RNA–Protein interactions for RNA: ENST00000586545.5

PIK3C3-204, Transcript of phosphatidylinositol 3-kinase catalytic subunit type 3, humanhuman

TSL 1 (best) BASIC

Gene PIK3C3, Length 1,554 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PIK3C3-204ENST00000586545 AEBP2Q6ZN18 517 aaPredicted RBP22.84■■□□□ 1.25
PIK3C3-204ENST00000586545 CHIC1Q5VXU3 224 aa21.5■■□□□ 1.03
PIK3C3-204ENST00000586545 NISCHQ9Y2I1 1504 aa21.36■■□□□ 1.01
PIK3C3-204ENST00000586545 SENP3Q9H4L4 574 aaPredicted RBP19.85■□□□□ 0.77
PIK3C3-204ENST00000586545 POTEDQ86YR6 584 aa19.63■□□□□ 0.73
PIK3C3-204ENST00000586545 PHF23Q9BUL5 403 aaPredicted RBP19.34■□□□□ 0.69
PIK3C3-204ENST00000586545 ABCC9O60706 1549 aa19.3■□□□□ 0.68
PIK3C3-204ENST00000586545 CCDC180Q9P1Z9 1646 aa19.3■□□□□ 0.68
PIK3C3-204ENST00000586545 FOXD1Q16676 465 aa18.56■□□□□ 0.56
PIK3C3-204ENST00000586545 RB1CC1Q8TDY2 1594 aa18.35■□□□□ 0.53
PIK3C3-204ENST00000586545 DNAJC5BQ9UF47 199 aa18.21■□□□□ 0.51
PIK3C3-204ENST00000586545 NACADO15069 1562 aa18.2■□□□□ 0.5
PIK3C3-204ENST00000586545 UNC13AQ9UPW8 1703 aa18.1■□□□□ 0.49
PIK3C3-204ENST00000586545 MSH5O43196 834 aa17.99■□□□□ 0.47
PIK3C3-204ENST00000586545 MYO15BQ96JP2 1530 aa17.92■□□□□ 0.46
PIK3C3-204ENST00000586545 DCAF8L2P0C7V8 631 aa17.91■□□□□ 0.46
PIK3C3-204ENST00000586545 PABPN1Q86U42 306 aaKnown RBP eCLIP17.9■□□□□ 0.46
PIK3C3-204ENST00000586545 BICRAQ9NZM4 1560 aa17.88■□□□□ 0.45
PIK3C3-204ENST00000586545 ZCCHC6Q5VYS8 1495 aaKnown RBP17.7■□□□□ 0.42
PIK3C3-204ENST00000586545 DCAF1Q9Y4B6 1507 aa17.65■□□□□ 0.42
PIK3C3-204ENST00000586545 SHROOM4Q9ULL8 1493 aa17.56■□□□□ 0.4
PIK3C3-204ENST00000586545 SCRIBQ14160 1630 aa17.53■□□□□ 0.4
PIK3C3-204ENST00000586545 CC2D2AQ9P2K1 1620 aa17.49■□□□□ 0.39
PIK3C3-204ENST00000586545 EIF4G1Q04637 1599 aaKnown RBP17.41■□□□□ 0.38
PIK3C3-204ENST00000586545 CECR2Q9BXF3 1484 aa17.39■□□□□ 0.37
PIK3C3-204ENST00000586545 PIAS4Q8N2W9 510 aaPredicted RBP17.07■□□□□ 0.32
PIK3C3-204ENST00000586545 NCAPD3P42695 1498 aa16.77■□□□□ 0.28
PIK3C3-204ENST00000586545 DNAJC5Q9H3Z4 198 aa16.76■□□□□ 0.27
PIK3C3-204ENST00000586545 SMARCA4P51532 1647 aa16.73■□□□□ 0.27
PIK3C3-204ENST00000586545 ATAD2BQ9ULI0 1458 aa16.72■□□□□ 0.27
PIK3C3-204ENST00000586545 CUX2O14529 1486 aa16.69■□□□□ 0.26
PIK3C3-204ENST00000586545 HMGXB3Q12766 1538 aa16.68■□□□□ 0.26
PIK3C3-204ENST00000586545 SMARCA2P51531 1590 aa16.67■□□□□ 0.26
PIK3C3-204ENST00000586545 ERCC6Q03468 1493 aa16.63■□□□□ 0.25
PIK3C3-204ENST00000586545 BAZ1AQ9NRL2 1556 aaPredicted RBP16.58■□□□□ 0.24
PIK3C3-204ENST00000586545 NESP48681 1621 aa16.58■□□□□ 0.24
PIK3C3-204ENST00000586545 PEG3Q9GZU2 1588 aa16.57■□□□□ 0.24
PIK3C3-204ENST00000586545 BAZ1BQ9UIG0 1483 aaKnown RBP16.54■□□□□ 0.24
PIK3C3-204ENST00000586545 THOC2Q8NI27 1593 aaKnown RBP16.5■□□□□ 0.23
PIK3C3-204ENST00000586545 MROH2BQ7Z745 1585 aa16.47■□□□□ 0.23
PIK3C3-204ENST00000586545 LAMC3Q9Y6N6 1575 aa16.45■□□□□ 0.22
PIK3C3-204ENST00000586545 KIF21AQ7Z4S6 1674 aa16.45■□□□□ 0.22
PIK3C3-204ENST00000586545 WIZO95785 1651 aa16.3■□□□□ 0.2
PIK3C3-204ENST00000586545 PPP6R1Q9UPN7 881 aa16.3■□□□□ 0.2
PIK3C3-204ENST00000586545 PDS5BQ9NTI5 1447 aa16.28■□□□□ 0.2
PIK3C3-204ENST00000586545 CADPSQ9ULU8 1353 aa16.23■□□□□ 0.19
PIK3C3-204ENST00000586545 WDR62O43379 1518 aa16.2■□□□□ 0.18
PIK3C3-204ENST00000586545 MRC2Q9UBG0 1479 aa16.2■□□□□ 0.18
PIK3C3-204ENST00000586545 ADRA2BP18089 450 aa16.2■□□□□ 0.18
PIK3C3-204ENST00000586545 CACNB1Q02641 598 aaPredicted RBP16.18■□□□□ 0.18
PIK3C3-204ENST00000586545 CEP164Q9UPV0 1460 aa16.09■□□□□ 0.17
PIK3C3-204ENST00000586545 FANCD2Q9BXW9 1451 aa16.07■□□□□ 0.16
PIK3C3-204ENST00000586545 TOP2AP11388 1531 aaKnown RBP16.05■□□□□ 0.16
PIK3C3-204ENST00000586545 CFTRP13569 1480 aa16.05■□□□□ 0.16
PIK3C3-204ENST00000586545 RSF1Q96T23 1441 aaPredicted RBP16.04■□□□□ 0.16
PIK3C3-204ENST00000586545 PRDM2Q13029 1718 aa16.04■□□□□ 0.16
PIK3C3-204ENST00000586545 URB2Q14146 1524 aaKnown RBP15.99■□□□□ 0.15
PIK3C3-204ENST00000586545 TRIM41Q8WV44 630 aa15.93■□□□□ 0.14
PIK3C3-204ENST00000586545 PLPPR3Q6T4P5 718 aa15.89■□□□□ 0.13
PIK3C3-204ENST00000586545 CCDC88BA6NC98 1476 aa15.84■□□□□ 0.13
PIK3C3-204ENST00000586545 OSCARQ8IYS5 282 aa15.82■□□□□ 0.12
PIK3C3-204ENST00000586545 ZNF608Q9ULD9 1512 aaPredicted RBP15.8■□□□□ 0.12
PIK3C3-204ENST00000586545 TOPBP1Q92547 1522 aa15.78■□□□□ 0.12
PIK3C3-204ENST00000586545 IFT140Q96RY7 1462 aa15.77■□□□□ 0.12
PIK3C3-204ENST00000586545 RIMBP3CA6NJZ7 1639 aa15.77■□□□□ 0.12
PIK3C3-204ENST00000586545 RIMBP3BA6NNM3 1639 aa15.77■□□□□ 0.12
PIK3C3-204ENST00000586545 RIMBP3Q9UFD9 1639 aa15.77■□□□□ 0.12
PIK3C3-204ENST00000586545 EIF4G3O43432 1585 aaKnown RBP15.75■□□□□ 0.11
PIK3C3-204ENST00000586545 DNMBPQ6XZF7 1577 aa15.73■□□□□ 0.11
PIK3C3-204ENST00000586545 TARBP1Q13395 1621 aaKnown RBP15.7■□□□□ 0.1
PIK3C3-204ENST00000586545 CHD1O14646 1710 aa15.7■□□□□ 0.1
PIK3C3-204ENST00000586545 ABCC8Q09428 1581 aa15.69■□□□□ 0.1
PIK3C3-204ENST00000586545 ARHGEF11O15085 1522 aa15.67■□□□□ 0.1
PIK3C3-204ENST00000586545 AQRO60306 1485 aaKnown RBP eCLIP15.6■□□□□ 0.09
PIK3C3-204ENST00000586545 POLA1P09884 1462 aaPredicted RBP15.6■□□□□ 0.09
PIK3C3-204ENST00000586545 RAD54L2Q9Y4B4 1467 aa15.54■□□□□ 0.08
PIK3C3-204ENST00000586545 ARAP1Q96P48 1450 aa15.51■□□□□ 0.07
PIK3C3-204ENST00000586545 WDR97A6NE52 1622 aa15.51■□□□□ 0.07
PIK3C3-204ENST00000586545 DMRT2Q9Y5R5 561 aa15.51■□□□□ 0.07
PIK3C3-204ENST00000586545 FGD5Q6ZNL6 1462 aa15.49■□□□□ 0.07
PIK3C3-204ENST00000586545 CUX1P39880 1505 aa15.49■□□□□ 0.07
PIK3C3-204ENST00000586545 SOGA1O94964 1423 aa15.48■□□□□ 0.07
PIK3C3-204ENST00000586545 CLASP1Q7Z460 1538 aa15.47■□□□□ 0.07
PIK3C3-204ENST00000586545 SNAPC4Q5SXM2 1469 aa15.46■□□□□ 0.07
PIK3C3-204ENST00000586545 TDRD9Q8NDG6 1382 aaKnown RBP15.46■□□□□ 0.06
PIK3C3-204ENST00000586545 CYB5RLQ6IPT4 315 aa15.45■□□□□ 0.06
PIK3C3-204ENST00000586545 PBRM1Q86U86 1689 aa15.44■□□□□ 0.06
PIK3C3-204ENST00000586545 FBLN2P98095 1184 aa15.42■□□□□ 0.06
PIK3C3-204ENST00000586545 MAGI1Q96QZ7 1491 aaPredicted RBP15.41■□□□□ 0.06
PIK3C3-204ENST00000586545 SYNJ1O43426 1573 aa15.4■□□□□ 0.06
PIK3C3-204ENST00000586545 GRIN2BQ13224 1484 aa15.38■□□□□ 0.05
PIK3C3-204ENST00000586545 ABCA5Q8WWZ7 1642 aa15.36■□□□□ 0.05
PIK3C3-204ENST00000586545 SYNJ2O15056 1496 aa15.35■□□□□ 0.05
PIK3C3-204ENST00000586545 GAPVD1Q14C86 1478 aa15.32■□□□□ 0.04
PIK3C3-204ENST00000586545 ABCA10Q8WWZ4 1543 aa15.31■□□□□ 0.04
PIK3C3-204ENST00000586545 CHMP7Q8WUX9 453 aaPredicted RBP15.31■□□□□ 0.04
PIK3C3-204ENST00000586545 TRHP20396 242 aaPredicted RBP15.29■□□□□ 0.04
PIK3C3-204ENST00000586545 BIVM-ERCC5R4GMW8 1640 aa15.26■□□□□ 0.03
PIK3C3-204ENST00000586545 MAPK8IP2Q13387 824 aaPredicted RBP15.24■□□□□ 0.03
PIK3C3-204ENST00000586545 ADAMTS12P58397 1594 aa15.24■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 13.5 ms