDAC5-208ENST00000588419 PZPP20742 1482 aa21.69■■□□□ 1.06
HDAC5-208ENST00000588419 MAST1Q9Y2H9 1570 aa21.69■■□□□ 1.06
HDAC5-208ENST00000588419 FBXO31Q5XUX0 539 aaPredicted RBP21.68■■□□□ 1.06
HDAC5-208ENST00000588419 WASHC2CQ9Y4E1 1318 aa21.68■■□□□ 1.06
HDAC5-208ENST00000588419 RNF17Q9BXT8 1623 aaKnown RBP21.68■■□□□ 1.06
HDAC5-208ENST00000588419 ZC3H13Q5T200 1668 aaKnown RBP21.67■■□□□ 1.06
HDAC5-208ENST00000588419 IQSEC2Q5JU85 1478 aa21.67■■□□□ 1.06
HDAC5-208ENST00000588419 PKD2Q13563 968 aa21.67■■□□□ 1.06
HDAC5-208ENST00000588419 KANK4Q5T7N3 995 aaPredicted RBP21.67■■□□□ 1.06
HDAC5-208ENST00000588419 CROCC2H7BZ55 1655 aa21.66■■□□□ 1.06
HDAC5-208ENST00000588419 EIF2AK4Q9P2K8 1649 aaKnown RBP21.66■■□□□ 1.06
HDAC5-208ENST00000588419 MYOM3Q5VTT5 1437 aa21.65■■□□□ 1.06
HDAC5-208ENST00000588419 MAP3K1Q13233 1512 aa21.65■■□□□ 1.06
HDAC5-208ENST00000588419 NEURL4Q96JN8 1562 aa21.63■■□□□ 1.05
HDAC5-208ENST00000588419 DISP3Q9P2K9 1392 aa21.61■■□□□ 1.05
HDAC5-208ENST00000588419 SPATA31D1Q6ZQQ2 1576 aa21.61■■□□□ 1.05
HDAC5-208ENST00000588419 ABCC3O15438 1527 aa21.61■■□□□ 1.05
HDAC5-208ENST00000588419 PTPN23Q9H3S7 1636 aa21.6■■□□□ 1.05
HDAC5-208ENST00000588419 UGGT1Q9NYU2 1555 aa21.6■■□□□ 1.05
HDAC5-208ENST00000588419 MIA2Q96PC5 1412 aa21.59■■□□□ 1.05
HDAC5-208ENST00000588419 MROH1Q8NDA8 1641 aa21.58■■□□□ 1.05
HDAC5-208ENST00000588419 APLP2Q06481 763 aa21.57■■□□□ 1.04
HDAC5-208ENST00000588419 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP21.57■■□□□ 1.04
HDAC5-208ENST00000588419 NLRP1Q9C000 1473 aa21.57■■□□□ 1.04
HDAC5-208ENST00000588419 UBAP1LF5GYI3 381 aa21.56■■□□□ 1.04
HDAC5-208ENST00000588419 DUOX2Q9NRD8 1548 aa21.55■■□□□ 1.04
HDAC5-208ENST00000588419 IQGAP1P46940 1657 aa21.54■■□□□ 1.04
HDAC5-208ENST00000588419 ERVK-7P63135 1459 aa21.52■■□□□ 1.04
HDAC5-208ENST00000588419 DEPDC5O75140 1603 aa21.51■■□□□ 1.03
HDAC5-208ENST00000588419 UBR1Q8IWV7 1749 aa21.51■■□□□ 1.03
HDAC5-208ENST00000588419 SCAF1Q9H7N4 1312 aaKnown RBP21.51■■□□□ 1.03
HDAC5-208ENST00000588419 KIF15Q9NS87 1388 aa21.5■■□□□ 1.03
HDAC5-208ENST00000588419 ANKLE2Q86XL3 938 aa21.5■■□□□ 1.03
HDAC5-208ENST00000588419 THEMISQ8N1K5 641 aaPredicted RBP21.5■■□□□ 1.03
HDAC5-208ENST00000588419 SHANK2Q9UPX8 1470 aa21.5■■□□□ 1.03
HDAC5-208ENST00000588419 CPS1P31327 1500 aa21.5■■□□□ 1.03
HDAC5-208ENST00000588419 PRDM15P57071 1507 aaPredicted RBP21.49■■□□□ 1.03
HDAC5-208ENST00000588419 NPHP4O75161 1426 aaPredicted RBP21.48■■□□□ 1.03
HDAC5-208ENST00000588419 VWDEQ8N2E2 1590 aa21.48■■□□□ 1.03
HDAC5-208ENST00000588419 ABCC5O15440 1437 aa21.47■■□□□ 1.03
HDAC5-208ENST00000588419 DAPK1P53355 1430 aa21.47■■□□□ 1.03
HDAC5-208ENST00000588419 RRP7BPQ9NSQ0 103 aa21.47■■□□□ 1.03
HDAC5-208ENST00000588419 FGD6Q6ZV73 1430 aa21.46■■□□□ 1.03
HDAC5-208ENST00000588419 ERBINQ96RT1 1412 aa21.46■■□□□ 1.03
HDAC5-208ENST00000588419 GRWD1Q9BQ67 446 aaKnown RBP eCLIP21.45■■□□□ 1.02
HDAC5-208ENST00000588419 STRCP1A6NGW2 1772 aa21.45■■□□□ 1.02
HDAC5-208ENST00000588419 PIP4K2BP78356 416 aa21.44■■□□□ 1.02
HDAC5-208ENST00000588419 ILDR2Q71H61 639 aa21.44■■□□□ 1.02
HDAC5-208ENST00000588419 MED14O60244 1454 aa21.43■■□□□ 1.02
HDAC5-208ENST00000588419 CHIC2Q9UKJ5 165 aa21.42■■□□□ 1.02
HDAC5-208ENST00000588419 PIK3C2BO00750 1634 aa21.41■■□□□ 1.02
HDAC5-208ENST00000588419 SYNMO15061 1565 aa21.39■■□□□ 1.01
HDAC5-208ENST00000588419 KANK1Q14678 1352 aa21.38■■□□□ 1.01
HDAC5-208ENST00000588419 ANKRD30AQ9BXX3 1397 aa21.36■■□□□ 1.01
HDAC5-208ENST00000588419 TOM1O60784 492 aa21.36■■□□□ 1.01
HDAC5-208ENST00000588419 SCAF11Q99590 1463 aaKnown RBP21.36■■□□□ 1.01
HDAC5-208ENST00000588419 ARHGAP31Q2M1Z3 1444 aa21.34■■□□□ 1.01
HDAC5-208ENST00000588419 FAM50AQ14320 339 aaKnown RBP21.33■■□□□ 1.01
HDAC5-208ENST00000588419 SENP3Q9H4L4 574 aaPredicted RBP21.33■■□□□ 1.01
HDAC5-208ENST00000588419 HSPA1LP34931 641 aa21.32■■□□□ 1
HDAC5-208ENST00000588419 STAG3Q9UJ98 1225 aa21.32■■□□□ 1
HDAC5-208ENST00000588419 SLIT1O75093 1534 aa21.31■■□□□ 1
HDAC5-208ENST00000588419 LRRC7Q96NW7 1537 aa21.3■■□□□ 1
HDAC5-208ENST00000588419 ALKQ9UM73 1620 aa21.3■■□□□ 1
HDAC5-208ENST00000588419 XIRP1Q702N8 1843 aaKnown RBP21.3■■□□□ 1
HDAC5-208ENST00000588419 MED1Q15648 1581 aaPredicted RBP21.3■■□□□ 1
HDAC5-208ENST00000588419 EFCAB6Q5THR3 1501 aa21.29■■□□□ 1
HDAC5-208ENST00000588419 ARHGAP23Q9P227 1491 aa21.29■■□□□ 1
HDAC5-208ENST00000588419 TXNDC2Q86VQ3 553 aa21.29■■□□□ 1
HDAC5-208ENST00000588419 MYO5BQ9ULV0 1848 aa21.29■■□□□ 1
HDAC5-208ENST00000588419 LMTK2Q8IWU2 1503 aa21.29■■□□□ 1
HDAC5-208ENST00000588419 KDM5AP29375 1690 aaKnown RBP21.28■■□□□ 1
HDAC5-208ENST00000588419 SOCS7O14512 581 aa21.27■■□□□ 1
HDAC5-208ENST00000588419 LTKP29376 864 aa21.27■■□□□ 1
HDAC5-208ENST00000588419 EID1Q9Y6B2 187 aa21.27■■□□□ 1
HDAC5-208ENST00000588419 ADGRL2O95490 1459 aa21.26■□□□□ 0.99
HDAC5-208ENST00000588419 GCC2Q8IWJ2 1684 aa21.24■□□□□ 0.99
HDAC5-208ENST00000588419 ADGRB3O60242 1522 aa21.24■□□□□ 0.99
HDAC5-208ENST00000588419 TMEM2Q9UHN6 1383 aa21.23■□□□□ 0.99
HDAC5-208ENST00000588419 TET3O43151 1660 aa21.22■□□□□ 0.99
HDAC5-208ENST00000588419 ANKRD50Q9ULJ7 1429 aa21.21■□□□□ 0.99
HDAC5-208ENST00000588419 IDI1Q13907 227 aa21.19■□□□□ 0.98
HDAC5-208ENST00000588419 NOS1P29475 1434 aa21.18■□□□□ 0.98
HDAC5-208ENST00000588419 UNC13BO14795 1591 aa21.18■□□□□ 0.98
HDAC5-208ENST00000588419 BCANQ96GW7 911 aa21.16■□□□□ 0.98
HDAC5-208ENST00000588419 E9PCH4 1651 aa21.15■□□□□ 0.98
HDAC5-208ENST00000588419 PHF23Q9BUL5 403 aaPredicted RBP21.14■□□□□ 0.97
HDAC5-208ENST00000588419 RPRD2Q5VT52 1461 aaKnown RBP21.13■□□□□ 0.97
HDAC5-208ENST00000588419 SLC26A8Q96RN1 970 aa21.13■□□□□ 0.97
HDAC5-208ENST00000588419 ITGAEP38570 1179 aa21.11■□□□□ 0.97
HDAC5-208ENST00000588419 PPARGC1BQ86YN6 1023 aaKnown RBP21.1■□□□□ 0.97
Retrieved 100 of 20,778 RNA–protein pairs in 12.8 ms