RNA–Protein interactions for RNA: ENST00000583463.5

SPECC1-220, Transcript of sperm antigen with calponin homology and coiled-coil domains 1, humanhuman

TSL 4

Gene SPECC1, Length 581 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPECC1-220ENST00000583463 SCAF1Q9H7N4 1312 aaKnown RBP24.23■■□□□ 1.47
SPECC1-220ENST00000583463 KIAA1107Q9UPP5 1409 aa24.22■■□□□ 1.47
SPECC1-220ENST00000583463 FBXO31Q5XUX0 539 aaPredicted RBP24.22■■□□□ 1.47
SPECC1-220ENST00000583463 A2ML1A8K2U0 1454 aa24.21■■□□□ 1.47
SPECC1-220ENST00000583463 LRRC9Q6ZRR7 1453 aa24.21■■□□□ 1.47
SPECC1-220ENST00000583463 MTUS2Q5JR59 1369 aa24.21■■□□□ 1.47
SPECC1-220ENST00000583463 CCNB3Q8WWL7 1395 aa24.19■■□□□ 1.46
SPECC1-220ENST00000583463 ALKQ9UM73 1620 aa24.19■■□□□ 1.46
SPECC1-220ENST00000583463 MBD5Q9P267 1494 aa24.17■■□□□ 1.46
SPECC1-220ENST00000583463 PLEKHH2Q8IVE3 1493 aa24.16■■□□□ 1.46
SPECC1-220ENST00000583463 STRCP1A6NGW2 1772 aa24.15■■□□□ 1.46
SPECC1-220ENST00000583463 SENP3Q9H4L4 574 aaPredicted RBP24.14■■□□□ 1.45
SPECC1-220ENST00000583463 VWDEQ8N2E2 1590 aa24.13■■□□□ 1.45
SPECC1-220ENST00000583463 SHANK2Q9UPX8 1470 aa24.13■■□□□ 1.45
SPECC1-220ENST00000583463 KANK4Q5T7N3 995 aaPredicted RBP24.12■■□□□ 1.45
SPECC1-220ENST00000583463 TNRQ92752 1358 aa24.1■■□□□ 1.45
SPECC1-220ENST00000583463 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP24.1■■□□□ 1.45
SPECC1-220ENST00000583463 KIF3BO15066 747 aa24.08■■□□□ 1.45
SPECC1-220ENST00000583463 CPS1P31327 1500 aa24.08■■□□□ 1.45
SPECC1-220ENST00000583463 DHX29Q7Z478 1369 aaKnown RBP24.07■■□□□ 1.44
SPECC1-220ENST00000583463 NCOA2Q15596 1464 aa24.07■■□□□ 1.44
SPECC1-220ENST00000583463 PZPP20742 1482 aa24.06■■□□□ 1.44
SPECC1-220ENST00000583463 KDM5DQ9BY66 1539 aa24.04■■□□□ 1.44
SPECC1-220ENST00000583463 CFAP65Q6ZU64 1925 aaKnown RBP24.04■■□□□ 1.44
SPECC1-220ENST00000583463 TOM1O60784 492 aa24.03■■□□□ 1.44
SPECC1-220ENST00000583463 RTEL1-TNFRSF6BF6WH68 1400 aa24.02■■□□□ 1.44
SPECC1-220ENST00000583463 IQGAP1P46940 1657 aa24.01■■□□□ 1.43
SPECC1-220ENST00000583463 UGGT1Q9NYU2 1555 aa23.99■■□□□ 1.43
SPECC1-220ENST00000583463 NPHP4O75161 1426 aaPredicted RBP23.99■■□□□ 1.43
SPECC1-220ENST00000583463 ANKLE2Q86XL3 938 aa23.98■■□□□ 1.43
SPECC1-220ENST00000583463 CAMSAP2Q08AD1 1489 aa23.98■■□□□ 1.43
SPECC1-220ENST00000583463 DEPDC5O75140 1603 aa23.98■■□□□ 1.43
SPECC1-220ENST00000583463 MIA2Q96PC5 1412 aa23.97■■□□□ 1.43
SPECC1-220ENST00000583463 WASHC2CQ9Y4E1 1318 aa23.97■■□□□ 1.43
SPECC1-220ENST00000583463 CCDC141Q6ZP82 1450 aa23.96■■□□□ 1.43
SPECC1-220ENST00000583463 MED14O60244 1454 aa23.95■■□□□ 1.42
SPECC1-220ENST00000583463 PPARGC1BQ86YN6 1023 aaKnown RBP23.95■■□□□ 1.42
SPECC1-220ENST00000583463 LRRC7Q96NW7 1537 aa23.94■■□□□ 1.42
SPECC1-220ENST00000583463 XIRP1Q702N8 1843 aaKnown RBP23.94■■□□□ 1.42
SPECC1-220ENST00000583463 ZC3H13Q5T200 1668 aaKnown RBP23.93■■□□□ 1.42
SPECC1-220ENST00000583463 PHF23Q9BUL5 403 aaPredicted RBP23.93■■□□□ 1.42
SPECC1-220ENST00000583463 MYOM3Q5VTT5 1437 aa23.93■■□□□ 1.42
SPECC1-220ENST00000583463 CEP152O94986 1710 aa23.92■■□□□ 1.42
SPECC1-220ENST00000583463 THEMISQ8N1K5 641 aaPredicted RBP23.91■■□□□ 1.42
SPECC1-220ENST00000583463 NLRP1Q9C000 1473 aa23.91■■□□□ 1.42
SPECC1-220ENST00000583463 FAM135AQ9P2D6 1515 aa23.9■■□□□ 1.42
SPECC1-220ENST00000583463 ABCC3O15438 1527 aa23.89■■□□□ 1.41
SPECC1-220ENST00000583463 RNF17Q9BXT8 1623 aaKnown RBP23.88■■□□□ 1.41
SPECC1-220ENST00000583463 RGS17Q9UGC6 210 aaPredicted RBP23.88■■□□□ 1.41
SPECC1-220ENST00000583463 UBR1Q8IWV7 1749 aa23.87■■□□□ 1.41
SPECC1-220ENST00000583463 MROH1Q8NDA8 1641 aa23.87■■□□□ 1.41
SPECC1-220ENST00000583463 ARHGEF5Q12774 1597 aa23.85■■□□□ 1.41
SPECC1-220ENST00000583463 FGD6Q6ZV73 1430 aa23.84■■□□□ 1.41
SPECC1-220ENST00000583463 SYNMO15061 1565 aa23.84■■□□□ 1.41
SPECC1-220ENST00000583463 ERVK-7P63135 1459 aa23.84■■□□□ 1.41
SPECC1-220ENST00000583463 PTPN23Q9H3S7 1636 aa23.8■■□□□ 1.4
SPECC1-220ENST00000583463 LTKP29376 864 aa23.79■■□□□ 1.4
SPECC1-220ENST00000583463 MAST1Q9Y2H9 1570 aa23.75■■□□□ 1.39
SPECC1-220ENST00000583463 RRBP1Q9P2E9 1410 aaKnown RBP23.75■■□□□ 1.39
SPECC1-220ENST00000583463 EIF2AK4Q9P2K8 1649 aaKnown RBP23.74■■□□□ 1.39
SPECC1-220ENST00000583463 SCAF11Q99590 1463 aaKnown RBP23.74■■□□□ 1.39
SPECC1-220ENST00000583463 TSPY4P0CV99 314 aa23.73■■□□□ 1.39
SPECC1-220ENST00000583463 TSPY10P0CW01 314 aa23.73■■□□□ 1.39
SPECC1-220ENST00000583463 RSPH4AQ5TD94 716 aa23.72■■□□□ 1.39
SPECC1-220ENST00000583463 PIK3C2BO00750 1634 aa23.71■■□□□ 1.39
SPECC1-220ENST00000583463 RBM33Q96EV2 1170 aaKnown RBP23.71■■□□□ 1.39
SPECC1-220ENST00000583463 ARHGAP23Q9P227 1491 aa23.7■■□□□ 1.38
SPECC1-220ENST00000583463 SETD1AO15047 1707 aaKnown RBP23.7■■□□□ 1.38
SPECC1-220ENST00000583463 POTEAQ6S8J7 498 aa23.69■■□□□ 1.38
SPECC1-220ENST00000583463 TXNDC2Q86VQ3 553 aa23.69■■□□□ 1.38
SPECC1-220ENST00000583463 SLIT1O75093 1534 aa23.68■■□□□ 1.38
SPECC1-220ENST00000583463 ROBO1Q9Y6N7 1651 aa23.65■■□□□ 1.38
SPECC1-220ENST00000583463 FAM50AQ14320 339 aaKnown RBP23.64■■□□□ 1.37
SPECC1-220ENST00000583463 CROCC2H7BZ55 1655 aa23.62■■□□□ 1.37
SPECC1-220ENST00000583463 PRDM15P57071 1507 aaPredicted RBP23.6■■□□□ 1.37
SPECC1-220ENST00000583463 DUOX2Q9NRD8 1548 aa23.6■■□□□ 1.37
SPECC1-220ENST00000583463 TMEM94Q12767 1356 aa23.59■■□□□ 1.37
SPECC1-220ENST00000583463 DAPK1P53355 1430 aa23.59■■□□□ 1.37
SPECC1-220ENST00000583463 GRWD1Q9BQ67 446 aaKnown RBP eCLIP23.58■■□□□ 1.37
SPECC1-220ENST00000583463 FAM135BQ49AJ0 1406 aa23.57■■□□□ 1.36
SPECC1-220ENST00000583463 SLC26A8Q96RN1 970 aa23.56■■□□□ 1.36
SPECC1-220ENST00000583463 RRP7BPQ9NSQ0 103 aa23.56■■□□□ 1.36
SPECC1-220ENST00000583463 ABCC5O15440 1437 aa23.56■■□□□ 1.36
SPECC1-220ENST00000583463 TMEM2Q9UHN6 1383 aa23.55■■□□□ 1.36
SPECC1-220ENST00000583463 TET3O43151 1660 aa23.55■■□□□ 1.36
SPECC1-220ENST00000583463 ARHGAP31Q2M1Z3 1444 aa23.54■■□□□ 1.36
SPECC1-220ENST00000583463 MYO5BQ9ULV0 1848 aa23.54■■□□□ 1.36
SPECC1-220ENST00000583463 KIF15Q9NS87 1388 aa23.53■■□□□ 1.36
SPECC1-220ENST00000583463 EID1Q9Y6B2 187 aa23.52■■□□□ 1.36
SPECC1-220ENST00000583463 PHLPP1O60346 1717 aa23.51■■□□□ 1.35
SPECC1-220ENST00000583463 EFCAB6Q5THR3 1501 aa23.51■■□□□ 1.35
SPECC1-220ENST00000583463 IDI1Q13907 227 aa23.51■■□□□ 1.35
SPECC1-220ENST00000583463 PROSER2Q86WR7 435 aaPredicted RBP23.49■■□□□ 1.35
SPECC1-220ENST00000583463 KCNA6P17658 529 aa23.48■■□□□ 1.35
SPECC1-220ENST00000583463 STAG3Q9UJ98 1225 aa23.47■■□□□ 1.35
SPECC1-220ENST00000583463 ERBINQ96RT1 1412 aa23.47■■□□□ 1.35
SPECC1-220ENST00000583463 NWD1Q149M9 1564 aa23.47■■□□□ 1.35
SPECC1-220ENST00000583463 KDM5AP29375 1690 aaKnown RBP23.47■■□□□ 1.35
SPECC1-220ENST00000583463 ADGRL2O95490 1459 aa23.46■■□□□ 1.35
SPECC1-220ENST00000583463 ITGAEP38570 1179 aa23.44■■□□□ 1.34
Retrieved 100 of 20,778 RNA–protein pairs in 68.6 ms