RNA–Protein interactions for RNA: ENST00000580539.2

RN7SL716P-201, Transcript of RNA, 7SL, cytoplasmic 716, pseudogene, humanhuman

BASIC

Gene RN7SL716P, Length 268 nt, Biotype misc RNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RN7SL716P-201ENST00000580539 PREX2Q70Z35 1606 aa15.61■□□□□ 0.09
RN7SL716P-201ENST00000580539 CCNB3Q8WWL7 1395 aa15.61■□□□□ 0.09
RN7SL716P-201ENST00000580539 FBXO31Q5XUX0 539 aaPredicted RBP15.6■□□□□ 0.09
RN7SL716P-201ENST00000580539 SAMD9LQ8IVG5 1584 aa15.6■□□□□ 0.09
RN7SL716P-201ENST00000580539 SYCP2Q9BX26 1530 aa15.59■□□□□ 0.09
RN7SL716P-201ENST00000580539 ITSN2Q9NZM3 1697 aa15.59■□□□□ 0.09
RN7SL716P-201ENST00000580539 PIP4K2BP78356 416 aa15.58■□□□□ 0.08
RN7SL716P-201ENST00000580539 PKD2Q13563 968 aa15.58■□□□□ 0.08
RN7SL716P-201ENST00000580539 SUPT6HQ7KZ85 1726 aaKnown RBP15.57■□□□□ 0.08
RN7SL716P-201ENST00000580539 MTUS2Q5JR59 1369 aa15.56■□□□□ 0.08
RN7SL716P-201ENST00000580539 NPATQ14207 1427 aa15.56■□□□□ 0.08
RN7SL716P-201ENST00000580539 A2MP01023 1474 aa15.56■□□□□ 0.08
RN7SL716P-201ENST00000580539 CDC42BPAQ5VT25 1732 aa15.56■□□□□ 0.08
RN7SL716P-201ENST00000580539 KIF3BO15066 747 aa15.55■□□□□ 0.08
RN7SL716P-201ENST00000580539 PTPRKQ15262 1439 aa15.54■□□□□ 0.08
RN7SL716P-201ENST00000580539 FYCO1Q9BQS8 1478 aa15.53■□□□□ 0.08
RN7SL716P-201ENST00000580539 KIAA1107Q9UPP5 1409 aa15.53■□□□□ 0.08
RN7SL716P-201ENST00000580539 CHRDL2Q6WN34 429 aa15.52■□□□□ 0.08
RN7SL716P-201ENST00000580539 ATP7AQ04656 1500 aa15.52■□□□□ 0.07
RN7SL716P-201ENST00000580539 HSPA1LP34931 641 aa15.51■□□□□ 0.07
RN7SL716P-201ENST00000580539 CLTCQ00610 1675 aaKnown RBP15.51■□□□□ 0.07
RN7SL716P-201ENST00000580539 SPATA31D1Q6ZQQ2 1576 aa15.5■□□□□ 0.07
RN7SL716P-201ENST00000580539 WASHC2CQ9Y4E1 1318 aa15.5■□□□□ 0.07
RN7SL716P-201ENST00000580539 PLEKHH2Q8IVE3 1493 aa15.48■□□□□ 0.07
RN7SL716P-201ENST00000580539 DHX29Q7Z478 1369 aaKnown RBP15.48■□□□□ 0.07
RN7SL716P-201ENST00000580539 IQSEC2Q5JU85 1478 aa15.47■□□□□ 0.07
RN7SL716P-201ENST00000580539 ANKLE2Q86XL3 938 aa15.47■□□□□ 0.07
RN7SL716P-201ENST00000580539 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP15.47■□□□□ 0.07
RN7SL716P-201ENST00000580539 TOM1O60784 492 aa15.46■□□□□ 0.07
RN7SL716P-201ENST00000580539 TCOF1Q13428 1488 aaKnown RBP15.46■□□□□ 0.06
RN7SL716P-201ENST00000580539 MBD5Q9P267 1494 aa15.46■□□□□ 0.06
RN7SL716P-201ENST00000580539 ZBTB22O15209 634 aa15.45■□□□□ 0.06
RN7SL716P-201ENST00000580539 PLA2R1Q13018 1463 aa15.45■□□□□ 0.06
RN7SL716P-201ENST00000580539 CEP170BQ9Y4F5 1589 aaPredicted RBP15.45■□□□□ 0.06
RN7SL716P-201ENST00000580539 TNRQ92752 1358 aa15.44■□□□□ 0.06
RN7SL716P-201ENST00000580539 MROH2AA6NES4 1674 aa15.44■□□□□ 0.06
RN7SL716P-201ENST00000580539 TSPY4P0CV99 314 aa15.43■□□□□ 0.06
RN7SL716P-201ENST00000580539 TSPY10P0CW01 314 aa15.43■□□□□ 0.06
RN7SL716P-201ENST00000580539 THEMISQ8N1K5 641 aaPredicted RBP15.43■□□□□ 0.06
RN7SL716P-201ENST00000580539 PLXNC1O60486 1568 aa15.43■□□□□ 0.06
RN7SL716P-201ENST00000580539 INO80Q9ULG1 1556 aaPredicted RBP15.43■□□□□ 0.06
RN7SL716P-201ENST00000580539 MYO3AQ8NEV4 1616 aa15.43■□□□□ 0.06
RN7SL716P-201ENST00000580539 A2ML1A8K2U0 1454 aa15.42■□□□□ 0.06
RN7SL716P-201ENST00000580539 RTEL1-TNFRSF6BF6WH68 1400 aa15.4■□□□□ 0.06
RN7SL716P-201ENST00000580539 DNMT1P26358 1616 aaKnown RBP15.39■□□□□ 0.05
RN7SL716P-201ENST00000580539 RSPH4AQ5TD94 716 aa15.39■□□□□ 0.05
RN7SL716P-201ENST00000580539 TIAM1Q13009 1591 aa15.38■□□□□ 0.05
RN7SL716P-201ENST00000580539 MIA2Q96PC5 1412 aa15.38■□□□□ 0.05
RN7SL716P-201ENST00000580539 SHANK2Q9UPX8 1470 aa15.38■□□□□ 0.05
RN7SL716P-201ENST00000580539 LOC105371045A0A1W2PR82 267 aa15.37■□□□□ 0.05
RN7SL716P-201ENST00000580539 CEP162Q5TB80 1403 aa15.36■□□□□ 0.05
RN7SL716P-201ENST00000580539 ZBTB12Q9Y330 459 aaPredicted RBP15.35■□□□□ 0.05
RN7SL716P-201ENST00000580539 NCOA2Q15596 1464 aa15.34■□□□□ 0.05
RN7SL716P-201ENST00000580539 KANK4Q5T7N3 995 aaPredicted RBP15.34■□□□□ 0.05
RN7SL716P-201ENST00000580539 AKT1S1Q96B36 256 aa15.34■□□□□ 0.05
RN7SL716P-201ENST00000580539 ZNF142P52746 1687 aaPredicted RBP15.34■□□□□ 0.05
RN7SL716P-201ENST00000580539 ADGBQ8N7X0 1667 aa15.34■□□□□ 0.05
RN7SL716P-201ENST00000580539 CCDC141Q6ZP82 1450 aa15.33■□□□□ 0.05
RN7SL716P-201ENST00000580539 NPHP4O75161 1426 aaPredicted RBP15.33■□□□□ 0.04
RN7SL716P-201ENST00000580539 PZPP20742 1482 aa15.33■□□□□ 0.04
RN7SL716P-201ENST00000580539 CAMSAP2Q08AD1 1489 aa15.33■□□□□ 0.04
RN7SL716P-201ENST00000580539 EHBP1L1Q8N3D4 1523 aa15.33■□□□□ 0.04
RN7SL716P-201ENST00000580539 LTKP29376 864 aa15.3■□□□□ 0.04
RN7SL716P-201ENST00000580539 TXNDC2Q86VQ3 553 aa15.3■□□□□ 0.04
RN7SL716P-201ENST00000580539 NEURL4Q96JN8 1562 aa15.3■□□□□ 0.04
RN7SL716P-201ENST00000580539 UGGT1Q9NYU2 1555 aa15.3■□□□□ 0.04
RN7SL716P-201ENST00000580539 FAM135AQ9P2D6 1515 aa15.3■□□□□ 0.04
RN7SL716P-201ENST00000580539 CPS1P31327 1500 aa15.29■□□□□ 0.04
RN7SL716P-201ENST00000580539 KDM5DQ9BY66 1539 aa15.29■□□□□ 0.04
RN7SL716P-201ENST00000580539 RRP7BPQ9NSQ0 103 aa15.28■□□□□ 0.04
RN7SL716P-201ENST00000580539 RBM33Q96EV2 1170 aaKnown RBP15.27■□□□□ 0.04
RN7SL716P-201ENST00000580539 NLRP1Q9C000 1473 aa15.27■□□□□ 0.03
RN7SL716P-201ENST00000580539 REM2Q8IYK8 340 aaPredicted RBP15.26■□□□□ 0.03
RN7SL716P-201ENST00000580539 MED1Q15648 1581 aaPredicted RBP15.26■□□□□ 0.03
RN7SL716P-201ENST00000580539 VWDEQ8N2E2 1590 aa15.26■□□□□ 0.03
RN7SL716P-201ENST00000580539 STAG3Q9UJ98 1225 aa15.25■□□□□ 0.03
RN7SL716P-201ENST00000580539 MED14O60244 1454 aa15.24■□□□□ 0.03
RN7SL716P-201ENST00000580539 LRRC7Q96NW7 1537 aa15.23■□□□□ 0.03
RN7SL716P-201ENST00000580539 RGS17Q9UGC6 210 aaPredicted RBP15.23■□□□□ 0.03
RN7SL716P-201ENST00000580539 CHIC2Q9UKJ5 165 aa15.22■□□□□ 0.03
RN7SL716P-201ENST00000580539 EID1Q9Y6B2 187 aa15.22■□□□□ 0.03
RN7SL716P-201ENST00000580539 ALKQ9UM73 1620 aa15.21■□□□□ 0.03
RN7SL716P-201ENST00000580539 POLR1AO95602 1720 aaPredicted RBP15.21■□□□□ 0.03
RN7SL716P-201ENST00000580539 LRRC9Q6ZRR7 1453 aa15.2■□□□□ 0.02
RN7SL716P-201ENST00000580539 SLC26A8Q96RN1 970 aa15.2■□□□□ 0.02
RN7SL716P-201ENST00000580539 ABCC3O15438 1527 aa15.2■□□□□ 0.02
RN7SL716P-201ENST00000580539 ERVK-7P63135 1459 aa15.2■□□□□ 0.02
RN7SL716P-201ENST00000580539 BCANQ96GW7 911 aa15.19■□□□□ 0.02
RN7SL716P-201ENST00000580539 IDI1Q13907 227 aa15.18■□□□□ 0.02
RN7SL716P-201ENST00000580539 ARHGEF5Q12774 1597 aa15.17■□□□□ 0.02
RN7SL716P-201ENST00000580539 PROSER2Q86WR7 435 aaPredicted RBP15.16■□□□□ 0.02
RN7SL716P-201ENST00000580539 STRCP1A6NGW2 1772 aa15.16■□□□□ 0.02
RN7SL716P-201ENST00000580539 IQGAP1P46940 1657 aa15.16■□□□□ 0.02
RN7SL716P-201ENST00000580539 CFAP65Q6ZU64 1925 aaKnown RBP15.15■□□□□ 0.02
RN7SL716P-201ENST00000580539 SCAF11Q99590 1463 aaKnown RBP15.15■□□□□ 0.02
RN7SL716P-201ENST00000580539 DEPDC5O75140 1603 aa15.15■□□□□ 0.02
RN7SL716P-201ENST00000580539 VPS8Q8N3P4 1428 aa15.15■□□□□ 0.02
RN7SL716P-201ENST00000580539 KIF15Q9NS87 1388 aa15.14■□□□□ 0.01
RN7SL716P-201ENST00000580539 POTEAQ6S8J7 498 aa15.14■□□□□ 0.01
RN7SL716P-201ENST00000580539 MYOM3Q5VTT5 1437 aa15.14■□□□□ 0.01
Retrieved 100 of 20,778 RNA–protein pairs in 17.5 ms