RNA–Protein interactions for RNA: ENST00000588329.5

RAD23A-204, Transcript of RAD23 homolog A, nucleotide excision repair protein, humanhuman

TSL 5

Gene RAD23A, Length 1,034 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAD23A-204ENST00000588329 FBXO31Q5XUX0 539 aaPredicted RBP28■■■□□ 2.07
RAD23A-204ENST00000588329 PTPN23Q9H3S7 1636 aa27.95■■■□□ 2.06
RAD23A-204ENST00000588329 NCKAP5LQ9HCH0 1330 aa27.94■■■□□ 2.06
RAD23A-204ENST00000588329 PTPRTO14522 1441 aa27.94■■■□□ 2.06
RAD23A-204ENST00000588329 RRP7BPQ9NSQ0 103 aa27.94■■■□□ 2.06
RAD23A-204ENST00000588329 MAST1Q9Y2H9 1570 aa27.94■■■□□ 2.06
RAD23A-204ENST00000588329 CAMSAP1Q5T5Y3 1602 aa27.93■■■□□ 2.06
RAD23A-204ENST00000588329 LTBP4Q8N2S1 1624 aa27.93■■■□□ 2.06
RAD23A-204ENST00000588329 CHIC2Q9UKJ5 165 aa27.93■■■□□ 2.06
RAD23A-204ENST00000588329 ABCC5O15440 1437 aa27.92■■■□□ 2.06
RAD23A-204ENST00000588329 MYO3AQ8NEV4 1616 aa27.92■■■□□ 2.06
RAD23A-204ENST00000588329 KDM5DQ9BY66 1539 aa27.92■■■□□ 2.06
RAD23A-204ENST00000588329 FGD6Q6ZV73 1430 aa27.92■■■□□ 2.06
RAD23A-204ENST00000588329 NCOA1Q15788 1441 aa27.91■■■□□ 2.06
RAD23A-204ENST00000588329 FAM50AQ14320 339 aaKnown RBP27.88■■■□□ 2.05
RAD23A-204ENST00000588329 TNRQ92752 1358 aa27.87■■■□□ 2.05
RAD23A-204ENST00000588329 CEP170BQ9Y4F5 1589 aaPredicted RBP27.87■■■□□ 2.05
RAD23A-204ENST00000588329 PPARGC1BQ86YN6 1023 aaKnown RBP27.87■■■□□ 2.05
RAD23A-204ENST00000588329 KIF15Q9NS87 1388 aa27.86■■■□□ 2.05
RAD23A-204ENST00000588329 DAPK1P53355 1430 aa27.86■■■□□ 2.05
RAD23A-204ENST00000588329 GRWD1Q9BQ67 446 aaKnown RBP eCLIP27.85■■■□□ 2.052e-7■■■□□ 15.8
RAD23A-204ENST00000588329 PZPP20742 1482 aa27.84■■■□□ 2.05
RAD23A-204ENST00000588329 IQSEC2Q5JU85 1478 aa27.83■■■□□ 2.05
RAD23A-204ENST00000588329 TCOF1Q13428 1488 aaKnown RBP27.82■■■□□ 2.04
RAD23A-204ENST00000588329 DUOX2Q9NRD8 1548 aa27.82■■■□□ 2.04
RAD23A-204ENST00000588329 A2ML1A8K2U0 1454 aa27.8■■■□□ 2.04
RAD23A-204ENST00000588329 CROCC2H7BZ55 1655 aa27.8■■■□□ 2.04
RAD23A-204ENST00000588329 ZNF142P52746 1687 aaPredicted RBP27.8■■■□□ 2.04
RAD23A-204ENST00000588329 DNMT1P26358 1616 aaKnown RBP27.79■■■□□ 2.04
RAD23A-204ENST00000588329 RNF17Q9BXT8 1623 aaKnown RBP27.79■■■□□ 2.04
RAD23A-204ENST00000588329 ABCC3O15438 1527 aa27.79■■■□□ 2.04
RAD23A-204ENST00000588329 SHANK2Q9UPX8 1470 aa27.79■■■□□ 2.04
RAD23A-204ENST00000588329 EIF2AK4Q9P2K8 1649 aaKnown RBP27.77■■■□□ 2.04
RAD23A-204ENST00000588329 FAM135AQ9P2D6 1515 aa27.77■■■□□ 2.04
RAD23A-204ENST00000588329 MROH1Q8NDA8 1641 aa27.75■■■□□ 2.03
RAD23A-204ENST00000588329 PKD2Q13563 968 aa27.75■■■□□ 2.03
RAD23A-204ENST00000588329 ANKRD30AQ9BXX3 1397 aa27.73■■■□□ 2.03
RAD23A-204ENST00000588329 ZNF335Q9H4Z2 1342 aaPredicted RBP27.73■■■□□ 2.03
RAD23A-204ENST00000588329 PLA2R1Q13018 1463 aa27.73■■■□□ 2.03
RAD23A-204ENST00000588329 CEP152O94986 1710 aa27.72■■■□□ 2.03
RAD23A-204ENST00000588329 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP27.72■■■□□ 2.03
RAD23A-204ENST00000588329 ERBINQ96RT1 1412 aa27.71■■■□□ 2.03
RAD23A-204ENST00000588329 CFAP65Q6ZU64 1925 aaKnown RBP27.7■■■□□ 2.02
RAD23A-204ENST00000588329 ZC3H13Q5T200 1668 aaKnown RBP27.68■■■□□ 2.02
RAD23A-204ENST00000588329 THEMISQ8N1K5 641 aaPredicted RBP27.67■■■□□ 2.02
RAD23A-204ENST00000588329 ERVK-7P63135 1459 aa27.66■■■□□ 2.02
RAD23A-204ENST00000588329 ITGAEP38570 1179 aa27.66■■■□□ 2.02
RAD23A-204ENST00000588329 NLRP1Q9C000 1473 aa27.65■■■□□ 2.02
RAD23A-204ENST00000588329 UGGT1Q9NYU2 1555 aa27.65■■■□□ 2.02
RAD23A-204ENST00000588329 KANK1Q14678 1352 aa27.64■■■□□ 2.02
RAD23A-204ENST00000588329 ANKLE2Q86XL3 938 aa27.64■■■□□ 2.02
RAD23A-204ENST00000588329 PRDM15P57071 1507 aaPredicted RBP27.62■■■□□ 2.01
RAD23A-204ENST00000588329 UBAP1LF5GYI3 381 aa27.58■■■□□ 2.01
RAD23A-204ENST00000588329 ADGRL2O95490 1459 aa27.57■■■□□ 2
RAD23A-204ENST00000588329 NEURL4Q96JN8 1562 aa27.56■■■□□ 2
RAD23A-204ENST00000588329 DEPDC5O75140 1603 aa27.56■■■□□ 2
RAD23A-204ENST00000588329 POLR1AO95602 1720 aaPredicted RBP27.55■■■□□ 2
RAD23A-204ENST00000588329 ANKRD50Q9ULJ7 1429 aa27.55■■■□□ 2
RAD23A-204ENST00000588329 ARHGAP31Q2M1Z3 1444 aa27.53■■■□□ 2
RAD23A-204ENST00000588329 STAG3Q9UJ98 1225 aa27.52■■■□□ 2
RAD23A-204ENST00000588329 NPHP4O75161 1426 aaPredicted RBP27.51■■□□□ 1.99
RAD23A-204ENST00000588329 MED1Q15648 1581 aaPredicted RBP27.47■■□□□ 1.99
RAD23A-204ENST00000588329 TXNDC2Q86VQ3 553 aa27.46■■□□□ 1.99
RAD23A-204ENST00000588329 UBR1Q8IWV7 1749 aa27.46■■□□□ 1.99
RAD23A-204ENST00000588329 VWDEQ8N2E2 1590 aa27.45■■□□□ 1.99
RAD23A-204ENST00000588329 LTKP29376 864 aa27.45■■□□□ 1.98
RAD23A-204ENST00000588329 IDI1Q13907 227 aa27.45■■□□□ 1.98
RAD23A-204ENST00000588329 LMTK2Q8IWU2 1503 aa27.44■■□□□ 1.98
RAD23A-204ENST00000588329 PIK3C2BO00750 1634 aa27.42■■□□□ 1.98
RAD23A-204ENST00000588329 SENP3Q9H4L4 574 aaPredicted RBP27.42■■□□□ 1.98
RAD23A-204ENST00000588329 MED14O60244 1454 aa27.42■■□□□ 1.98
RAD23A-204ENST00000588329 EFCAB6Q5THR3 1501 aa27.41■■□□□ 1.98
RAD23A-204ENST00000588329 RRBP1Q9P2E9 1410 aaKnown RBP27.41■■□□□ 1.98
RAD23A-204ENST00000588329 IQGAP1P46940 1657 aa27.4■■□□□ 1.98
RAD23A-204ENST00000588329 SCAF1Q9H7N4 1312 aaKnown RBP27.4■■□□□ 1.98
RAD23A-204ENST00000588329 EID1Q9Y6B2 187 aa27.39■■□□□ 1.98
RAD23A-204ENST00000588329 SCAF11Q99590 1463 aaKnown RBP27.38■■□□□ 1.97
RAD23A-204ENST00000588329 SYNMO15061 1565 aa27.38■■□□□ 1.97
RAD23A-204ENST00000588329 ROCK1Q13464 1354 aa27.37■■□□□ 1.97
RAD23A-204ENST00000588329 PIP4K2BP78356 416 aa27.36■■□□□ 1.97
RAD23A-204ENST00000588329 NOS1P29475 1434 aa27.35■■□□□ 1.97
RAD23A-204ENST00000588329 HSPA1LP34931 641 aa27.35■■□□□ 1.97
RAD23A-204ENST00000588329 TMEM2Q9UHN6 1383 aa27.35■■□□□ 1.97
RAD23A-204ENST00000588329 CPS1P31327 1500 aa27.34■■□□□ 1.97
RAD23A-204ENST00000588329 ARHGAP23Q9P227 1491 aa27.33■■□□□ 1.97
RAD23A-204ENST00000588329 SLIT1O75093 1534 aa27.32■■□□□ 1.96
RAD23A-204ENST00000588329 CHGAP10645 457 aaKnown RBP27.32■■□□□ 1.96
RAD23A-204ENST00000588329 NUP155O75694 1391 aa27.32■■□□□ 1.96
RAD23A-204ENST00000588329 BCANQ96GW7 911 aa27.3■■□□□ 1.96
RAD23A-204ENST00000588329 SLC52A1Q9NWF4 448 aa27.3■■□□□ 1.96
RAD23A-204ENST00000588329 UNC13BO14795 1591 aa27.3■■□□□ 1.96
RAD23A-204ENST00000588329 TET3O43151 1660 aa27.29■■□□□ 1.96
RAD23A-204ENST00000588329 SLC26A8Q96RN1 970 aa27.27■■□□□ 1.96
RAD23A-204ENST00000588329 RPRD2Q5VT52 1461 aaKnown RBP27.26■■□□□ 1.95
RAD23A-204ENST00000588329 TOM1O60784 492 aa27.26■■□□□ 1.95
RAD23A-204ENST00000588329 STRCP1A6NGW2 1772 aa27.26■■□□□ 1.95
RAD23A-204ENST00000588329 ADGRB3O60242 1522 aa27.25■■□□□ 1.95
RAD23A-204ENST00000588329 NUTM2DQ5VT03 806 aaPredicted RBP27.23■■□□□ 1.95
RAD23A-204ENST00000588329 GCC2Q8IWJ2 1684 aa27.22■■□□□ 1.95
RAD23A-204ENST00000588329 ALKQ9UM73 1620 aa27.22■■□□□ 1.95
Retrieved 100 of 20,778 RNA–protein pairs in 39.6 ms