RNA–Protein interactions for RNA: ENST00000586588.5

DNMT1-207, Transcript of DNA methyltransferase 1, humanhuman

TSL 2

Gene DNMT1, Length 3,094 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DNMT1-207ENST00000586588 MYBBP1AQ9BQG0 1328 aaKnown RBP17.15■□□□□ 0.34
DNMT1-207ENST00000586588 RALBP1Q15311 655 aa17.15■□□□□ 0.34
DNMT1-207ENST00000586588 RRP9O43818 475 aaKnown RBP17.14■□□□□ 0.33
DNMT1-207ENST00000586588 KDM2BQ8NHM5 1336 aa17.14■□□□□ 0.33
DNMT1-207ENST00000586588 VSIG10Q8N0Z9 540 aa17.13■□□□□ 0.33
DNMT1-207ENST00000586588 USP47Q96K76 1375 aa17.13■□□□□ 0.33
DNMT1-207ENST00000586588 CARMIL2Q6F5E8 1435 aa17.13■□□□□ 0.33
DNMT1-207ENST00000586588 SHROOM2Q13796 1616 aa17.12■□□□□ 0.33
DNMT1-207ENST00000586588 PRG4Q92954 1404 aaPredicted RBP17.12■□□□□ 0.33
DNMT1-207ENST00000586588 SENP3-EIF4A1A0A087X0R7 540 aa17.12■□□□□ 0.33
DNMT1-207ENST00000586588 C8orf34Q49A92 452 aa17.12■□□□□ 0.33
DNMT1-207ENST00000586588 CHIC2Q9UKJ5 165 aa17.12■□□□□ 0.33
DNMT1-207ENST00000586588 MBD5Q9P267 1494 aa17.11■□□□□ 0.33
DNMT1-207ENST00000586588 FOXD1Q16676 465 aa17.11■□□□□ 0.33
DNMT1-207ENST00000586588 CENPQQ7L2Z9 268 aaPredicted RBP17.11■□□□□ 0.33
DNMT1-207ENST00000586588 ERCC6L2Q5T890 1561 aa17.11■□□□□ 0.33
DNMT1-207ENST00000586588 CRBNQ96SW2 442 aa17.11■□□□□ 0.33
DNMT1-207ENST00000586588 INSRP06213 1382 aa17.1■□□□□ 0.33
DNMT1-207ENST00000586588 ABCA8O94911 1581 aa17.1■□□□□ 0.33
DNMT1-207ENST00000586588 KDM5CP41229 1560 aa17.1■□□□□ 0.33
DNMT1-207ENST00000586588 CNGB1Q14028 1251 aaPredicted RBP17.09■□□□□ 0.33
DNMT1-207ENST00000586588 HSP90AA2PQ14568 343 aaPredicted RBP17.09■□□□□ 0.33
DNMT1-207ENST00000586588 SKAP1Q86WV1 359 aa17.08■□□□□ 0.33
DNMT1-207ENST00000586588 ZMYM4Q5VZL5 1548 aa17.07■□□□□ 0.32
DNMT1-207ENST00000586588 CLCN1P35523 988 aa17.07■□□□□ 0.32
DNMT1-207ENST00000586588 CLASP1Q7Z460 1538 aa17.07■□□□□ 0.32
DNMT1-207ENST00000586588 ROCK1Q13464 1354 aa17.06■□□□□ 0.32
DNMT1-207ENST00000586588 KIF14Q15058 1648 aa17.06■□□□□ 0.32
DNMT1-207ENST00000586588 HSP90AA1P07900 732 aaKnown RBP17.05■□□□□ 0.32
DNMT1-207ENST00000586588 POLR3GLQ9BT43 218 aa17.05■□□□□ 0.32
DNMT1-207ENST00000586588 POGKQ9P215 609 aa17.05■□□□□ 0.32
DNMT1-207ENST00000586588 PLIN1O60240 522 aa17.05■□□□□ 0.32
DNMT1-207ENST00000586588 PNNQ9H307 717 aaKnown RBP17.05■□□□□ 0.32
DNMT1-207ENST00000586588 NLRP13Q86W25 1043 aa17.04■□□□□ 0.32
DNMT1-207ENST00000586588 SLC24A1O60721 1099 aa17.03■□□□□ 0.32
DNMT1-207ENST00000586588 CDCA7LQ96GN5 454 aa17.02■□□□□ 0.32
DNMT1-207ENST00000586588 NAP1L5Q96NT1 182 aaPredicted RBP17.02■□□□□ 0.32
DNMT1-207ENST00000586588 PLEKHH2Q8IVE3 1493 aa17.02■□□□□ 0.31
DNMT1-207ENST00000586588 SLC4A1APQ9BWU0 796 aaKnown RBP17■□□□□ 0.31
DNMT1-207ENST00000586588 E9PCH4 1651 aa17■□□□□ 0.31
DNMT1-207ENST00000586588 ATP10BO94823 1461 aa17■□□□□ 0.31
DNMT1-207ENST00000586588 PTPRGP23470 1445 aa17■□□□□ 0.31
DNMT1-207ENST00000586588 PARD3Q8TEW0 1356 aa16.99■□□□□ 0.31
DNMT1-207ENST00000586588 BLMP54132 1417 aaPredicted RBP16.99■□□□□ 0.31
DNMT1-207ENST00000586588 UHRF1BP1Q6BDS2 1440 aa16.99■□□□□ 0.31
DNMT1-207ENST00000586588 TROQ12816 1431 aaPredicted RBP16.98■□□□□ 0.31
DNMT1-207ENST00000586588 RALGAPBQ86X10 1494 aa16.98■□□□□ 0.31
DNMT1-207ENST00000586588 BECN1Q14457 450 aa16.97■□□□□ 0.31
DNMT1-207ENST00000586588 FSD2A1L4K1 749 aa16.96■□□□□ 0.31
DNMT1-207ENST00000586588 ADCY10Q96PN6 1610 aa16.96■□□□□ 0.31
DNMT1-207ENST00000586588 XRCC6P12956 609 aaKnown RBP eCLIP16.95■□□□□ 0.3
DNMT1-207ENST00000586588 C20orf194Q5TEA3 1177 aa16.95■□□□□ 0.3
DNMT1-207ENST00000586588 VIRMAQ69YN4 1812 aaKnown RBP16.94■□□□□ 0.3
DNMT1-207ENST00000586588 GOLGA6L3A6NEY3 463 aa16.94■□□□□ 0.3
DNMT1-207ENST00000586588 USP19O94966 1318 aa16.94■□□□□ 0.3
DNMT1-207ENST00000586588 DAPK1P53355 1430 aa16.94■□□□□ 0.3
DNMT1-207ENST00000586588 PZPP20742 1482 aa16.93■□□□□ 0.3
DNMT1-207ENST00000586588 ANTXR1Q9H6X2 564 aa16.92■□□□□ 0.3
DNMT1-207ENST00000586588 ZNF644Q9H582 1327 aaPredicted RBP16.91■□□□□ 0.3
DNMT1-207ENST00000586588 KIAA1107Q9UPP5 1409 aa16.91■□□□□ 0.3
DNMT1-207ENST00000586588 CENPJQ9HC77 1338 aaPredicted RBP16.9■□□□□ 0.3
DNMT1-207ENST00000586588 DNMT1P26358 1616 aaKnown RBP16.9■□□□□ 0.3
DNMT1-207ENST00000586588 GOLGA6L2Q8N9W4 650 aaPredicted RBP16.9■□□□□ 0.3
DNMT1-207ENST00000586588 GPATCH8Q9UKJ3 1502 aaKnown RBP16.89■□□□□ 0.29
DNMT1-207ENST00000586588 CARD11Q9BXL7 1154 aa16.89■□□□□ 0.29
DNMT1-207ENST00000586588 ABCC10Q5T3U5 1492 aa16.88■□□□□ 0.29
DNMT1-207ENST00000586588 RGS3P49796 1198 aa16.88■□□□□ 0.29
DNMT1-207ENST00000586588 ABCC5O15440 1437 aa16.88■□□□□ 0.29
DNMT1-207ENST00000586588 ZNF326Q5BKZ1 582 aaKnown RBP16.88■□□□□ 0.29
DNMT1-207ENST00000586588 ABCC2Q92887 1545 aa16.88■□□□□ 0.29
DNMT1-207ENST00000586588 ARHGEF12Q9NZN5 1544 aa16.88■□□□□ 0.29
DNMT1-207ENST00000586588 CDC42BPAQ5VT25 1732 aa16.87■□□□□ 0.29
DNMT1-207ENST00000586588 ST20-MTHFSA0A0A6YYL1 179 aa16.86■□□□□ 0.29
DNMT1-207ENST00000586588 MRE11P49959 708 aa16.86■□□□□ 0.29
DNMT1-207ENST00000586588 PODXL2Q9NZ53 605 aa16.86■□□□□ 0.29
DNMT1-207ENST00000586588 ITSN2Q9NZM3 1697 aa16.86■□□□□ 0.29
DNMT1-207ENST00000586588 TPM2P07951 284 aa16.85■□□□□ 0.29
DNMT1-207ENST00000586588 PDCL3Q9H2J4 239 aa16.85■□□□□ 0.29
DNMT1-207ENST00000586588 EIF3AQ14152 1382 aaKnown RBP16.85■□□□□ 0.29
DNMT1-207ENST00000586588 PER1O15534 1290 aaPredicted RBP16.85■□□□□ 0.29
DNMT1-207ENST00000586588 SLKQ9H2G2 1235 aaPredicted RBP16.84■□□□□ 0.29
DNMT1-207ENST00000586588 ISY1Q9ULR0 285 aaKnown RBP16.84■□□□□ 0.29
DNMT1-207ENST00000586588 CAMSAP2Q08AD1 1489 aa16.84■□□□□ 0.29
DNMT1-207ENST00000586588 PLEKHD1A6NEE1 506 aa16.83■□□□□ 0.28
DNMT1-207ENST00000586588 DUSP27Q5VZP5 1158 aa16.83■□□□□ 0.28
DNMT1-207ENST00000586588 NLRP1Q9C000 1473 aa16.83■□□□□ 0.28
DNMT1-207ENST00000586588 PANK2Q9BZ23 570 aa16.83■□□□□ 0.28
DNMT1-207ENST00000586588 ESPNB1AK53 854 aa16.82■□□□□ 0.28
DNMT1-207ENST00000586588 MAPK8IP3Q9UPT6 1336 aa16.82■□□□□ 0.28
DNMT1-207ENST00000586588 MCM4P33991 863 aa16.81■□□□□ 0.28
DNMT1-207ENST00000586588 ZCCHC11Q5TAX3 1644 aaKnown RBP16.8■□□□□ 0.28
DNMT1-207ENST00000586588 MYH16Q9H6N6 1097 aa16.79■□□□□ 0.28
DNMT1-207ENST00000586588 TTC37Q6PGP7 1564 aa16.79■□□□□ 0.28
DNMT1-207ENST00000586588 CALD1Q05682 793 aaKnown RBP16.79■□□□□ 0.28
DNMT1-207ENST00000586588 CFDP1Q9UEE9 299 aaPredicted RBP16.79■□□□□ 0.28
DNMT1-207ENST00000586588 ZMYM3Q14202 1370 aa16.78■□□□□ 0.28
DNMT1-207ENST00000586588 ZNF521Q96K83 1311 aa16.78■□□□□ 0.28
DNMT1-207ENST00000586588 SEC24BO95487 1268 aa16.78■□□□□ 0.28
DNMT1-207ENST00000586588 UHRF1BP1LA0JNW5 1464 aa16.77■□□□□ 0.28
DNMT1-207ENST00000586588 CDC42BPBQ9Y5S2 1711 aa16.76■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 18.9 ms