RNA–Protein interactions for RNA: ENST00000588275.2

LINC01842-201, Transcript of long intergenic non-protein coding RNA 1842, humanhuman

TSL 1 (best) BASIC

Gene LINC01842, Length 768 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01842-201ENST00000588275 ZNF335Q9H4Z2 1342 aaPredicted RBP26.67■■□□□ 1.86
LINC01842-201ENST00000588275 TCOF1Q13428 1488 aaKnown RBP26.67■■□□□ 1.86
LINC01842-201ENST00000588275 TSPY4P0CV99 314 aa26.66■■□□□ 1.86
LINC01842-201ENST00000588275 TSPY10P0CW01 314 aa26.66■■□□□ 1.86
LINC01842-201ENST00000588275 IQSEC2Q5JU85 1478 aa26.66■■□□□ 1.86
LINC01842-201ENST00000588275 DNMT1P26358 1616 aaKnown RBP26.65■■□□□ 1.86
LINC01842-201ENST00000588275 FBXO31Q5XUX0 539 aaPredicted RBP26.65■■□□□ 1.86
LINC01842-201ENST00000588275 WASHC2CQ9Y4E1 1318 aa26.65■■□□□ 1.86
LINC01842-201ENST00000588275 TNRQ92752 1358 aa26.64■■□□□ 1.86
LINC01842-201ENST00000588275 PZPP20742 1482 aa26.62■■□□□ 1.85
LINC01842-201ENST00000588275 FAM135AQ9P2D6 1515 aa26.62■■□□□ 1.85
LINC01842-201ENST00000588275 DISP3Q9P2K9 1392 aa26.61■■□□□ 1.85
LINC01842-201ENST00000588275 KANK4Q5T7N3 995 aaPredicted RBP26.59■■□□□ 1.85
LINC01842-201ENST00000588275 POLR1AO95602 1720 aaPredicted RBP26.58■■□□□ 1.85
LINC01842-201ENST00000588275 MAST1Q9Y2H9 1570 aa26.55■■□□□ 1.84
LINC01842-201ENST00000588275 UBAP1LF5GYI3 381 aa26.54■■□□□ 1.84
LINC01842-201ENST00000588275 MYOM3Q5VTT5 1437 aa26.54■■□□□ 1.84
LINC01842-201ENST00000588275 MAP3K1Q13233 1512 aa26.53■■□□□ 1.84
LINC01842-201ENST00000588275 RNF17Q9BXT8 1623 aaKnown RBP26.53■■□□□ 1.84
LINC01842-201ENST00000588275 SPATA31D1Q6ZQQ2 1576 aa26.51■■□□□ 1.83
LINC01842-201ENST00000588275 NEURL4Q96JN8 1562 aa26.51■■□□□ 1.83
LINC01842-201ENST00000588275 MIA2Q96PC5 1412 aa26.51■■□□□ 1.83
LINC01842-201ENST00000588275 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP26.5■■□□□ 1.83
LINC01842-201ENST00000588275 ZC3H13Q5T200 1668 aaKnown RBP26.49■■□□□ 1.83
LINC01842-201ENST00000588275 EIF2AK4Q9P2K8 1649 aaKnown RBP26.49■■□□□ 1.83
LINC01842-201ENST00000588275 UGGT1Q9NYU2 1555 aa26.49■■□□□ 1.83
LINC01842-201ENST00000588275 ABCC3O15438 1527 aa26.49■■□□□ 1.83
LINC01842-201ENST00000588275 NLRP1Q9C000 1473 aa26.49■■□□□ 1.83
LINC01842-201ENST00000588275 ANKLE2Q86XL3 938 aa26.46■■□□□ 1.83
LINC01842-201ENST00000588275 THEMISQ8N1K5 641 aaPredicted RBP26.46■■□□□ 1.83
LINC01842-201ENST00000588275 CEP152O94986 1710 aa26.45■■□□□ 1.83
LINC01842-201ENST00000588275 APLP2Q06481 763 aa26.44■■□□□ 1.82
LINC01842-201ENST00000588275 ILDR2Q71H61 639 aa26.44■■□□□ 1.82
LINC01842-201ENST00000588275 MROH1Q8NDA8 1641 aa26.43■■□□□ 1.82
LINC01842-201ENST00000588275 DUOX2Q9NRD8 1548 aa26.42■■□□□ 1.82
LINC01842-201ENST00000588275 SHANK2Q9UPX8 1470 aa26.41■■□□□ 1.82
LINC01842-201ENST00000588275 SCAF1Q9H7N4 1312 aaKnown RBP26.4■■□□□ 1.82
LINC01842-201ENST00000588275 CPS1P31327 1500 aa26.4■■□□□ 1.82
LINC01842-201ENST00000588275 CFAP65Q6ZU64 1925 aaKnown RBP26.4■■□□□ 1.82
LINC01842-201ENST00000588275 ERVK-7P63135 1459 aa26.4■■□□□ 1.82
LINC01842-201ENST00000588275 CROCC2H7BZ55 1655 aa26.4■■□□□ 1.82
LINC01842-201ENST00000588275 NPHP4O75161 1426 aaPredicted RBP26.39■■□□□ 1.82
LINC01842-201ENST00000588275 PTPN23Q9H3S7 1636 aa26.39■■□□□ 1.82
LINC01842-201ENST00000588275 KIF15Q9NS87 1388 aa26.37■■□□□ 1.81
LINC01842-201ENST00000588275 DEPDC5O75140 1603 aa26.37■■□□□ 1.81
LINC01842-201ENST00000588275 IQGAP1P46940 1657 aa26.36■■□□□ 1.81
LINC01842-201ENST00000588275 ABCC5O15440 1437 aa26.35■■□□□ 1.81
LINC01842-201ENST00000588275 PIP4K2BP78356 416 aa26.35■■□□□ 1.81
LINC01842-201ENST00000588275 VWDEQ8N2E2 1590 aa26.35■■□□□ 1.81
LINC01842-201ENST00000588275 RRP7BPQ9NSQ0 103 aa26.35■■□□□ 1.81
LINC01842-201ENST00000588275 MED14O60244 1454 aa26.34■■□□□ 1.81
LINC01842-201ENST00000588275 ERBINQ96RT1 1412 aa26.31■■□□□ 1.8
LINC01842-201ENST00000588275 PRDM15P57071 1507 aaPredicted RBP26.31■■□□□ 1.8
LINC01842-201ENST00000588275 GRWD1Q9BQ67 446 aaKnown RBP eCLIP26.31■■□□□ 1.8
LINC01842-201ENST00000588275 DAPK1P53355 1430 aa26.31■■□□□ 1.8
LINC01842-201ENST00000588275 TOM1O60784 492 aa26.3■■□□□ 1.8
LINC01842-201ENST00000588275 UBR1Q8IWV7 1749 aa26.3■■□□□ 1.8
LINC01842-201ENST00000588275 FGD6Q6ZV73 1430 aa26.29■■□□□ 1.8
LINC01842-201ENST00000588275 SOCS7O14512 581 aa26.27■■□□□ 1.8
LINC01842-201ENST00000588275 CHIC2Q9UKJ5 165 aa26.26■■□□□ 1.79
LINC01842-201ENST00000588275 HSPA1LP34931 641 aa26.24■■□□□ 1.79
LINC01842-201ENST00000588275 STRCP1A6NGW2 1772 aa26.23■■□□□ 1.79
LINC01842-201ENST00000588275 KANK1Q14678 1352 aa26.23■■□□□ 1.79
LINC01842-201ENST00000588275 ARHGAP31Q2M1Z3 1444 aa26.22■■□□□ 1.79
LINC01842-201ENST00000588275 SCAF11Q99590 1463 aaKnown RBP26.22■■□□□ 1.79
LINC01842-201ENST00000588275 ANKRD30AQ9BXX3 1397 aa26.2■■□□□ 1.79
LINC01842-201ENST00000588275 PIK3C2BO00750 1634 aa26.19■■□□□ 1.78
LINC01842-201ENST00000588275 SYNMO15061 1565 aa26.19■■□□□ 1.78
LINC01842-201ENST00000588275 TXNDC2Q86VQ3 553 aa26.18■■□□□ 1.78
LINC01842-201ENST00000588275 LRRC7Q96NW7 1537 aa26.18■■□□□ 1.78
LINC01842-201ENST00000588275 STAG3Q9UJ98 1225 aa26.17■■□□□ 1.78
LINC01842-201ENST00000588275 SLIT1O75093 1534 aa26.16■■□□□ 1.78
LINC01842-201ENST00000588275 LTKP29376 864 aa26.16■■□□□ 1.78
LINC01842-201ENST00000588275 SENP3Q9H4L4 574 aaPredicted RBP26.16■■□□□ 1.78
LINC01842-201ENST00000588275 ARHGAP23Q9P227 1491 aa26.16■■□□□ 1.78
LINC01842-201ENST00000588275 ALKQ9UM73 1620 aa26.15■■□□□ 1.78
LINC01842-201ENST00000588275 FAM50AQ14320 339 aaKnown RBP26.14■■□□□ 1.78
LINC01842-201ENST00000588275 EID1Q9Y6B2 187 aa26.14■■□□□ 1.78
LINC01842-201ENST00000588275 MED1Q15648 1581 aaPredicted RBP26.13■■□□□ 1.77
LINC01842-201ENST00000588275 LMTK2Q8IWU2 1503 aa26.11■■□□□ 1.77
LINC01842-201ENST00000588275 EFCAB6Q5THR3 1501 aa26.09■■□□□ 1.77
LINC01842-201ENST00000588275 TMEM2Q9UHN6 1383 aa26.08■■□□□ 1.77
LINC01842-201ENST00000588275 ADGRL2O95490 1459 aa26.07■■□□□ 1.76
LINC01842-201ENST00000588275 IDI1Q13907 227 aa26.06■■□□□ 1.76
LINC01842-201ENST00000588275 KDM5AP29375 1690 aaKnown RBP26.04■■□□□ 1.76
LINC01842-201ENST00000588275 ANKRD50Q9ULJ7 1429 aa26.02■■□□□ 1.76
LINC01842-201ENST00000588275 ADGRB3O60242 1522 aa26.02■■□□□ 1.76
LINC01842-201ENST00000588275 XIRP1Q702N8 1843 aaKnown RBP26.02■■□□□ 1.76
LINC01842-201ENST00000588275 NOS1P29475 1434 aa26.01■■□□□ 1.75
LINC01842-201ENST00000588275 PHF23Q9BUL5 403 aaPredicted RBP26■■□□□ 1.75
LINC01842-201ENST00000588275 BCANQ96GW7 911 aa25.97■■□□□ 1.75
LINC01842-201ENST00000588275 SLC26A8Q96RN1 970 aa25.97■■□□□ 1.75
LINC01842-201ENST00000588275 TET3O43151 1660 aa25.94■■□□□ 1.74
LINC01842-201ENST00000588275 SLC52A1Q9NWF4 448 aa25.94■■□□□ 1.74
LINC01842-201ENST00000588275 RPRD2Q5VT52 1461 aaKnown RBP25.93■■□□□ 1.74
LINC01842-201ENST00000588275 TMEM94Q12767 1356 aa25.93■■□□□ 1.74
LINC01842-201ENST00000588275 MYO5BQ9ULV0 1848 aa25.92■■□□□ 1.74
LINC01842-201ENST00000588275 GCC2Q8IWJ2 1684 aa25.91■■□□□ 1.74
LINC01842-201ENST00000588275 KCNA6P17658 529 aa25.91■■□□□ 1.74
LINC01842-201ENST00000588275 RBM33Q96EV2 1170 aaKnown RBP25.9■■□□□ 1.74
Retrieved 100 of 20,778 RNA–protein pairs in 7.8 ms