RNA–Protein interactions for RNA: ENST00000583499.1

ARHGDIA-213, Transcript of Rho GDP dissociation inhibitor alpha, humanhuman

TSL 2

Gene ARHGDIA, Length 560 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ARHGDIA-213ENST00000583499 PREX1Q8TCU6 1659 aa37.07■■■■□ 3.52
ARHGDIA-213ENST00000583499 ERBINQ96RT1 1412 aa37.06■■■■□ 3.52
ARHGDIA-213ENST00000583499 CNTLNQ9NXG0 1405 aa37.06■■■■□ 3.52
ARHGDIA-213ENST00000583499 FAM135AQ9P2D6 1515 aa37.05■■■■□ 3.52
ARHGDIA-213ENST00000583499 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP37.05■■■■□ 3.525e-6■■□□□ 11.5
ARHGDIA-213ENST00000583499 CEBPAP49715 358 aaPredicted RBP37.05■■■■□ 3.52
ARHGDIA-213ENST00000583499 CHIC2Q9UKJ5 165 aa37.05■■■■□ 3.52
ARHGDIA-213ENST00000583499 ZC3H13Q5T200 1668 aaKnown RBP37.05■■■■□ 3.52
ARHGDIA-213ENST00000583499 KIF3BO15066 747 aa37.02■■■■□ 3.52
ARHGDIA-213ENST00000583499 PLPPR3Q6T4P5 718 aa37.02■■■■□ 3.52
ARHGDIA-213ENST00000583499 ABCC3O15438 1527 aa37.01■■■■□ 3.52
ARHGDIA-213ENST00000583499 GGT6Q6P531 493 aa37.01■■■■□ 3.52
ARHGDIA-213ENST00000583499 RRP7BPQ9NSQ0 103 aa37■■■■□ 3.51
ARHGDIA-213ENST00000583499 ANKRD30AQ9BXX3 1397 aa37■■■■□ 3.51
ARHGDIA-213ENST00000583499 CAMSAP1Q5T5Y3 1602 aa36.97■■■■□ 3.51
ARHGDIA-213ENST00000583499 VWDEQ8N2E2 1590 aa36.95■■■■□ 3.51
ARHGDIA-213ENST00000583499 MYO3AQ8NEV4 1616 aa36.93■■■■□ 3.5
ARHGDIA-213ENST00000583499 ZMYM3Q14202 1370 aa36.91■■■■□ 3.5
ARHGDIA-213ENST00000583499 UNC13BO14795 1591 aa36.9■■■■□ 3.5
ARHGDIA-213ENST00000583499 GCC2Q8IWJ2 1684 aa36.9■■■■□ 3.5
ARHGDIA-213ENST00000583499 ROCK1Q13464 1354 aa36.89■■■■□ 3.5
ARHGDIA-213ENST00000583499 ZNF142P52746 1687 aaPredicted RBP36.88■■■■□ 3.49
ARHGDIA-213ENST00000583499 SETD1BQ9UPS6 1966 aaKnown RBP36.87■■■■□ 3.49
ARHGDIA-213ENST00000583499 PZPP20742 1482 aa36.86■■■■□ 3.49
ARHGDIA-213ENST00000583499 NPATQ14207 1427 aa36.85■■■■□ 3.49
ARHGDIA-213ENST00000583499 ANKRD50Q9ULJ7 1429 aa36.84■■■■□ 3.49
ARHGDIA-213ENST00000583499 ITGAEP38570 1179 aa36.81■■■■□ 3.48
ARHGDIA-213ENST00000583499 ESF1Q9H501 851 aaKnown RBP36.81■■■■□ 3.48
ARHGDIA-213ENST00000583499 PPP6R1Q9UPN7 881 aa36.81■■■■□ 3.48
ARHGDIA-213ENST00000583499 LMTK2Q8IWU2 1503 aa36.78■■■■□ 3.48
ARHGDIA-213ENST00000583499 SPATA31D1Q6ZQQ2 1576 aa36.76■■■■□ 3.48
ARHGDIA-213ENST00000583499 CFAP65Q6ZU64 1925 aaKnown RBP36.76■■■■□ 3.48
ARHGDIA-213ENST00000583499 UHRF1BP1Q6BDS2 1440 aa36.74■■■■□ 3.47
ARHGDIA-213ENST00000583499 WASHC2CQ9Y4E1 1318 aa36.73■■■■□ 3.47
ARHGDIA-213ENST00000583499 EFCAB6Q5THR3 1501 aa36.73■■■■□ 3.47
ARHGDIA-213ENST00000583499 CEP170BQ9Y4F5 1589 aaPredicted RBP36.73■■■■□ 3.47
ARHGDIA-213ENST00000583499 STRCQ7RTU9 1775 aa36.72■■■■□ 3.47
ARHGDIA-213ENST00000583499 IQGAP3Q86VI3 1631 aa36.71■■■■□ 3.47
ARHGDIA-213ENST00000583499 ERVK-7P63135 1459 aa36.7■■■■□ 3.47
ARHGDIA-213ENST00000583499 HSPA2P54652 639 aa36.69■■■■□ 3.46
ARHGDIA-213ENST00000583499 TET3O43151 1660 aa36.69■■■■□ 3.46
ARHGDIA-213ENST00000583499 NAIPQ13075 1403 aa36.68■■■■□ 3.46
ARHGDIA-213ENST00000583499 FBXO31Q5XUX0 539 aaPredicted RBP36.67■■■■□ 3.46
ARHGDIA-213ENST00000583499 ARHGAP31Q2M1Z3 1444 aa36.64■■■■□ 3.46
ARHGDIA-213ENST00000583499 E9PCH4 1651 aa36.62■■■■□ 3.45
ARHGDIA-213ENST00000583499 GRWD1Q9BQ67 446 aaKnown RBP eCLIP36.61■■■■□ 3.451e-6■■■□□ 17.8
ARHGDIA-213ENST00000583499 SYNMO15061 1565 aa36.61■■■■□ 3.45
ARHGDIA-213ENST00000583499 HFM1A2PYH4 1435 aa36.6■■■■□ 3.45
ARHGDIA-213ENST00000583499 TNRQ92752 1358 aa36.6■■■■□ 3.45
ARHGDIA-213ENST00000583499 A2ML1A8K2U0 1454 aa36.56■■■■□ 3.44
ARHGDIA-213ENST00000583499 KANK1Q14678 1352 aa36.54■■■■□ 3.44
ARHGDIA-213ENST00000583499 UBR1Q8IWV7 1749 aa36.52■■■■□ 3.44
ARHGDIA-213ENST00000583499 PIK3C2BO00750 1634 aa36.49■■■■□ 3.43
ARHGDIA-213ENST00000583499 NLRP1Q9C000 1473 aa36.49■■■■□ 3.43
ARHGDIA-213ENST00000583499 POLR1AO95602 1720 aaPredicted RBP36.47■■■■□ 3.43
ARHGDIA-213ENST00000583499 NOS1P29475 1434 aa36.46■■■■□ 3.43
ARHGDIA-213ENST00000583499 RPRD2Q5VT52 1461 aaKnown RBP36.43■■■■□ 3.42
ARHGDIA-213ENST00000583499 NEURL4Q96JN8 1562 aa36.42■■■■□ 3.42
ARHGDIA-213ENST00000583499 PLA2R1Q13018 1463 aa36.42■■■■□ 3.42
ARHGDIA-213ENST00000583499 UGGT1Q9NYU2 1555 aa36.41■■■■□ 3.42
ARHGDIA-213ENST00000583499 MYO5BQ9ULV0 1848 aa36.4■■■■□ 3.42
ARHGDIA-213ENST00000583499 SPHKAPQ2M3C7 1700 aa36.38■■■■□ 3.41
ARHGDIA-213ENST00000583499 NUP155O75694 1391 aa36.38■■■■□ 3.41
ARHGDIA-213ENST00000583499 KDM5AP29375 1690 aaKnown RBP36.35■■■■□ 3.41
ARHGDIA-213ENST00000583499 ADGRB3O60242 1522 aa36.31■■■■□ 3.4
ARHGDIA-213ENST00000583499 TMEM131LA2VDJ0 1609 aa36.24■■■■□ 3.39
ARHGDIA-213ENST00000583499 ARHGAP23Q9P227 1491 aa36.24■■■■□ 3.39
ARHGDIA-213ENST00000583499 SLIT1O75093 1534 aa36.23■■■■□ 3.39
ARHGDIA-213ENST00000583499 NCKAP5LQ9HCH0 1330 aa36.22■■■■□ 3.39
ARHGDIA-213ENST00000583499 PTPRTO14522 1441 aa36.21■■■■□ 3.39
ARHGDIA-213ENST00000583499 CLTCL1P53675 1640 aa36.21■■■■□ 3.39
ARHGDIA-213ENST00000583499 TRPM2O94759 1503 aa36.18■■■■□ 3.38
ARHGDIA-213ENST00000583499 IQGAP1P46940 1657 aa36.17■■■■□ 3.38
ARHGDIA-213ENST00000583499 SETD5Q9C0A6 1442 aa36.17■■■■□ 3.38
ARHGDIA-213ENST00000583499 IDI1Q13907 227 aa36.16■■■■□ 3.38
ARHGDIA-213ENST00000583499 RAB3GAP2Q9H2M9 1393 aa36.13■■■■□ 3.37
ARHGDIA-213ENST00000583499 MED14O60244 1454 aa36.11■■■■□ 3.37
ARHGDIA-213ENST00000583499 LTBP4Q8N2S1 1624 aa36.08■■■■□ 3.37
ARHGDIA-213ENST00000583499 SCAF11Q99590 1463 aaKnown RBP36.07■■■■□ 3.37
ARHGDIA-213ENST00000583499 PKD2Q13563 968 aa36.05■■■■□ 3.36
ARHGDIA-213ENST00000583499 THEMISQ8N1K5 641 aaPredicted RBP36.05■■■■□ 3.36
ARHGDIA-213ENST00000583499 TRIM52Q96A61 297 aa36.05■■■■□ 3.36
ARHGDIA-213ENST00000583499 TMEM2Q9UHN6 1383 aa36.04■■■■□ 3.36
ARHGDIA-213ENST00000583499 ZFYVE9O95405 1425 aa36.04■■■■□ 3.36
ARHGDIA-213ENST00000583499 STRCP1A6NGW2 1772 aa36.03■■■■□ 3.36
ARHGDIA-213ENST00000583499 NPHP4O75161 1426 aaPredicted RBP36.02■■■■□ 3.36
ARHGDIA-213ENST00000583499 KIF1BO60333 1816 aa36.01■■■■□ 3.35
ARHGDIA-213ENST00000583499 SLC52A1Q9NWF4 448 aa36■■■■□ 3.35
ARHGDIA-213ENST00000583499 LTKP29376 864 aa35.99■■■■□ 3.35
ARHGDIA-213ENST00000583499 FOXD1Q16676 465 aa35.95■■■■□ 3.35
ARHGDIA-213ENST00000583499 SLC4A1APQ9BWU0 796 aaKnown RBP35.95■■■■□ 3.35
ARHGDIA-213ENST00000583499 DMRT2Q9Y5R5 561 aa35.94■■■■□ 3.34
ARHGDIA-213ENST00000583499 ANKLE2Q86XL3 938 aa35.93■■■■□ 3.34
ARHGDIA-213ENST00000583499 ZNF335Q9H4Z2 1342 aaPredicted RBP35.9■■■■□ 3.34
ARHGDIA-213ENST00000583499 RIMS2Q9UQ26 1411 aa35.9■■■■□ 3.34
ARHGDIA-213ENST00000583499 NEXMIFQ5QGS0 1516 aa35.89■■■■□ 3.34
ARHGDIA-213ENST00000583499 NRXN3Q9Y4C0 1643 aa35.88■■■■□ 3.33
ARHGDIA-213ENST00000583499 MPHOSPH9Q99550 1183 aa35.88■■■■□ 3.33
ARHGDIA-213ENST00000583499 STAG3Q9UJ98 1225 aa35.86■■■■□ 3.33
ARHGDIA-213ENST00000583499 PPLO60437 1756 aa35.84■■■■□ 3.33
Retrieved 100 of 20,778 RNA–protein pairs in 56 ms