RNA–Protein interactions for RNA: ENST00000583927.1

SKA2-208, Transcript of spindle and kinetochore associated complex subunit 2, humanhuman

TSL 2

Gene SKA2, Length 533 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKA2-208ENST00000583927 ABCC5O15440 1437 aa15.41■□□□□ 0.06
SKA2-208ENST00000583927 ZNF142P52746 1687 aaPredicted RBP15.41■□□□□ 0.06
SKA2-208ENST00000583927 STRCQ7RTU9 1775 aa15.4■□□□□ 0.06
SKA2-208ENST00000583927 GGT6Q6P531 493 aa15.4■□□□□ 0.06
SKA2-208ENST00000583927 DAPK1P53355 1430 aa15.4■□□□□ 0.06
SKA2-208ENST00000583927 KIF3BO15066 747 aa15.39■□□□□ 0.05
SKA2-208ENST00000583927 PTPRKQ15262 1439 aa15.38■□□□□ 0.05
SKA2-208ENST00000583927 PLPPR3Q6T4P5 718 aa15.38■□□□□ 0.05
SKA2-208ENST00000583927 MROH1Q8NDA8 1641 aa15.37■□□□□ 0.05
SKA2-208ENST00000583927 DEPDC5O75140 1603 aa15.36■□□□□ 0.05
SKA2-208ENST00000583927 MYO3AQ8NEV4 1616 aa15.36■□□□□ 0.05
SKA2-208ENST00000583927 ERBINQ96RT1 1412 aa15.36■□□□□ 0.05
SKA2-208ENST00000583927 ADGRL2O95490 1459 aa15.35■□□□□ 0.05
SKA2-208ENST00000583927 PZPP20742 1482 aa15.35■□□□□ 0.05
SKA2-208ENST00000583927 HSPA2P54652 639 aa15.35■□□□□ 0.05
SKA2-208ENST00000583927 KIF15Q9NS87 1388 aa15.35■□□□□ 0.05
SKA2-208ENST00000583927 PRDM15P57071 1507 aaPredicted RBP15.34■□□□□ 0.05
SKA2-208ENST00000583927 CEP152O94986 1710 aa15.33■□□□□ 0.04
SKA2-208ENST00000583927 NCOA1Q15788 1441 aa15.33■□□□□ 0.04
SKA2-208ENST00000583927 ABCC3O15438 1527 aa15.33■□□□□ 0.04
SKA2-208ENST00000583927 CEP170BQ9Y4F5 1589 aaPredicted RBP15.32■□□□□ 0.04
SKA2-208ENST00000583927 WASHC2CQ9Y4E1 1318 aa15.32■□□□□ 0.04
SKA2-208ENST00000583927 ANKRD30AQ9BXX3 1397 aa15.32■□□□□ 0.04
SKA2-208ENST00000583927 CFAP65Q6ZU64 1925 aaKnown RBP15.31■□□□□ 0.04
SKA2-208ENST00000583927 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP15.31■□□□□ 0.044e-8■■■■■ 44
SKA2-208ENST00000583927 CAMSAP1Q5T5Y3 1602 aa15.31■□□□□ 0.04
SKA2-208ENST00000583927 PLA2R1Q13018 1463 aa15.29■□□□□ 0.04
SKA2-208ENST00000583927 DMRT2Q9Y5R5 561 aa15.29■□□□□ 0.04
SKA2-208ENST00000583927 SPATA31D1Q6ZQQ2 1576 aa15.28■□□□□ 0.04
SKA2-208ENST00000583927 A2ML1A8K2U0 1454 aa15.28■□□□□ 0.04
SKA2-208ENST00000583927 PTPRTO14522 1441 aa15.28■□□□□ 0.04
SKA2-208ENST00000583927 VWDEQ8N2E2 1590 aa15.28■□□□□ 0.04
SKA2-208ENST00000583927 ARHGAP31Q2M1Z3 1444 aa15.27■□□□□ 0.04
SKA2-208ENST00000583927 RRP7BPQ9NSQ0 103 aa15.27■□□□□ 0.04
SKA2-208ENST00000583927 LMTK2Q8IWU2 1503 aa15.26■□□□□ 0.03
SKA2-208ENST00000583927 NLRP1Q9C000 1473 aa15.26■□□□□ 0.03
SKA2-208ENST00000583927 TNRQ92752 1358 aa15.25■□□□□ 0.03
SKA2-208ENST00000583927 FAM50AQ14320 339 aaKnown RBP15.25■□□□□ 0.03
SKA2-208ENST00000583927 POLR1AO95602 1720 aaPredicted RBP15.25■□□□□ 0.03
SKA2-208ENST00000583927 ROCK1Q13464 1354 aa15.24■□□□□ 0.03
SKA2-208ENST00000583927 ERVK-7P63135 1459 aa15.23■□□□□ 0.03
SKA2-208ENST00000583927 CHIC2Q9UKJ5 165 aa15.23■□□□□ 0.03
SKA2-208ENST00000583927 FBXO31Q5XUX0 539 aaPredicted RBP15.22■□□□□ 0.03
SKA2-208ENST00000583927 KANK1Q14678 1352 aa15.22■□□□□ 0.03
SKA2-208ENST00000583927 RRBP1Q9P2E9 1410 aaKnown RBP15.21■□□□□ 0.03
SKA2-208ENST00000583927 ANKRD50Q9ULJ7 1429 aa15.21■□□□□ 0.03
SKA2-208ENST00000583927 PKD2Q13563 968 aa15.21■□□□□ 0.03
SKA2-208ENST00000583927 KDM5AP29375 1690 aaKnown RBP15.21■□□□□ 0.03
SKA2-208ENST00000583927 UNC13BO14795 1591 aa15.2■□□□□ 0.02
SKA2-208ENST00000583927 UGGT1Q9NYU2 1555 aa15.19■□□□□ 0.02
SKA2-208ENST00000583927 GCC2Q8IWJ2 1684 aa15.19■□□□□ 0.02
SKA2-208ENST00000583927 EFCAB6Q5THR3 1501 aa15.19■□□□□ 0.02
SKA2-208ENST00000583927 UBR1Q8IWV7 1749 aa15.19■□□□□ 0.02
SKA2-208ENST00000583927 TET3O43151 1660 aa15.18■□□□□ 0.02
SKA2-208ENST00000583927 RPRD2Q5VT52 1461 aaKnown RBP15.16■□□□□ 0.02
SKA2-208ENST00000583927 THEMISQ8N1K5 641 aaPredicted RBP15.16■□□□□ 0.02
SKA2-208ENST00000583927 NEURL4Q96JN8 1562 aa15.15■□□□□ 0.02
SKA2-208ENST00000583927 IQGAP3Q86VI3 1631 aa15.15■□□□□ 0.02
SKA2-208ENST00000583927 ILDR1Q86SU0 546 aaPredicted RBP15.15■□□□□ 0.02
SKA2-208ENST00000583927 LTBP4Q8N2S1 1624 aa15.14■□□□□ 0.01
SKA2-208ENST00000583927 FBXO41Q8TF61 875 aa15.14■□□□□ 0.01
SKA2-208ENST00000583927 MED14O60244 1454 aa15.14■□□□□ 0.01
SKA2-208ENST00000583927 GRWD1Q9BQ67 446 aaKnown RBP eCLIP15.13■□□□□ 0.012e-10■□□□□ 10.6
SKA2-208ENST00000583927 IQSEC2Q5JU85 1478 aa15.13■□□□□ 0.01
SKA2-208ENST00000583927 NCKAP5LQ9HCH0 1330 aa15.13■□□□□ 0.01
SKA2-208ENST00000583927 NOS1P29475 1434 aa15.12■□□□□ 0.01
SKA2-208ENST00000583927 PPARGC1BQ86YN6 1023 aaKnown RBP15.12■□□□□ 0.01
SKA2-208ENST00000583927 CERKQ8TCT0 537 aa15.12■□□□□ 0.01
SKA2-208ENST00000583927 PIK3C2BO00750 1634 aa15.12■□□□□ 0.01
SKA2-208ENST00000583927 SYNMO15061 1565 aa15.11■□□□□ 0.01
SKA2-208ENST00000583927 SLIT1O75093 1534 aa15.11■□□□□ 0.01
SKA2-208ENST00000583927 E9PCH4 1651 aa15.1■□□□□ 0.01
SKA2-208ENST00000583927 IQGAP1P46940 1657 aa15.1■□□□□ 0.01
SKA2-208ENST00000583927 ARHGAP23Q9P227 1491 aa15.1■□□□□ 0.01
SKA2-208ENST00000583927 ANKLE2Q86XL3 938 aa15.09■□□□□ 0.01
SKA2-208ENST00000583927 MYO5BQ9ULV0 1848 aa15.07■□□□□ 0
SKA2-208ENST00000583927 SLC52A1Q9NWF4 448 aa15.06■□□□□ 0
SKA2-208ENST00000583927 NAIPQ13075 1403 aa15.05■□□□□ -0
SKA2-208ENST00000583927 ADGRB3O60242 1522 aa15.05■□□□□ -0
SKA2-208ENST00000583927 SCAF11Q99590 1463 aaKnown RBP15.04■□□□□ -0
SKA2-208ENST00000583927 NPHP4O75161 1426 aaPredicted RBP15.04■□□□□ -0
SKA2-208ENST00000583927 ITGAEP38570 1179 aa15.04■□□□□ -0
SKA2-208ENST00000583927 IDI1Q13907 227 aa15.03■□□□□ -0
SKA2-208ENST00000583927 SPHKAPQ2M3C7 1700 aa15.03■□□□□ -0
SKA2-208ENST00000583927 CPS1P31327 1500 aa15.02■□□□□ -0
SKA2-208ENST00000583927 HFM1A2PYH4 1435 aa15.02■□□□□ -0
SKA2-208ENST00000583927 NUP155O75694 1391 aa15.02■□□□□ -0
SKA2-208ENST00000583927 TMEM131LA2VDJ0 1609 aa15.02□□□□□ -0.01
SKA2-208ENST00000583927 TMEM2Q9UHN6 1383 aa15.01□□□□□ -0.01
SKA2-208ENST00000583927 ZNF335Q9H4Z2 1342 aaPredicted RBP15.01□□□□□ -0.01
SKA2-208ENST00000583927 STRCP1A6NGW2 1772 aa15□□□□□ -0.01
SKA2-208ENST00000583927 LTKP29376 864 aa14.98□□□□□ -0.01
SKA2-208ENST00000583927 EID1Q9Y6B2 187 aa14.98□□□□□ -0.01
SKA2-208ENST00000583927 TXNDC2Q86VQ3 553 aa14.97□□□□□ -0.01
SKA2-208ENST00000583927 STAG3Q9UJ98 1225 aa14.97□□□□□ -0.01
SKA2-208ENST00000583927 ZFYVE9O95405 1425 aa14.95□□□□□ -0.02
SKA2-208ENST00000583927 KIF1BO60333 1816 aa14.94□□□□□ -0.02
SKA2-208ENST00000583927 TRPM2O94759 1503 aa14.92□□□□□ -0.02
SKA2-208ENST00000583927 XIRP1Q702N8 1843 aaKnown RBP14.92□□□□□ -0.02
SKA2-208ENST00000583927 CHD2O14647 1828 aaKnown RBP14.92□□□□□ -0.02
Retrieved 100 of 20,778 RNA–protein pairs in 37.4 ms