RNA–Protein interactions for RNA: ENST00000585388.1

LSM12-202, Transcript of LSM12 homolog, humanhuman

TSL 3 BASIC

Gene LSM12, Length 942 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM12-202ENST00000585388 TSPY4P0CV99 314 aa25.92■■□□□ 1.74
LSM12-202ENST00000585388 TSPY10P0CW01 314 aa25.92■■□□□ 1.74
LSM12-202ENST00000585388 A2ML1A8K2U0 1454 aa25.91■■□□□ 1.74
LSM12-202ENST00000585388 PZPP20742 1482 aa25.91■■□□□ 1.74
LSM12-202ENST00000585388 IQSEC2Q5JU85 1478 aa25.91■■□□□ 1.74
LSM12-202ENST00000585388 TCOF1Q13428 1488 aaKnown RBP25.9■■□□□ 1.74
LSM12-202ENST00000585388 MYOM3Q5VTT5 1437 aa25.89■■□□□ 1.74
LSM12-202ENST00000585388 MIA2Q96PC5 1412 aa25.89■■□□□ 1.74
LSM12-202ENST00000585388 PKD2Q13563 968 aa25.88■■□□□ 1.73
LSM12-202ENST00000585388 DNMT1P26358 1616 aaKnown RBP25.88■■□□□ 1.73
LSM12-202ENST00000585388 RNF17Q9BXT8 1623 aaKnown RBP25.88■■□□□ 1.73
LSM12-202ENST00000585388 EIF2AK4Q9P2K8 1649 aaKnown RBP25.87■■□□□ 1.73
LSM12-202ENST00000585388 ZC3H13Q5T200 1668 aaKnown RBP25.86■■□□□ 1.73
LSM12-202ENST00000585388 NCKAP5LQ9HCH0 1330 aa25.86■■□□□ 1.73
LSM12-202ENST00000585388 TNRQ92752 1358 aa25.85■■□□□ 1.73
LSM12-202ENST00000585388 WASHC2CQ9Y4E1 1318 aa25.85■■□□□ 1.73
LSM12-202ENST00000585388 KANK4Q5T7N3 995 aaPredicted RBP25.84■■□□□ 1.73
LSM12-202ENST00000585388 POLR1AO95602 1720 aaPredicted RBP25.83■■□□□ 1.72
LSM12-202ENST00000585388 CROCC2H7BZ55 1655 aa25.78■■□□□ 1.72
LSM12-202ENST00000585388 FBXO31Q5XUX0 539 aaPredicted RBP25.78■■□□□ 1.72
LSM12-202ENST00000585388 NLRP1Q9C000 1473 aa25.78■■□□□ 1.72
LSM12-202ENST00000585388 ABCC3O15438 1527 aa25.77■■□□□ 1.72
LSM12-202ENST00000585388 APLP2Q06481 763 aa25.76■■□□□ 1.71
LSM12-202ENST00000585388 ZNF335Q9H4Z2 1342 aaPredicted RBP25.76■■□□□ 1.71
LSM12-202ENST00000585388 DUOX2Q9NRD8 1548 aa25.76■■□□□ 1.71
LSM12-202ENST00000585388 SHANK2Q9UPX8 1470 aa25.75■■□□□ 1.71
LSM12-202ENST00000585388 MROH1Q8NDA8 1641 aa25.74■■□□□ 1.71
LSM12-202ENST00000585388 PTPN23Q9H3S7 1636 aa25.74■■□□□ 1.71
LSM12-202ENST00000585388 NEURL4Q96JN8 1562 aa25.73■■□□□ 1.71
LSM12-202ENST00000585388 UGGT1Q9NYU2 1555 aa25.72■■□□□ 1.71
LSM12-202ENST00000585388 CEP152O94986 1710 aa25.71■■□□□ 1.71
LSM12-202ENST00000585388 SPATA31D1Q6ZQQ2 1576 aa25.71■■□□□ 1.71
LSM12-202ENST00000585388 KIF15Q9NS87 1388 aa25.68■■□□□ 1.7
LSM12-202ENST00000585388 PRDM15P57071 1507 aaPredicted RBP25.68■■□□□ 1.7
LSM12-202ENST00000585388 DEPDC5O75140 1603 aa25.67■■□□□ 1.7
LSM12-202ENST00000585388 THEMISQ8N1K5 641 aaPredicted RBP25.67■■□□□ 1.7
LSM12-202ENST00000585388 ERBINQ96RT1 1412 aa25.67■■□□□ 1.7
LSM12-202ENST00000585388 ERVK-7P63135 1459 aa25.66■■□□□ 1.7
LSM12-202ENST00000585388 ABCC5O15440 1437 aa25.66■■□□□ 1.7
LSM12-202ENST00000585388 FGD6Q6ZV73 1430 aa25.66■■□□□ 1.7
LSM12-202ENST00000585388 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP25.66■■□□□ 1.7
LSM12-202ENST00000585388 DAPK1P53355 1430 aa25.63■■□□□ 1.69
LSM12-202ENST00000585388 CPS1P31327 1500 aa25.63■■□□□ 1.69
LSM12-202ENST00000585388 ANKLE2Q86XL3 938 aa25.63■■□□□ 1.69
LSM12-202ENST00000585388 MED14O60244 1454 aa25.61■■□□□ 1.69
LSM12-202ENST00000585388 IQGAP1P46940 1657 aa25.6■■□□□ 1.69
LSM12-202ENST00000585388 NPHP4O75161 1426 aaPredicted RBP25.59■■□□□ 1.69
LSM12-202ENST00000585388 UBAP1LF5GYI3 381 aa25.58■■□□□ 1.69
LSM12-202ENST00000585388 UBR1Q8IWV7 1749 aa25.57■■□□□ 1.68
LSM12-202ENST00000585388 ARHGAP31Q2M1Z3 1444 aa25.57■■□□□ 1.68
LSM12-202ENST00000585388 DISP3Q9P2K9 1392 aa25.56■■□□□ 1.68
LSM12-202ENST00000585388 RRP7BPQ9NSQ0 103 aa25.56■■□□□ 1.68
LSM12-202ENST00000585388 CFAP65Q6ZU64 1925 aaKnown RBP25.56■■□□□ 1.68
LSM12-202ENST00000585388 VWDEQ8N2E2 1590 aa25.56■■□□□ 1.68
LSM12-202ENST00000585388 ANKRD30AQ9BXX3 1397 aa25.55■■□□□ 1.68
LSM12-202ENST00000585388 KANK1Q14678 1352 aa25.53■■□□□ 1.68
LSM12-202ENST00000585388 LMTK2Q8IWU2 1503 aa25.48■■□□□ 1.67
LSM12-202ENST00000585388 ADGRL2O95490 1459 aa25.47■■□□□ 1.67
LSM12-202ENST00000585388 SCAF11Q99590 1463 aaKnown RBP25.47■■□□□ 1.67
LSM12-202ENST00000585388 GRWD1Q9BQ67 446 aaKnown RBP eCLIP25.47■■□□□ 1.67
LSM12-202ENST00000585388 SYNMO15061 1565 aa25.47■■□□□ 1.67
LSM12-202ENST00000585388 SLIT1O75093 1534 aa25.47■■□□□ 1.67
LSM12-202ENST00000585388 ARHGAP23Q9P227 1491 aa25.46■■□□□ 1.67
LSM12-202ENST00000585388 PIK3C2BO00750 1634 aa25.45■■□□□ 1.67
LSM12-202ENST00000585388 CHIC2Q9UKJ5 165 aa25.45■■□□□ 1.66
LSM12-202ENST00000585388 KDM5AP29375 1690 aaKnown RBP25.45■■□□□ 1.66
LSM12-202ENST00000585388 TOM1O60784 492 aa25.43■■□□□ 1.66
LSM12-202ENST00000585388 EFCAB6Q5THR3 1501 aa25.42■■□□□ 1.66
LSM12-202ENST00000585388 STRCP1A6NGW2 1772 aa25.41■■□□□ 1.66
LSM12-202ENST00000585388 SCAF1Q9H7N4 1312 aaKnown RBP25.39■■□□□ 1.66
LSM12-202ENST00000585388 FAM50AQ14320 339 aaKnown RBP25.39■■□□□ 1.66
LSM12-202ENST00000585388 PIP4K2BP78356 416 aa25.37■■□□□ 1.65
LSM12-202ENST00000585388 LRRC7Q96NW7 1537 aa25.37■■□□□ 1.65
LSM12-202ENST00000585388 EID1Q9Y6B2 187 aa25.36■■□□□ 1.65
LSM12-202ENST00000585388 TXNDC2Q86VQ3 553 aa25.35■■□□□ 1.65
LSM12-202ENST00000585388 ANKRD50Q9ULJ7 1429 aa25.35■■□□□ 1.65
LSM12-202ENST00000585388 TMEM2Q9UHN6 1383 aa25.34■■□□□ 1.65
LSM12-202ENST00000585388 ILDR2Q71H61 639 aa25.34■■□□□ 1.65
LSM12-202ENST00000585388 STAG3Q9UJ98 1225 aa25.34■■□□□ 1.65
LSM12-202ENST00000585388 LTKP29376 864 aa25.33■■□□□ 1.65
LSM12-202ENST00000585388 NOS1P29475 1434 aa25.33■■□□□ 1.65
LSM12-202ENST00000585388 ALKQ9UM73 1620 aa25.33■■□□□ 1.65
LSM12-202ENST00000585388 RPRD2Q5VT52 1461 aaKnown RBP25.33■■□□□ 1.65
LSM12-202ENST00000585388 ADGRB3O60242 1522 aa25.32■■□□□ 1.64
LSM12-202ENST00000585388 TET3O43151 1660 aa25.31■■□□□ 1.64
LSM12-202ENST00000585388 HSPA1LP34931 641 aa25.29■■□□□ 1.64
LSM12-202ENST00000585388 UNC13BO14795 1591 aa25.28■■□□□ 1.64
LSM12-202ENST00000585388 IDI1Q13907 227 aa25.28■■□□□ 1.64
LSM12-202ENST00000585388 GCC2Q8IWJ2 1684 aa25.28■■□□□ 1.64
LSM12-202ENST00000585388 SOCS7O14512 581 aa25.25■■□□□ 1.63
LSM12-202ENST00000585388 MED1Q15648 1581 aaPredicted RBP25.24■■□□□ 1.63
LSM12-202ENST00000585388 SLC52A1Q9NWF4 448 aa25.24■■□□□ 1.63
LSM12-202ENST00000585388 XIRP1Q702N8 1843 aaKnown RBP25.23■■□□□ 1.63
LSM12-202ENST00000585388 ROCK1Q13464 1354 aa25.22■■□□□ 1.63
LSM12-202ENST00000585388 IQGAP3Q86VI3 1631 aa25.19■■□□□ 1.62
LSM12-202ENST00000585388 MYO5BQ9ULV0 1848 aa25.18■■□□□ 1.62
LSM12-202ENST00000585388 NWD1Q149M9 1564 aa25.16■■□□□ 1.62
LSM12-202ENST00000585388 E9PCH4 1651 aa25.16■■□□□ 1.62
LSM12-202ENST00000585388 TMEM131LA2VDJ0 1609 aa25.15■■□□□ 1.62
LSM12-202ENST00000585388 NKTRP30414 1462 aaKnown RBP25.14■■□□□ 1.61
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms