RNA–Protein interactions for RNA: ENST00000584773.5

SRSF1-208, Transcript of serine and arginine rich splicing factor 1, humanhuman

TSL 5 BASIC

Gene SRSF1, Length 1,317 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRSF1-208ENST00000584773 DNMT1P26358 1616 aaKnown RBP28.1■■■□□ 2.09
SRSF1-208ENST00000584773 DAPK1P53355 1430 aa28.09■■■□□ 2.09
SRSF1-208ENST00000584773 RNF17Q9BXT8 1623 aaKnown RBP28.09■■■□□ 2.09
SRSF1-208ENST00000584773 SHANK2Q9UPX8 1470 aa28.07■■■□□ 2.08
SRSF1-208ENST00000584773 WASHC2CQ9Y4E1 1318 aa28.07■■■□□ 2.08
SRSF1-208ENST00000584773 EIF2AK4Q9P2K8 1649 aaKnown RBP28.06■■■□□ 2.08
SRSF1-208ENST00000584773 ZNF142P52746 1687 aaPredicted RBP28.06■■■□□ 2.08
SRSF1-208ENST00000584773 FBXO31Q5XUX0 539 aaPredicted RBP28.06■■■□□ 2.08
SRSF1-208ENST00000584773 CAMSAP1Q5T5Y3 1602 aa28.06■■■□□ 2.08
SRSF1-208ENST00000584773 MROH1Q8NDA8 1641 aa28.06■■■□□ 2.08
SRSF1-208ENST00000584773 DUOX2Q9NRD8 1548 aa28.05■■■□□ 2.08
SRSF1-208ENST00000584773 CEP170BQ9Y4F5 1589 aaPredicted RBP28.04■■■□□ 2.08
SRSF1-208ENST00000584773 FAM135AQ9P2D6 1515 aa28.04■■■□□ 2.08
SRSF1-208ENST00000584773 KIF15Q9NS87 1388 aa28.04■■■□□ 2.08
SRSF1-208ENST00000584773 NCOA1Q15788 1441 aa28.03■■■□□ 2.08
SRSF1-208ENST00000584773 RRP7BPQ9NSQ0 103 aa28.03■■■□□ 2.08
SRSF1-208ENST00000584773 PZPP20742 1482 aa28.02■■■□□ 2.08
SRSF1-208ENST00000584773 CHIC2Q9UKJ5 165 aa28.02■■■□□ 2.08
SRSF1-208ENST00000584773 ABCC3O15438 1527 aa28.01■■■□□ 2.07
SRSF1-208ENST00000584773 CEP152O94986 1710 aa27.99■■■□□ 2.07
SRSF1-208ENST00000584773 FAM50AQ14320 339 aaKnown RBP27.97■■■□□ 2.07
SRSF1-208ENST00000584773 PPARGC1BQ86YN6 1023 aaKnown RBP27.97■■■□□ 2.07
SRSF1-208ENST00000584773 TNRQ92752 1358 aa27.97■■■□□ 2.07
SRSF1-208ENST00000584773 ZC3H13Q5T200 1668 aaKnown RBP27.97■■■□□ 2.07
SRSF1-208ENST00000584773 NCKAP5LQ9HCH0 1330 aa27.95■■■□□ 2.07
SRSF1-208ENST00000584773 DMRT2Q9Y5R5 561 aa27.95■■■□□ 2.07
SRSF1-208ENST00000584773 PTPRTO14522 1441 aa27.95■■■□□ 2.06
SRSF1-208ENST00000584773 FBXO41Q8TF61 875 aa27.94■■■□□ 2.06
SRSF1-208ENST00000584773 A2ML1A8K2U0 1454 aa27.94■■■□□ 2.06
SRSF1-208ENST00000584773 ERBINQ96RT1 1412 aa27.94■■■□□ 2.06
SRSF1-208ENST00000584773 PRDM15P57071 1507 aaPredicted RBP27.91■■■□□ 2.06
SRSF1-208ENST00000584773 CERKQ8TCT0 537 aa27.91■■■□□ 2.06
SRSF1-208ENST00000584773 CFAP65Q6ZU64 1925 aaKnown RBP27.9■■■□□ 2.06
SRSF1-208ENST00000584773 ANKRD30AQ9BXX3 1397 aa27.9■■■□□ 2.06
SRSF1-208ENST00000584773 PLA2R1Q13018 1463 aa27.89■■■□□ 2.06
SRSF1-208ENST00000584773 GRWD1Q9BQ67 446 aaKnown RBP eCLIP27.88■■■□□ 2.051e-15■■□□□ 13.7
SRSF1-208ENST00000584773 DEPDC5O75140 1603 aa27.87■■■□□ 2.05
SRSF1-208ENST00000584773 ADGRL2O95490 1459 aa27.86■■■□□ 2.05
SRSF1-208ENST00000584773 ERVK-7P63135 1459 aa27.86■■■□□ 2.05
SRSF1-208ENST00000584773 SPATA31D1Q6ZQQ2 1576 aa27.86■■■□□ 2.05
SRSF1-208ENST00000584773 LTBP4Q8N2S1 1624 aa27.81■■■□□ 2.04
SRSF1-208ENST00000584773 NLRP1Q9C000 1473 aa27.81■■■□□ 2.04
SRSF1-208ENST00000584773 PKD2Q13563 968 aa27.8■■■□□ 2.04
SRSF1-208ENST00000584773 UGGT1Q9NYU2 1555 aa27.79■■■□□ 2.04
SRSF1-208ENST00000584773 POLR1AO95602 1720 aaPredicted RBP27.79■■■□□ 2.04
SRSF1-208ENST00000584773 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP27.79■■■□□ 2.04
SRSF1-208ENST00000584773 NEURL4Q96JN8 1562 aa27.77■■■□□ 2.04
SRSF1-208ENST00000584773 VWDEQ8N2E2 1590 aa27.76■■■□□ 2.03
SRSF1-208ENST00000584773 ZNF335Q9H4Z2 1342 aaPredicted RBP27.75■■■□□ 2.03
SRSF1-208ENST00000584773 KANK1Q14678 1352 aa27.74■■■□□ 2.03
SRSF1-208ENST00000584773 ARHGAP31Q2M1Z3 1444 aa27.74■■■□□ 2.03
SRSF1-208ENST00000584773 ANKRD50Q9ULJ7 1429 aa27.73■■■□□ 2.03
SRSF1-208ENST00000584773 ITGAEP38570 1179 aa27.72■■■□□ 2.03
SRSF1-208ENST00000584773 LMTK2Q8IWU2 1503 aa27.72■■■□□ 2.03
SRSF1-208ENST00000584773 THEMISQ8N1K5 641 aaPredicted RBP27.7■■■□□ 2.03
SRSF1-208ENST00000584773 UBR1Q8IWV7 1749 aa27.7■■■□□ 2.02
SRSF1-208ENST00000584773 EFCAB6Q5THR3 1501 aa27.67■■■□□ 2.02
SRSF1-208ENST00000584773 ANKLE2Q86XL3 938 aa27.66■■■□□ 2.02
SRSF1-208ENST00000584773 PIK3C2BO00750 1634 aa27.64■■■□□ 2.02
SRSF1-208ENST00000584773 SYNMO15061 1565 aa27.63■■■□□ 2.01
SRSF1-208ENST00000584773 ROCK1Q13464 1354 aa27.63■■■□□ 2.01
SRSF1-208ENST00000584773 UNC13BO14795 1591 aa27.61■■■□□ 2.01
SRSF1-208ENST00000584773 NPHP4O75161 1426 aaPredicted RBP27.61■■■□□ 2.01
SRSF1-208ENST00000584773 IQGAP1P46940 1657 aa27.59■■■□□ 2.01
SRSF1-208ENST00000584773 MED14O60244 1454 aa27.59■■■□□ 2.01
SRSF1-208ENST00000584773 TET3O43151 1660 aa27.57■■■□□ 2
SRSF1-208ENST00000584773 NOS1P29475 1434 aa27.57■■■□□ 2
SRSF1-208ENST00000584773 RRBP1Q9P2E9 1410 aaKnown RBP27.56■■■□□ 2
SRSF1-208ENST00000584773 IDI1Q13907 227 aa27.55■■■□□ 2
SRSF1-208ENST00000584773 IQSEC2Q5JU85 1478 aa27.55■■■□□ 2
SRSF1-208ENST00000584773 ARHGAP23Q9P227 1491 aa27.54■■■□□ 2
SRSF1-208ENST00000584773 GCC2Q8IWJ2 1684 aa27.53■■■□□ 2
SRSF1-208ENST00000584773 SLIT1O75093 1534 aa27.53■■■□□ 2
SRSF1-208ENST00000584773 LTKP29376 864 aa27.53■■■□□ 2
SRSF1-208ENST00000584773 SCAF11Q99590 1463 aaKnown RBP27.52■■■□□ 2
SRSF1-208ENST00000584773 IQGAP3Q86VI3 1631 aa27.5■■□□□ 1.99
SRSF1-208ENST00000584773 E9PCH4 1651 aa27.5■■□□□ 1.99
SRSF1-208ENST00000584773 STAG3Q9UJ98 1225 aa27.49■■□□□ 1.99
SRSF1-208ENST00000584773 RPRD2Q5VT52 1461 aaKnown RBP27.49■■□□□ 1.99
SRSF1-208ENST00000584773 STRCP1A6NGW2 1772 aa27.49■■□□□ 1.99
SRSF1-208ENST00000584773 TXNDC2Q86VQ3 553 aa27.48■■□□□ 1.99
SRSF1-208ENST00000584773 ADGRB3O60242 1522 aa27.47■■□□□ 1.99
SRSF1-208ENST00000584773 TMEM2Q9UHN6 1383 aa27.47■■□□□ 1.99
SRSF1-208ENST00000584773 KDM5AP29375 1690 aaKnown RBP27.46■■□□□ 1.99
SRSF1-208ENST00000584773 CPS1P31327 1500 aa27.46■■□□□ 1.99
SRSF1-208ENST00000584773 MYO5BQ9ULV0 1848 aa27.45■■□□□ 1.98
SRSF1-208ENST00000584773 NUP155O75694 1391 aa27.45■■□□□ 1.98
SRSF1-208ENST00000584773 UBAP1LF5GYI3 381 aa27.42■■□□□ 1.98
SRSF1-208ENST00000584773 EID1Q9Y6B2 187 aa27.41■■□□□ 1.98
SRSF1-208ENST00000584773 SLC52A1Q9NWF4 448 aa27.4■■□□□ 1.98
SRSF1-208ENST00000584773 NAIPQ13075 1403 aa27.38■■□□□ 1.97
SRSF1-208ENST00000584773 SENP3Q9H4L4 574 aaPredicted RBP27.37■■□□□ 1.97
SRSF1-208ENST00000584773 TMEM131LA2VDJ0 1609 aa27.36■■□□□ 1.97
SRSF1-208ENST00000584773 LRRC7Q96NW7 1537 aa27.34■■□□□ 1.97
SRSF1-208ENST00000584773 CHGAP10645 457 aaKnown RBP27.32■■□□□ 1.96
SRSF1-208ENST00000584773 ZFYVE9O95405 1425 aa27.31■■□□□ 1.96
SRSF1-208ENST00000584773 SLC26A8Q96RN1 970 aa27.3■■□□□ 1.96
SRSF1-208ENST00000584773 ALKQ9UM73 1620 aa27.29■■□□□ 1.96
SRSF1-208ENST00000584773 RIMS2Q9UQ26 1411 aa27.28■■□□□ 1.96
SRSF1-208ENST00000584773 SPHKAPQ2M3C7 1700 aa27.28■■□□□ 1.96
Retrieved 100 of 20,778 RNA–protein pairs in 11.1 ms