RNA–Protein interactions for RNA: ENST00000585540.1

PRKCSH-202, Transcript of protein kinase C substrate 80K-H, humanhuman

TSL 3

Gene PRKCSH, Length 501 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKCSH-202ENST00000585540 ROCK1Q13464 1354 aa21.13■□□□□ 0.97
PRKCSH-202ENST00000585540 KIF3BO15066 747 aa21.12■□□□□ 0.97
PRKCSH-202ENST00000585540 SETD1BQ9UPS6 1966 aaKnown RBP21.12■□□□□ 0.97
PRKCSH-202ENST00000585540 NPATQ14207 1427 aa21.12■□□□□ 0.97
PRKCSH-202ENST00000585540 C3P01024 1663 aa21.12■□□□□ 0.97
PRKCSH-202ENST00000585540 GGT6Q6P531 493 aa21.1■□□□□ 0.97
PRKCSH-202ENST00000585540 CLTCQ00610 1675 aaKnown RBP21.09■□□□□ 0.97
PRKCSH-202ENST00000585540 PRDM15P57071 1507 aaPredicted RBP21.09■□□□□ 0.97
PRKCSH-202ENST00000585540 PREX1Q8TCU6 1659 aa21.08■□□□□ 0.96
PRKCSH-202ENST00000585540 DEPDC5O75140 1603 aa21.07■□□□□ 0.96
PRKCSH-202ENST00000585540 ZMYM3Q14202 1370 aa21.07■□□□□ 0.96
PRKCSH-202ENST00000585540 MROH1Q8NDA8 1641 aa21.04■□□□□ 0.96
PRKCSH-202ENST00000585540 RRP7BPQ9NSQ0 103 aa21.04■□□□□ 0.96
PRKCSH-202ENST00000585540 UHRF1BP1Q6BDS2 1440 aa21.04■□□□□ 0.96
PRKCSH-202ENST00000585540 ANKRD50Q9ULJ7 1429 aa21.03■□□□□ 0.96
PRKCSH-202ENST00000585540 PZPP20742 1482 aa21.02■□□□□ 0.96
PRKCSH-202ENST00000585540 LMTK3Q96Q04 1460 aa21.02■□□□□ 0.96
PRKCSH-202ENST00000585540 KANK1Q14678 1352 aa21.02■□□□□ 0.96
PRKCSH-202ENST00000585540 CHIC2Q9UKJ5 165 aa21.02■□□□□ 0.96
PRKCSH-202ENST00000585540 ABCC3O15438 1527 aa21.02■□□□□ 0.96
PRKCSH-202ENST00000585540 WASHC2CQ9Y4E1 1318 aa21.02■□□□□ 0.95
PRKCSH-202ENST00000585540 PTPRKQ15262 1439 aa21.01■□□□□ 0.95
PRKCSH-202ENST00000585540 LMTK2Q8IWU2 1503 aa20.99■□□□□ 0.95
PRKCSH-202ENST00000585540 VWDEQ8N2E2 1590 aa20.97■□□□□ 0.95
PRKCSH-202ENST00000585540 ARHGAP31Q2M1Z3 1444 aa20.96■□□□□ 0.95
PRKCSH-202ENST00000585540 CEBPAP49715 358 aaPredicted RBP20.96■□□□□ 0.95
PRKCSH-202ENST00000585540 CAMSAP1Q5T5Y3 1602 aa20.96■□□□□ 0.95
PRKCSH-202ENST00000585540 UNC13BO14795 1591 aa20.95■□□□□ 0.94
PRKCSH-202ENST00000585540 ZNF142P52746 1687 aaPredicted RBP20.95■□□□□ 0.94
PRKCSH-202ENST00000585540 CEP152O94986 1710 aa20.94■□□□□ 0.94
PRKCSH-202ENST00000585540 MYO3AQ8NEV4 1616 aa20.93■□□□□ 0.94
PRKCSH-202ENST00000585540 PLPPR3Q6T4P5 718 aa20.92■□□□□ 0.94
PRKCSH-202ENST00000585540 SPATA31D1Q6ZQQ2 1576 aa20.92■□□□□ 0.94
PRKCSH-202ENST00000585540 GCC2Q8IWJ2 1684 aa20.92■□□□□ 0.94
PRKCSH-202ENST00000585540 RPRD2Q5VT52 1461 aaKnown RBP20.89■□□□□ 0.94
PRKCSH-202ENST00000585540 NLRP1Q9C000 1473 aa20.89■□□□□ 0.94
PRKCSH-202ENST00000585540 HFM1A2PYH4 1435 aa20.88■□□□□ 0.93
PRKCSH-202ENST00000585540 TNRQ92752 1358 aa20.88■□□□□ 0.93
PRKCSH-202ENST00000585540 ITGAEP38570 1179 aa20.88■□□□□ 0.93
PRKCSH-202ENST00000585540 CEP170BQ9Y4F5 1589 aaPredicted RBP20.88■□□□□ 0.93
PRKCSH-202ENST00000585540 EFCAB6Q5THR3 1501 aa20.88■□□□□ 0.93
PRKCSH-202ENST00000585540 ERVK-7P63135 1459 aa20.88■□□□□ 0.93
PRKCSH-202ENST00000585540 ACIN1Q9UKV3 1341 aaKnown RBP20.87■□□□□ 0.93
PRKCSH-202ENST00000585540 TET3O43151 1660 aa20.86■□□□□ 0.93
PRKCSH-202ENST00000585540 A2ML1A8K2U0 1454 aa20.86■□□□□ 0.93
PRKCSH-202ENST00000585540 IQGAP3Q86VI3 1631 aa20.86■□□□□ 0.93
PRKCSH-202ENST00000585540 NAIPQ13075 1403 aa20.85■□□□□ 0.93
PRKCSH-202ENST00000585540 PLA2R1Q13018 1463 aa20.84■□□□□ 0.93
PRKCSH-202ENST00000585540 GRWD1Q9BQ67 446 aaKnown RBP eCLIP20.83■□□□□ 0.931e-7■■□□□ 12.6
PRKCSH-202ENST00000585540 ILDR1Q86SU0 546 aaPredicted RBP20.79■□□□□ 0.92
PRKCSH-202ENST00000585540 DMRT2Q9Y5R5 561 aa20.79■□□□□ 0.92
PRKCSH-202ENST00000585540 NOS1P29475 1434 aa20.78■□□□□ 0.92
PRKCSH-202ENST00000585540 KDM5AP29375 1690 aaKnown RBP20.77■□□□□ 0.92
PRKCSH-202ENST00000585540 FBXO31Q5XUX0 539 aaPredicted RBP20.77■□□□□ 0.92
PRKCSH-202ENST00000585540 UGGT1Q9NYU2 1555 aa20.76■□□□□ 0.91
PRKCSH-202ENST00000585540 NUP155O75694 1391 aa20.76■□□□□ 0.91
PRKCSH-202ENST00000585540 HSPA2P54652 639 aa20.76■□□□□ 0.91
PRKCSH-202ENST00000585540 PTPRTO14522 1441 aa20.74■□□□□ 0.91
PRKCSH-202ENST00000585540 PKD2Q13563 968 aa20.74■□□□□ 0.91
PRKCSH-202ENST00000585540 THEMISQ8N1K5 641 aaPredicted RBP20.73■□□□□ 0.91
PRKCSH-202ENST00000585540 STRCQ7RTU9 1775 aa20.72■□□□□ 0.91
PRKCSH-202ENST00000585540 SLC52A1Q9NWF4 448 aa20.71■□□□□ 0.91
PRKCSH-202ENST00000585540 E9PCH4 1651 aa20.7■□□□□ 0.91
PRKCSH-202ENST00000585540 SYNMO15061 1565 aa20.69■□□□□ 0.9
PRKCSH-202ENST00000585540 CFAP65Q6ZU64 1925 aaKnown RBP20.69■□□□□ 0.9
PRKCSH-202ENST00000585540 POLR1AO95602 1720 aaPredicted RBP20.69■□□□□ 0.9
PRKCSH-202ENST00000585540 UBR1Q8IWV7 1749 aa20.69■□□□□ 0.9
PRKCSH-202ENST00000585540 PIK3C2BO00750 1634 aa20.66■□□□□ 0.9
PRKCSH-202ENST00000585540 ADGRB3O60242 1522 aa20.65■□□□□ 0.9
PRKCSH-202ENST00000585540 SLIT1O75093 1534 aa20.65■□□□□ 0.9
PRKCSH-202ENST00000585540 SETD5Q9C0A6 1442 aa20.65■□□□□ 0.9
PRKCSH-202ENST00000585540 ARHGAP23Q9P227 1491 aa20.63■□□□□ 0.89
PRKCSH-202ENST00000585540 SPHKAPQ2M3C7 1700 aa20.63■□□□□ 0.89
PRKCSH-202ENST00000585540 MED14O60244 1454 aa20.62■□□□□ 0.89
PRKCSH-202ENST00000585540 ANKLE2Q86XL3 938 aa20.62■□□□□ 0.89
PRKCSH-202ENST00000585540 HRCP23327 699 aa20.6■□□□□ 0.89
PRKCSH-202ENST00000585540 STAG3Q9UJ98 1225 aa20.6■□□□□ 0.89
PRKCSH-202ENST00000585540 TRPM2O94759 1503 aa20.59■□□□□ 0.89
PRKCSH-202ENST00000585540 IDI1Q13907 227 aa20.59■□□□□ 0.89
PRKCSH-202ENST00000585540 TRIM52Q96A61 297 aa20.59■□□□□ 0.89
PRKCSH-202ENST00000585540 NEURL4Q96JN8 1562 aa20.59■□□□□ 0.89
PRKCSH-202ENST00000585540 SCAF11Q99590 1463 aaKnown RBP20.58■□□□□ 0.89
PRKCSH-202ENST00000585540 TMEM2Q9UHN6 1383 aa20.58■□□□□ 0.88
PRKCSH-202ENST00000585540 SLC4A1APQ9BWU0 796 aaKnown RBP20.56■□□□□ 0.88
PRKCSH-202ENST00000585540 NPHP4O75161 1426 aaPredicted RBP20.55■□□□□ 0.88
PRKCSH-202ENST00000585540 HDGFP51858 240 aaKnown RBP20.55■□□□□ 0.88
PRKCSH-202ENST00000585540 EID1Q9Y6B2 187 aa20.55■□□□□ 0.88
PRKCSH-202ENST00000585540 TMEM131LA2VDJ0 1609 aa20.55■□□□□ 0.88
PRKCSH-202ENST00000585540 NCKAP5LQ9HCH0 1330 aa20.54■□□□□ 0.88
PRKCSH-202ENST00000585540 IQGAP1P46940 1657 aa20.54■□□□□ 0.88
PRKCSH-202ENST00000585540 RAB3GAP2Q9H2M9 1393 aa20.53■□□□□ 0.88
PRKCSH-202ENST00000585540 IQSEC2Q5JU85 1478 aa20.5■□□□□ 0.87
PRKCSH-202ENST00000585540 ABCF1Q8NE71 845 aaKnown RBP eCLIP20.49■□□□□ 0.87
PRKCSH-202ENST00000585540 ZFYVE9O95405 1425 aa20.48■□□□□ 0.87
PRKCSH-202ENST00000585540 TXNDC2Q86VQ3 553 aa20.48■□□□□ 0.87
PRKCSH-202ENST00000585540 KIF1BO60333 1816 aa20.48■□□□□ 0.87
PRKCSH-202ENST00000585540 CLTCL1P53675 1640 aa20.47■□□□□ 0.87
PRKCSH-202ENST00000585540 MPHOSPH9Q99550 1183 aa20.47■□□□□ 0.87
PRKCSH-202ENST00000585540 MYO5BQ9ULV0 1848 aa20.46■□□□□ 0.87
PRKCSH-202ENST00000585540 CPS1P31327 1500 aa20.45■□□□□ 0.86
Retrieved 100 of 20,778 RNA–protein pairs in 37.1 ms