RNA–Protein interactions for RNA: ENST00000586884.1

MBD1-215, Transcript of methyl-CpG binding domain protein 1, humanhuman

TSL 3

Gene MBD1, Length 514 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MBD1-215ENST00000586884 KDM5DQ9BY66 1539 aa24.25■■□□□ 1.47
MBD1-215ENST00000586884 LRRC9Q6ZRR7 1453 aa24.24■■□□□ 1.47
MBD1-215ENST00000586884 TSPY4P0CV99 314 aa24.23■■□□□ 1.47
MBD1-215ENST00000586884 TSPY10P0CW01 314 aa24.23■■□□□ 1.47
MBD1-215ENST00000586884 PZPP20742 1482 aa24.23■■□□□ 1.47
MBD1-215ENST00000586884 ZNF335Q9H4Z2 1342 aaPredicted RBP24.22■■□□□ 1.47
MBD1-215ENST00000586884 TNRQ92752 1358 aa24.21■■□□□ 1.47
MBD1-215ENST00000586884 DNMT1P26358 1616 aaKnown RBP24.21■■□□□ 1.47
MBD1-215ENST00000586884 WASHC2CQ9Y4E1 1318 aa24.2■■□□□ 1.46
MBD1-215ENST00000586884 FBXO31Q5XUX0 539 aaPredicted RBP24.18■■□□□ 1.46
MBD1-215ENST00000586884 MAP3K1Q13233 1512 aa24.18■■□□□ 1.46
MBD1-215ENST00000586884 DISP3Q9P2K9 1392 aa24.16■■□□□ 1.46
MBD1-215ENST00000586884 MAST1Q9Y2H9 1570 aa24.15■■□□□ 1.46
MBD1-215ENST00000586884 LOC105371045A0A1W2PR82 267 aa24.14■■□□□ 1.45
MBD1-215ENST00000586884 MIA2Q96PC5 1412 aa24.13■■□□□ 1.45
MBD1-215ENST00000586884 NLRP1Q9C000 1473 aa24.13■■□□□ 1.45
MBD1-215ENST00000586884 MYOM3Q5VTT5 1437 aa24.1■■□□□ 1.45
MBD1-215ENST00000586884 RNF17Q9BXT8 1623 aaKnown RBP24.1■■□□□ 1.45
MBD1-215ENST00000586884 KANK4Q5T7N3 995 aaPredicted RBP24.1■■□□□ 1.45
MBD1-215ENST00000586884 UBAP1LF5GYI3 381 aa24.09■■□□□ 1.45
MBD1-215ENST00000586884 POLR1AO95602 1720 aaPredicted RBP24.09■■□□□ 1.45
MBD1-215ENST00000586884 NEURL4Q96JN8 1562 aa24.08■■□□□ 1.45
MBD1-215ENST00000586884 THEMISQ8N1K5 641 aaPredicted RBP24.08■■□□□ 1.45
MBD1-215ENST00000586884 EIF2AK4Q9P2K8 1649 aaKnown RBP24.07■■□□□ 1.44
MBD1-215ENST00000586884 ZC3H13Q5T200 1668 aaKnown RBP24.07■■□□□ 1.44
MBD1-215ENST00000586884 ABCC3O15438 1527 aa24.06■■□□□ 1.44
MBD1-215ENST00000586884 ANKLE2Q86XL3 938 aa24.06■■□□□ 1.44
MBD1-215ENST00000586884 SPATA31D1Q6ZQQ2 1576 aa24.06■■□□□ 1.44
MBD1-215ENST00000586884 UGGT1Q9NYU2 1555 aa24.06■■□□□ 1.44
MBD1-215ENST00000586884 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP24.05■■□□□ 1.44
MBD1-215ENST00000586884 CPS1P31327 1500 aa24.05■■□□□ 1.44
MBD1-215ENST00000586884 SHANK2Q9UPX8 1470 aa24.02■■□□□ 1.44
MBD1-215ENST00000586884 DUOX2Q9NRD8 1548 aa24.01■■□□□ 1.43
MBD1-215ENST00000586884 ILDR2Q71H61 639 aa24.01■■□□□ 1.43
MBD1-215ENST00000586884 MED14O60244 1454 aa24■■□□□ 1.43
MBD1-215ENST00000586884 DEPDC5O75140 1603 aa24■■□□□ 1.43
MBD1-215ENST00000586884 MROH1Q8NDA8 1641 aa24■■□□□ 1.43
MBD1-215ENST00000586884 NPHP4O75161 1426 aaPredicted RBP23.99■■□□□ 1.43
MBD1-215ENST00000586884 ERVK-7P63135 1459 aa23.99■■□□□ 1.43
MBD1-215ENST00000586884 VWDEQ8N2E2 1590 aa23.96■■□□□ 1.43
MBD1-215ENST00000586884 KIF15Q9NS87 1388 aa23.95■■□□□ 1.42
MBD1-215ENST00000586884 APLP2Q06481 763 aa23.95■■□□□ 1.42
MBD1-215ENST00000586884 ERBINQ96RT1 1412 aa23.94■■□□□ 1.42
MBD1-215ENST00000586884 ABCC5O15440 1437 aa23.93■■□□□ 1.42
MBD1-215ENST00000586884 SOCS7O14512 581 aa23.93■■□□□ 1.42
MBD1-215ENST00000586884 TOM1O60784 492 aa23.93■■□□□ 1.42
MBD1-215ENST00000586884 PRDM15P57071 1507 aaPredicted RBP23.92■■□□□ 1.42
MBD1-215ENST00000586884 IQGAP1P46940 1657 aa23.92■■□□□ 1.42
MBD1-215ENST00000586884 PTPN23Q9H3S7 1636 aa23.92■■□□□ 1.42
MBD1-215ENST00000586884 CEP152O94986 1710 aa23.91■■□□□ 1.42
MBD1-215ENST00000586884 CROCC2H7BZ55 1655 aa23.91■■□□□ 1.42
MBD1-215ENST00000586884 ARHGAP31Q2M1Z3 1444 aa23.91■■□□□ 1.42
MBD1-215ENST00000586884 DAPK1P53355 1430 aa23.88■■□□□ 1.41
MBD1-215ENST00000586884 RRP7BPQ9NSQ0 103 aa23.88■■□□□ 1.41
MBD1-215ENST00000586884 SCAF1Q9H7N4 1312 aaKnown RBP23.87■■□□□ 1.41
MBD1-215ENST00000586884 FGD6Q6ZV73 1430 aa23.87■■□□□ 1.41
MBD1-215ENST00000586884 PIP4K2BP78356 416 aa23.87■■□□□ 1.41
MBD1-215ENST00000586884 UBR1Q8IWV7 1749 aa23.86■■□□□ 1.41
MBD1-215ENST00000586884 SCAF11Q99590 1463 aaKnown RBP23.84■■□□□ 1.41
MBD1-215ENST00000586884 KANK1Q14678 1352 aa23.83■■□□□ 1.41
MBD1-215ENST00000586884 HSPA1LP34931 641 aa23.83■■□□□ 1.41
MBD1-215ENST00000586884 ARHGAP23Q9P227 1491 aa23.82■■□□□ 1.4
MBD1-215ENST00000586884 SLIT1O75093 1534 aa23.82■■□□□ 1.4
MBD1-215ENST00000586884 ANKRD30AQ9BXX3 1397 aa23.81■■□□□ 1.4
MBD1-215ENST00000586884 GRWD1Q9BQ67 446 aaKnown RBP eCLIP23.81■■□□□ 1.4
MBD1-215ENST00000586884 SYNMO15061 1565 aa23.81■■□□□ 1.4
MBD1-215ENST00000586884 LRRC7Q96NW7 1537 aa23.8■■□□□ 1.4
MBD1-215ENST00000586884 TXNDC2Q86VQ3 553 aa23.78■■□□□ 1.4
MBD1-215ENST00000586884 LMTK2Q8IWU2 1503 aa23.78■■□□□ 1.4
MBD1-215ENST00000586884 ALKQ9UM73 1620 aa23.77■■□□□ 1.4
MBD1-215ENST00000586884 LTKP29376 864 aa23.77■■□□□ 1.4
MBD1-215ENST00000586884 EID1Q9Y6B2 187 aa23.77■■□□□ 1.4
MBD1-215ENST00000586884 STRCP1A6NGW2 1772 aa23.76■■□□□ 1.39
MBD1-215ENST00000586884 CFAP65Q6ZU64 1925 aaKnown RBP23.75■■□□□ 1.39
MBD1-215ENST00000586884 CHIC2Q9UKJ5 165 aa23.75■■□□□ 1.39
MBD1-215ENST00000586884 TMEM2Q9UHN6 1383 aa23.74■■□□□ 1.39
MBD1-215ENST00000586884 PIK3C2BO00750 1634 aa23.73■■□□□ 1.39
MBD1-215ENST00000586884 MED1Q15648 1581 aaPredicted RBP23.73■■□□□ 1.39
MBD1-215ENST00000586884 STAG3Q9UJ98 1225 aa23.72■■□□□ 1.39
MBD1-215ENST00000586884 ADGRL2O95490 1459 aa23.72■■□□□ 1.39
MBD1-215ENST00000586884 KDM5AP29375 1690 aaKnown RBP23.71■■□□□ 1.39
MBD1-215ENST00000586884 EFCAB6Q5THR3 1501 aa23.7■■□□□ 1.38
MBD1-215ENST00000586884 IDI1Q13907 227 aa23.68■■□□□ 1.38
MBD1-215ENST00000586884 NOS1P29475 1434 aa23.67■■□□□ 1.38
MBD1-215ENST00000586884 FAM50AQ14320 339 aaKnown RBP23.65■■□□□ 1.38
MBD1-215ENST00000586884 ANKRD50Q9ULJ7 1429 aa23.64■■□□□ 1.37
MBD1-215ENST00000586884 SLC52A1Q9NWF4 448 aa23.63■■□□□ 1.37
MBD1-215ENST00000586884 ADGRB3O60242 1522 aa23.63■■□□□ 1.37
MBD1-215ENST00000586884 RPRD2Q5VT52 1461 aaKnown RBP23.62■■□□□ 1.37
MBD1-215ENST00000586884 TET3O43151 1660 aa23.59■■□□□ 1.37
MBD1-215ENST00000586884 KCNA6P17658 529 aa23.57■■□□□ 1.36
MBD1-215ENST00000586884 PHF23Q9BUL5 403 aaPredicted RBP23.57■■□□□ 1.36
MBD1-215ENST00000586884 XIRP1Q702N8 1843 aaKnown RBP23.56■■□□□ 1.36
MBD1-215ENST00000586884 SENP3Q9H4L4 574 aaPredicted RBP23.56■■□□□ 1.36
MBD1-215ENST00000586884 TMEM94Q12767 1356 aa23.55■■□□□ 1.36
MBD1-215ENST00000586884 SLC26A8Q96RN1 970 aa23.55■■□□□ 1.36
MBD1-215ENST00000586884 FAM135BQ49AJ0 1406 aa23.53■■□□□ 1.36
MBD1-215ENST00000586884 NKTRP30414 1462 aaKnown RBP23.52■■□□□ 1.36
MBD1-215ENST00000586884 NWD1Q149M9 1564 aa23.52■■□□□ 1.36
MBD1-215ENST00000586884 UNC13BO14795 1591 aa23.51■■□□□ 1.35
Retrieved 100 of 20,778 RNA–protein pairs in 16.1 ms