RNA–Protein interactions for RNA: ENST00000584074.5

PPP4R1-228, Transcript of protein phosphatase 4 regulatory subunit 1, humanhuman

TSL 3

Gene PPP4R1, Length 625 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPP4R1-228ENST00000584074 STRCQ7RTU9 1775 aa33.31■■■□□ 2.92
PPP4R1-228ENST00000584074 FAM135AQ9P2D6 1515 aa33.3■■■□□ 2.92
PPP4R1-228ENST00000584074 CROCC2H7BZ55 1655 aa33.29■■■□□ 2.92
PPP4R1-228ENST00000584074 DNMT1P26358 1616 aaKnown RBP33.29■■■□□ 2.92
PPP4R1-228ENST00000584074 RRP7BPQ9NSQ0 103 aa33.29■■■□□ 2.92
PPP4R1-228ENST00000584074 KIF15Q9NS87 1388 aa33.29■■■□□ 2.92
PPP4R1-228ENST00000584074 FBXO31Q5XUX0 539 aaPredicted RBP33.28■■■□□ 2.92
PPP4R1-228ENST00000584074 DUOX2Q9NRD8 1548 aa33.28■■■□□ 2.92
PPP4R1-228ENST00000584074 DMRT2Q9Y5R5 561 aa33.27■■■□□ 2.92
PPP4R1-228ENST00000584074 RNF17Q9BXT8 1623 aaKnown RBP33.27■■■□□ 2.92
PPP4R1-228ENST00000584074 MYO3AQ8NEV4 1616 aa33.26■■■□□ 2.91
PPP4R1-228ENST00000584074 EIF2AK4Q9P2K8 1649 aaKnown RBP33.25■■■□□ 2.91
PPP4R1-228ENST00000584074 CHIC2Q9UKJ5 165 aa33.25■■■□□ 2.91
PPP4R1-228ENST00000584074 PZPP20742 1482 aa33.25■■■□□ 2.91
PPP4R1-228ENST00000584074 NCOA1Q15788 1441 aa33.23■■■□□ 2.91
PPP4R1-228ENST00000584074 FAM50AQ14320 339 aaKnown RBP33.23■■■□□ 2.91
PPP4R1-228ENST00000584074 CAMSAP1Q5T5Y3 1602 aa33.21■■■□□ 2.91
PPP4R1-228ENST00000584074 CEP170BQ9Y4F5 1589 aaPredicted RBP33.21■■■□□ 2.91
PPP4R1-228ENST00000584074 ABCC3O15438 1527 aa33.19■■■□□ 2.9
PPP4R1-228ENST00000584074 MROH1Q8NDA8 1641 aa33.19■■■□□ 2.9
PPP4R1-228ENST00000584074 TNRQ92752 1358 aa33.19■■■□□ 2.9
PPP4R1-228ENST00000584074 ZNF142P52746 1687 aaPredicted RBP33.18■■■□□ 2.9
PPP4R1-228ENST00000584074 ERBINQ96RT1 1412 aa33.18■■■□□ 2.9
PPP4R1-228ENST00000584074 ANKRD30AQ9BXX3 1397 aa33.17■■■□□ 2.9
PPP4R1-228ENST00000584074 PTPRTO14522 1441 aa33.16■■■□□ 2.9
PPP4R1-228ENST00000584074 PPARGC1BQ86YN6 1023 aaKnown RBP33.15■■■□□ 2.9
PPP4R1-228ENST00000584074 FBXO41Q8TF61 875 aa33.15■■■□□ 2.9
PPP4R1-228ENST00000584074 A2ML1A8K2U0 1454 aa33.14■■■□□ 2.9
PPP4R1-228ENST00000584074 NCKAP5LQ9HCH0 1330 aa33.13■■■□□ 2.89
PPP4R1-228ENST00000584074 ZC3H13Q5T200 1668 aaKnown RBP33.12■■■□□ 2.89
PPP4R1-228ENST00000584074 CERKQ8TCT0 537 aa33.1■■■□□ 2.89
PPP4R1-228ENST00000584074 GRWD1Q9BQ67 446 aaKnown RBP eCLIP33.09■■■□□ 2.892e-6■■□□□ 14.2
PPP4R1-228ENST00000584074 PLA2R1Q13018 1463 aa33.09■■■□□ 2.89
PPP4R1-228ENST00000584074 PRDM15P57071 1507 aaPredicted RBP33.07■■■□□ 2.89
PPP4R1-228ENST00000584074 ADGRL2O95490 1459 aa33.07■■■□□ 2.88
PPP4R1-228ENST00000584074 CEP152O94986 1710 aa33.05■■■□□ 2.88
PPP4R1-228ENST00000584074 PKD2Q13563 968 aa33.05■■■□□ 2.88
PPP4R1-228ENST00000584074 NLRP1Q9C000 1473 aa33.02■■■□□ 2.88
PPP4R1-228ENST00000584074 DEPDC5O75140 1603 aa33.02■■■□□ 2.88
PPP4R1-228ENST00000584074 ERVK-7P63135 1459 aa33.01■■■□□ 2.88
PPP4R1-228ENST00000584074 SPATA31D1Q6ZQQ2 1576 aa33■■■□□ 2.87
PPP4R1-228ENST00000584074 KANK1Q14678 1352 aa32.98■■■□□ 2.87
PPP4R1-228ENST00000584074 ARHGAP31Q2M1Z3 1444 aa32.95■■■□□ 2.87
PPP4R1-228ENST00000584074 THEMISQ8N1K5 641 aaPredicted RBP32.95■■■□□ 2.87
PPP4R1-228ENST00000584074 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP32.95■■■□□ 2.861e-18■■■■□ 20.3
PPP4R1-228ENST00000584074 UGGT1Q9NYU2 1555 aa32.94■■■□□ 2.86
PPP4R1-228ENST00000584074 ANKRD50Q9ULJ7 1429 aa32.94■■■□□ 2.86
PPP4R1-228ENST00000584074 LTBP4Q8N2S1 1624 aa32.91■■■□□ 2.86
PPP4R1-228ENST00000584074 VWDEQ8N2E2 1590 aa32.91■■■□□ 2.86
PPP4R1-228ENST00000584074 ITGAEP38570 1179 aa32.9■■■□□ 2.86
PPP4R1-228ENST00000584074 LMTK2Q8IWU2 1503 aa32.88■■■□□ 2.85
PPP4R1-228ENST00000584074 ZNF335Q9H4Z2 1342 aaPredicted RBP32.87■■■□□ 2.85
PPP4R1-228ENST00000584074 ANKLE2Q86XL3 938 aa32.87■■■□□ 2.85
PPP4R1-228ENST00000584074 CFAP65Q6ZU64 1925 aaKnown RBP32.86■■■□□ 2.85
PPP4R1-228ENST00000584074 ROCK1Q13464 1354 aa32.85■■■□□ 2.85
PPP4R1-228ENST00000584074 NEURL4Q96JN8 1562 aa32.85■■■□□ 2.85
PPP4R1-228ENST00000584074 POLR1AO95602 1720 aaPredicted RBP32.82■■■□□ 2.85
PPP4R1-228ENST00000584074 EFCAB6Q5THR3 1501 aa32.79■■■□□ 2.84
PPP4R1-228ENST00000584074 UBR1Q8IWV7 1749 aa32.76■■■□□ 2.83
PPP4R1-228ENST00000584074 NPHP4O75161 1426 aaPredicted RBP32.75■■■□□ 2.83
PPP4R1-228ENST00000584074 MED14O60244 1454 aa32.74■■■□□ 2.83
PPP4R1-228ENST00000584074 RRBP1Q9P2E9 1410 aaKnown RBP32.74■■■□□ 2.83
PPP4R1-228ENST00000584074 NOS1P29475 1434 aa32.72■■■□□ 2.83
PPP4R1-228ENST00000584074 UNC13BO14795 1591 aa32.71■■■□□ 2.83
PPP4R1-228ENST00000584074 IDI1Q13907 227 aa32.71■■■□□ 2.83
PPP4R1-228ENST00000584074 SYNMO15061 1565 aa32.7■■■□□ 2.83
PPP4R1-228ENST00000584074 PIK3C2BO00750 1634 aa32.69■■■□□ 2.82
PPP4R1-228ENST00000584074 IQSEC2Q5JU85 1478 aa32.69■■■□□ 2.82
PPP4R1-228ENST00000584074 STAG3Q9UJ98 1225 aa32.67■■■□□ 2.82
PPP4R1-228ENST00000584074 RPRD2Q5VT52 1461 aaKnown RBP32.67■■■□□ 2.82
PPP4R1-228ENST00000584074 ARHGAP23Q9P227 1491 aa32.67■■■□□ 2.82
PPP4R1-228ENST00000584074 LTKP29376 864 aa32.66■■■□□ 2.82
PPP4R1-228ENST00000584074 SLIT1O75093 1534 aa32.66■■■□□ 2.82
PPP4R1-228ENST00000584074 TET3O43151 1660 aa32.66■■■□□ 2.82
PPP4R1-228ENST00000584074 TXNDC2Q86VQ3 553 aa32.65■■■□□ 2.82
PPP4R1-228ENST00000584074 SCAF11Q99590 1463 aaKnown RBP32.65■■■□□ 2.82
PPP4R1-228ENST00000584074 IQGAP1P46940 1657 aa32.64■■■□□ 2.82
PPP4R1-228ENST00000584074 SLC52A1Q9NWF4 448 aa32.62■■■□□ 2.81
PPP4R1-228ENST00000584074 NUP155O75694 1391 aa32.61■■■□□ 2.81
PPP4R1-228ENST00000584074 TMEM2Q9UHN6 1383 aa32.61■■■□□ 2.81
PPP4R1-228ENST00000584074 EID1Q9Y6B2 187 aa32.6■■■□□ 2.81
PPP4R1-228ENST00000584074 GCC2Q8IWJ2 1684 aa32.58■■■□□ 2.81
PPP4R1-228ENST00000584074 IQGAP3Q86VI3 1631 aa32.58■■■□□ 2.81
PPP4R1-228ENST00000584074 CPS1P31327 1500 aa32.56■■■□□ 2.8
PPP4R1-228ENST00000584074 KDM5AP29375 1690 aaKnown RBP32.56■■■□□ 2.8
PPP4R1-228ENST00000584074 ADGRB3O60242 1522 aa32.55■■■□□ 2.8
PPP4R1-228ENST00000584074 UBAP1LF5GYI3 381 aa32.53■■■□□ 2.8
PPP4R1-228ENST00000584074 E9PCH4 1651 aa32.53■■■□□ 2.8
PPP4R1-228ENST00000584074 NAIPQ13075 1403 aa32.51■■■□□ 2.79
PPP4R1-228ENST00000584074 STRCP1A6NGW2 1772 aa32.43■■■□□ 2.78
PPP4R1-228ENST00000584074 CHGAP10645 457 aaKnown RBP32.42■■■□□ 2.78
PPP4R1-228ENST00000584074 TMEM131LA2VDJ0 1609 aa32.41■■■□□ 2.78
PPP4R1-228ENST00000584074 HFM1A2PYH4 1435 aa32.4■■■□□ 2.78
PPP4R1-228ENST00000584074 SLC26A8Q96RN1 970 aa32.39■■■□□ 2.78
PPP4R1-228ENST00000584074 ZFYVE9O95405 1425 aa32.39■■■□□ 2.78
PPP4R1-228ENST00000584074 LRRC7Q96NW7 1537 aa32.39■■■□□ 2.78
PPP4R1-228ENST00000584074 RIMS2Q9UQ26 1411 aa32.37■■■□□ 2.77
PPP4R1-228ENST00000584074 SENP3Q9H4L4 574 aaPredicted RBP32.37■■■□□ 2.77
PPP4R1-228ENST00000584074 MYO5BQ9ULV0 1848 aa32.35■■■□□ 2.77
PPP4R1-228ENST00000584074 TOM1O60784 492 aa32.34■■■□□ 2.77
Retrieved 100 of 20,778 RNA–protein pairs in 49.9 ms