RNA–Protein interactions for RNA: ENST00000586545.5

PIK3C3-204, Transcript of phosphatidylinositol 3-kinase catalytic subunit type 3, humanhuman

TSL 1 (best) BASIC

Gene PIK3C3, Length 1,554 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PIK3C3-204ENST00000586545 PTPRKQ15262 1439 aa13.6□□□□□ -0.23
PIK3C3-204ENST00000586545 CFDP1Q9UEE9 299 aaPredicted RBP13.59□□□□□ -0.23
PIK3C3-204ENST00000586545 MTUS2Q5JR59 1369 aa13.59□□□□□ -0.23
PIK3C3-204ENST00000586545 SPATA31D1Q6ZQQ2 1576 aa13.59□□□□□ -0.23
PIK3C3-204ENST00000586545 PLA2R1Q13018 1463 aa13.58□□□□□ -0.24
PIK3C3-204ENST00000586545 POLR1AO95602 1720 aaPredicted RBP13.58□□□□□ -0.24
PIK3C3-204ENST00000586545 TCOF1Q13428 1488 aaKnown RBP13.58□□□□□ -0.24
PIK3C3-204ENST00000586545 DNMT1P26358 1616 aaKnown RBP13.57□□□□□ -0.24
PIK3C3-204ENST00000586545 ZNF644Q9H582 1327 aaPredicted RBP13.56□□□□□ -0.24
PIK3C3-204ENST00000586545 CEP162Q5TB80 1403 aa13.56□□□□□ -0.24
PIK3C3-204ENST00000586545 CAPN15O75808 1086 aa13.55□□□□□ -0.24
PIK3C3-204ENST00000586545 ILDR2Q71H61 639 aa13.55□□□□□ -0.24
PIK3C3-204ENST00000586545 DISP3Q9P2K9 1392 aa13.55□□□□□ -0.24
PIK3C3-204ENST00000586545 NCKAP5LQ9HCH0 1330 aa13.55□□□□□ -0.24
PIK3C3-204ENST00000586545 RTEL1-TNFRSF6BF6WH68 1400 aa13.54□□□□□ -0.24
PIK3C3-204ENST00000586545 GGT6Q6P531 493 aa13.53□□□□□ -0.24
PIK3C3-204ENST00000586545 A2ML1A8K2U0 1454 aa13.53□□□□□ -0.24
PIK3C3-204ENST00000586545 NEURL4Q96JN8 1562 aa13.53□□□□□ -0.24
PIK3C3-204ENST00000586545 ZNF335Q9H4Z2 1342 aaPredicted RBP13.52□□□□□ -0.24
PIK3C3-204ENST00000586545 CAMSAP2Q08AD1 1489 aa13.52□□□□□ -0.25
PIK3C3-204ENST00000586545 FAM135AQ9P2D6 1515 aa13.52□□□□□ -0.25
PIK3C3-204ENST00000586545 CCDC141Q6ZP82 1450 aa13.51□□□□□ -0.25
PIK3C3-204ENST00000586545 NCOA2Q15596 1464 aa13.51□□□□□ -0.25
PIK3C3-204ENST00000586545 DHX29Q7Z478 1369 aaKnown RBP13.5□□□□□ -0.25
PIK3C3-204ENST00000586545 KDM5DQ9BY66 1539 aa13.5□□□□□ -0.25
PIK3C3-204ENST00000586545 ARHGEF5Q12774 1597 aa13.5□□□□□ -0.25
PIK3C3-204ENST00000586545 PKD2Q13563 968 aa13.49□□□□□ -0.25
PIK3C3-204ENST00000586545 PZPP20742 1482 aa13.48□□□□□ -0.25
PIK3C3-204ENST00000586545 RNF17Q9BXT8 1623 aaKnown RBP13.47□□□□□ -0.25
PIK3C3-204ENST00000586545 MAST1Q9Y2H9 1570 aa13.45□□□□□ -0.26
PIK3C3-204ENST00000586545 ZC3H13Q5T200 1668 aaKnown RBP13.45□□□□□ -0.26
PIK3C3-204ENST00000586545 TNRQ92752 1358 aa13.45□□□□□ -0.26
PIK3C3-204ENST00000586545 SOCS7O14512 581 aa13.45□□□□□ -0.26
PIK3C3-204ENST00000586545 FBXO31Q5XUX0 539 aaPredicted RBP13.45□□□□□ -0.26
PIK3C3-204ENST00000586545 VWDEQ8N2E2 1590 aa13.44□□□□□ -0.26
PIK3C3-204ENST00000586545 DEPDC5O75140 1603 aa13.44□□□□□ -0.26
PIK3C3-204ENST00000586545 CEP152O94986 1710 aa13.44□□□□□ -0.26
PIK3C3-204ENST00000586545 SPINK5Q9NQ38 1064 aaPredicted RBP13.44□□□□□ -0.26
PIK3C3-204ENST00000586545 MROH1Q8NDA8 1641 aa13.43□□□□□ -0.26
PIK3C3-204ENST00000586545 EIF2AK4Q9P2K8 1649 aaKnown RBP13.43□□□□□ -0.26
PIK3C3-204ENST00000586545 STRCP1A6NGW2 1772 aa13.43□□□□□ -0.26
PIK3C3-204ENST00000586545 CFAP65Q6ZU64 1925 aaKnown RBP13.43□□□□□ -0.26
PIK3C3-204ENST00000586545 UBAP1LF5GYI3 381 aa13.43□□□□□ -0.26
PIK3C3-204ENST00000586545 KIF3BO15066 747 aa13.43□□□□□ -0.26
PIK3C3-204ENST00000586545 CPS1P31327 1500 aa13.42□□□□□ -0.26
PIK3C3-204ENST00000586545 IQGAP1P46940 1657 aa13.41□□□□□ -0.26
PIK3C3-204ENST00000586545 ABCC3O15438 1527 aa13.41□□□□□ -0.26
PIK3C3-204ENST00000586545 ALKQ9UM73 1620 aa13.41□□□□□ -0.26
PIK3C3-204ENST00000586545 LRRC9Q6ZRR7 1453 aa13.41□□□□□ -0.26
PIK3C3-204ENST00000586545 NLRP1Q9C000 1473 aa13.41□□□□□ -0.26
PIK3C3-204ENST00000586545 SHANK2Q9UPX8 1470 aa13.41□□□□□ -0.26
PIK3C3-204ENST00000586545 CHRDL2Q6WN34 429 aa13.41□□□□□ -0.26
PIK3C3-204ENST00000586545 UGGT1Q9NYU2 1555 aa13.4□□□□□ -0.26
PIK3C3-204ENST00000586545 MED14O60244 1454 aa13.4□□□□□ -0.26
PIK3C3-204ENST00000586545 RSPH4AQ5TD94 716 aa13.4□□□□□ -0.26
PIK3C3-204ENST00000586545 MIA2Q96PC5 1412 aa13.39□□□□□ -0.27
PIK3C3-204ENST00000586545 UBR1Q8IWV7 1749 aa13.39□□□□□ -0.27
PIK3C3-204ENST00000586545 VPS8Q8N3P4 1428 aa13.39□□□□□ -0.27
PIK3C3-204ENST00000586545 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP13.38□□□□□ -0.27
PIK3C3-204ENST00000586545 CROCC2H7BZ55 1655 aa13.38□□□□□ -0.27
PIK3C3-204ENST00000586545 WASHC2CQ9Y4E1 1318 aa13.38□□□□□ -0.27
PIK3C3-204ENST00000586545 MED1Q15648 1581 aaPredicted RBP13.37□□□□□ -0.27
PIK3C3-204ENST00000586545 ERVK-7P63135 1459 aa13.37□□□□□ -0.27
PIK3C3-204ENST00000586545 NPHP4O75161 1426 aaPredicted RBP13.36□□□□□ -0.27
PIK3C3-204ENST00000586545 MAP3K1Q13233 1512 aa13.36□□□□□ -0.27
PIK3C3-204ENST00000586545 XIRP1Q702N8 1843 aaKnown RBP13.35□□□□□ -0.27
PIK3C3-204ENST00000586545 SYNMO15061 1565 aa13.34□□□□□ -0.27
PIK3C3-204ENST00000586545 TSPY4P0CV99 314 aa13.33□□□□□ -0.28
PIK3C3-204ENST00000586545 TSPY10P0CW01 314 aa13.33□□□□□ -0.28
PIK3C3-204ENST00000586545 ANKLE2Q86XL3 938 aa13.33□□□□□ -0.28
PIK3C3-204ENST00000586545 MYOM3Q5VTT5 1437 aa13.33□□□□□ -0.28
PIK3C3-204ENST00000586545 PRDM15P57071 1507 aaPredicted RBP13.33□□□□□ -0.28
PIK3C3-204ENST00000586545 DUOX2Q9NRD8 1548 aa13.33□□□□□ -0.28
PIK3C3-204ENST00000586545 HSPA1LP34931 641 aa13.32□□□□□ -0.28
PIK3C3-204ENST00000586545 THEMISQ8N1K5 641 aaPredicted RBP13.32□□□□□ -0.28
PIK3C3-204ENST00000586545 KANK4Q5T7N3 995 aaPredicted RBP13.32□□□□□ -0.28
PIK3C3-204ENST00000586545 LRRC7Q96NW7 1537 aa13.31□□□□□ -0.28
PIK3C3-204ENST00000586545 PIP4K2BP78356 416 aa13.3□□□□□ -0.28
PIK3C3-204ENST00000586545 PTPN23Q9H3S7 1636 aa13.3□□□□□ -0.28
PIK3C3-204ENST00000586545 TOM1O60784 492 aa13.29□□□□□ -0.28
PIK3C3-204ENST00000586545 ARHGAP23Q9P227 1491 aa13.29□□□□□ -0.28
PIK3C3-204ENST00000586545 PIK3C2BO00750 1634 aa13.29□□□□□ -0.28
PIK3C3-204ENST00000586545 SLIT1O75093 1534 aa13.29□□□□□ -0.28
PIK3C3-204ENST00000586545 LOC105371045A0A1W2PR82 267 aa13.28□□□□□ -0.28
PIK3C3-204ENST00000586545 U3KPZ7 1027 aaPredicted RBP13.28□□□□□ -0.28
PIK3C3-204ENST00000586545 KDM5AP29375 1690 aaKnown RBP13.27□□□□□ -0.28
PIK3C3-204ENST00000586545 ARHGAP31Q2M1Z3 1444 aa13.27□□□□□ -0.29
PIK3C3-204ENST00000586545 RBM42Q9BTD8 480 aaKnown RBP13.27□□□□□ -0.29
PIK3C3-204ENST00000586545 SCAF11Q99590 1463 aaKnown RBP13.27□□□□□ -0.29
PIK3C3-204ENST00000586545 ABCC5O15440 1437 aa13.26□□□□□ -0.29
PIK3C3-204ENST00000586545 ERBINQ96RT1 1412 aa13.25□□□□□ -0.29
PIK3C3-204ENST00000586545 KIF15Q9NS87 1388 aa13.25□□□□□ -0.29
PIK3C3-204ENST00000586545 DAPK1P53355 1430 aa13.23□□□□□ -0.29
PIK3C3-204ENST00000586545 MYO5BQ9ULV0 1848 aa13.22□□□□□ -0.29
PIK3C3-204ENST00000586545 LTKP29376 864 aa13.22□□□□□ -0.29
PIK3C3-204ENST00000586545 LMTK2Q8IWU2 1503 aa13.22□□□□□ -0.29
PIK3C3-204ENST00000586545 FGD6Q6ZV73 1430 aa13.2□□□□□ -0.3
PIK3C3-204ENST00000586545 EFCAB6Q5THR3 1501 aa13.19□□□□□ -0.3
PIK3C3-204ENST00000586545 RRP7BPQ9NSQ0 103 aa13.19□□□□□ -0.3
PIK3C3-204ENST00000586545 TET3O43151 1660 aa13.19□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 40.2 ms