RNA–Protein interactions for RNA: ENST00000581642.1

SLC16A3-212, Transcript of solute carrier family 16 member 3, humanhuman

TSL 4

Gene SLC16A3, Length 557 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLC16A3-212ENST00000581642 TCOF1Q13428 1488 aaKnown RBP28.3■■■□□ 2.12
SLC16A3-212ENST00000581642 KIF3BO15066 747 aa28.3■■■□□ 2.12
SLC16A3-212ENST00000581642 ZNF142P52746 1687 aaPredicted RBP28.29■■■□□ 2.12
SLC16A3-212ENST00000581642 PPP6R1Q9UPN7 881 aa28.29■■■□□ 2.12
SLC16A3-212ENST00000581642 LTBP4Q8N2S1 1624 aa28.29■■■□□ 2.12
SLC16A3-212ENST00000581642 DNMT1P26358 1616 aaKnown RBP28.28■■■□□ 2.12
SLC16A3-212ENST00000581642 CEP170BQ9Y4F5 1589 aaPredicted RBP28.28■■■□□ 2.12
SLC16A3-212ENST00000581642 SHANK2Q9UPX8 1470 aa28.26■■■□□ 2.11
SLC16A3-212ENST00000581642 FBXO31Q5XUX0 539 aaPredicted RBP28.23■■■□□ 2.11
SLC16A3-212ENST00000581642 TSPY4P0CV99 314 aa28.22■■■□□ 2.11
SLC16A3-212ENST00000581642 TSPY10P0CW01 314 aa28.22■■■□□ 2.11
SLC16A3-212ENST00000581642 FAM135AQ9P2D6 1515 aa28.21■■■□□ 2.11
SLC16A3-212ENST00000581642 EIF2AK4Q9P2K8 1649 aaKnown RBP28.21■■■□□ 2.11
SLC16A3-212ENST00000581642 PLA2R1Q13018 1463 aa28.19■■■□□ 2.1
SLC16A3-212ENST00000581642 ZNF335Q9H4Z2 1342 aaPredicted RBP28.18■■■□□ 2.1
SLC16A3-212ENST00000581642 ABCC5O15440 1437 aa28.18■■■□□ 2.1
SLC16A3-212ENST00000581642 RNF17Q9BXT8 1623 aaKnown RBP28.18■■■□□ 2.1
SLC16A3-212ENST00000581642 KDM5DQ9BY66 1539 aa28.18■■■□□ 2.1
SLC16A3-212ENST00000581642 DAPK1P53355 1430 aa28.18■■■□□ 2.1
SLC16A3-212ENST00000581642 WASHC2CQ9Y4E1 1318 aa28.18■■■□□ 2.1
SLC16A3-212ENST00000581642 A2ML1A8K2U0 1454 aa28.17■■■□□ 2.1
SLC16A3-212ENST00000581642 PKD2Q13563 968 aa28.17■■■□□ 2.1
SLC16A3-212ENST00000581642 TNRQ92752 1358 aa28.14■■■□□ 2.1
SLC16A3-212ENST00000581642 DUOX2Q9NRD8 1548 aa28.13■■■□□ 2.09
SLC16A3-212ENST00000581642 PZPP20742 1482 aa28.13■■■□□ 2.09
SLC16A3-212ENST00000581642 ZC3H13Q5T200 1668 aaKnown RBP28.09■■■□□ 2.09
SLC16A3-212ENST00000581642 IQSEC2Q5JU85 1478 aa28.08■■■□□ 2.09
SLC16A3-212ENST00000581642 MROH1Q8NDA8 1641 aa28.08■■■□□ 2.09
SLC16A3-212ENST00000581642 KIF15Q9NS87 1388 aa28.06■■■□□ 2.08
SLC16A3-212ENST00000581642 POLR1AO95602 1720 aaPredicted RBP28.04■■■□□ 2.08
SLC16A3-212ENST00000581642 ERBINQ96RT1 1412 aa28.04■■■□□ 2.08
SLC16A3-212ENST00000581642 ADGRL2O95490 1459 aa28.03■■■□□ 2.08
SLC16A3-212ENST00000581642 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP28.02■■■□□ 2.082e-9■□□□□ 10.2
SLC16A3-212ENST00000581642 NEURL4Q96JN8 1562 aa28.02■■■□□ 2.08
SLC16A3-212ENST00000581642 DEPDC5O75140 1603 aa28.01■■■□□ 2.07
SLC16A3-212ENST00000581642 ABCC3O15438 1527 aa28.01■■■□□ 2.07
SLC16A3-212ENST00000581642 PRDM15P57071 1507 aaPredicted RBP28.01■■■□□ 2.07
SLC16A3-212ENST00000581642 DISP3Q9P2K9 1392 aa28■■■□□ 2.07
SLC16A3-212ENST00000581642 CEP152O94986 1710 aa27.99■■■□□ 2.07
SLC16A3-212ENST00000581642 UBAP1LF5GYI3 381 aa27.99■■■□□ 2.07
SLC16A3-212ENST00000581642 ANKRD30AQ9BXX3 1397 aa27.99■■■□□ 2.07
SLC16A3-212ENST00000581642 UGGT1Q9NYU2 1555 aa27.98■■■□□ 2.07
SLC16A3-212ENST00000581642 NLRP1Q9C000 1473 aa27.96■■■□□ 2.07
SLC16A3-212ENST00000581642 FAM50AQ14320 339 aaKnown RBP27.96■■■□□ 2.07
SLC16A3-212ENST00000581642 CFAP65Q6ZU64 1925 aaKnown RBP27.95■■■□□ 2.06
SLC16A3-212ENST00000581642 ANKLE2Q86XL3 938 aa27.95■■■□□ 2.06
SLC16A3-212ENST00000581642 THEMISQ8N1K5 641 aaPredicted RBP27.95■■■□□ 2.06
SLC16A3-212ENST00000581642 SPATA31D1Q6ZQQ2 1576 aa27.92■■■□□ 2.06
SLC16A3-212ENST00000581642 RRP7BPQ9NSQ0 103 aa27.92■■■□□ 2.06
SLC16A3-212ENST00000581642 ERVK-7P63135 1459 aa27.91■■■□□ 2.06
SLC16A3-212ENST00000581642 ILDR2Q71H61 639 aa27.9■■■□□ 2.06
SLC16A3-212ENST00000581642 CHIC2Q9UKJ5 165 aa27.89■■■□□ 2.06
SLC16A3-212ENST00000581642 NPHP4O75161 1426 aaPredicted RBP27.88■■■□□ 2.05
SLC16A3-212ENST00000581642 PPARGC1BQ86YN6 1023 aaKnown RBP27.87■■■□□ 2.05
SLC16A3-212ENST00000581642 GRWD1Q9BQ67 446 aaKnown RBP eCLIP27.86■■■□□ 2.05
SLC16A3-212ENST00000581642 VWDEQ8N2E2 1590 aa27.86■■■□□ 2.05
SLC16A3-212ENST00000581642 RRBP1Q9P2E9 1410 aaKnown RBP27.84■■■□□ 2.05
SLC16A3-212ENST00000581642 MED14O60244 1454 aa27.83■■■□□ 2.05
SLC16A3-212ENST00000581642 CPS1P31327 1500 aa27.83■■■□□ 2.05
SLC16A3-212ENST00000581642 SCAF1Q9H7N4 1312 aaKnown RBP27.83■■■□□ 2.05
SLC16A3-212ENST00000581642 IQGAP1P46940 1657 aa27.82■■■□□ 2.04
SLC16A3-212ENST00000581642 ROCK1Q13464 1354 aa27.82■■■□□ 2.04
SLC16A3-212ENST00000581642 PIP4K2BP78356 416 aa27.81■■■□□ 2.04
SLC16A3-212ENST00000581642 ANKRD50Q9ULJ7 1429 aa27.81■■■□□ 2.04
SLC16A3-212ENST00000581642 LMTK2Q8IWU2 1503 aa27.81■■■□□ 2.04
SLC16A3-212ENST00000581642 UBR1Q8IWV7 1749 aa27.81■■■□□ 2.04
SLC16A3-212ENST00000581642 UNC13BO14795 1591 aa27.78■■■□□ 2.04
SLC16A3-212ENST00000581642 ARHGAP31Q2M1Z3 1444 aa27.78■■■□□ 2.04
SLC16A3-212ENST00000581642 KANK1Q14678 1352 aa27.76■■■□□ 2.03
SLC16A3-212ENST00000581642 STRCP1A6NGW2 1772 aa27.76■■■□□ 2.03
SLC16A3-212ENST00000581642 EFCAB6Q5THR3 1501 aa27.74■■■□□ 2.03
SLC16A3-212ENST00000581642 TOM1O60784 492 aa27.73■■■□□ 2.03
SLC16A3-212ENST00000581642 LTKP29376 864 aa27.71■■■□□ 2.03
SLC16A3-212ENST00000581642 HSPA1LP34931 641 aa27.71■■■□□ 2.03
SLC16A3-212ENST00000581642 PIK3C2BO00750 1634 aa27.7■■■□□ 2.02
SLC16A3-212ENST00000581642 TET3O43151 1660 aa27.69■■■□□ 2.02
SLC16A3-212ENST00000581642 SCAF11Q99590 1463 aaKnown RBP27.69■■■□□ 2.02
SLC16A3-212ENST00000581642 GCC2Q8IWJ2 1684 aa27.68■■■□□ 2.02
SLC16A3-212ENST00000581642 TXNDC2Q86VQ3 553 aa27.68■■■□□ 2.02
SLC16A3-212ENST00000581642 ARHGAP23Q9P227 1491 aa27.66■■■□□ 2.02
SLC16A3-212ENST00000581642 ALKQ9UM73 1620 aa27.66■■■□□ 2.02
SLC16A3-212ENST00000581642 SLIT1O75093 1534 aa27.66■■■□□ 2.02
SLC16A3-212ENST00000581642 LRRC7Q96NW7 1537 aa27.66■■■□□ 2.02
SLC16A3-212ENST00000581642 IQGAP3Q86VI3 1631 aa27.65■■■□□ 2.02
SLC16A3-212ENST00000581642 SOCS7O14512 581 aa27.64■■■□□ 2.02
SLC16A3-212ENST00000581642 ITGAEP38570 1179 aa27.63■■■□□ 2.01
SLC16A3-212ENST00000581642 SENP3Q9H4L4 574 aaPredicted RBP27.63■■■□□ 2.01
SLC16A3-212ENST00000581642 STAG3Q9UJ98 1225 aa27.63■■■□□ 2.01
SLC16A3-212ENST00000581642 RPRD2Q5VT52 1461 aaKnown RBP27.62■■■□□ 2.01
SLC16A3-212ENST00000581642 SYNMO15061 1565 aa27.61■■■□□ 2.01
SLC16A3-212ENST00000581642 IDI1Q13907 227 aa27.61■■■□□ 2.01
SLC16A3-212ENST00000581642 EID1Q9Y6B2 187 aa27.6■■■□□ 2.01
SLC16A3-212ENST00000581642 KDM5AP29375 1690 aaKnown RBP27.59■■■□□ 2.01
SLC16A3-212ENST00000581642 TMEM2Q9UHN6 1383 aa27.58■■■□□ 2.01
SLC16A3-212ENST00000581642 NOS1P29475 1434 aa27.58■■■□□ 2
SLC16A3-212ENST00000581642 E9PCH4 1651 aa27.56■■■□□ 2
SLC16A3-212ENST00000581642 MED1Q15648 1581 aaPredicted RBP27.52■■■□□ 2
SLC16A3-212ENST00000581642 NAIPQ13075 1403 aa27.52■■■□□ 2
SLC16A3-212ENST00000581642 XIRP1Q702N8 1843 aaKnown RBP27.52■■■□□ 2
SLC16A3-212ENST00000581642 HFM1A2PYH4 1435 aa27.5■■□□□ 1.99
Retrieved 100 of 20,778 RNA–protein pairs in 131.8 ms