RNA–Protein interactions for RNA: ENST00000580263.5

ACADVL-223, Transcript of acyl-CoA dehydrogenase very long chain, human

TSL 2

Gene ACADVL, Length 545 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
ACADVL-223	ENST00000580263	KDM5D	Q9BY66	1539 aa		33.79	■■■■□ 3
ACADVL-223	ENST00000580263	DUOX2	Q9NRD8	1548 aa		33.79	■■■■□ 3
ACADVL-223	ENST00000580263	FAM135A	Q9P2D6	1515 aa		33.77	■■■■□ 3
ACADVL-223	ENST00000580263	PTPRK	Q15262	1439 aa		33.77	■■■■□ 3
ACADVL-223	ENST00000580263	KIF15	Q9NS87	1388 aa		33.74	■■■□□ 2.99
ACADVL-223	ENST00000580263	STRC	Q7RTU9	1775 aa		33.74	■■■□□ 2.99
ACADVL-223	ENST00000580263	MROH1	Q8NDA8	1641 aa		33.74	■■■□□ 2.99
ACADVL-223	ENST00000580263	MYO3A	Q8NEV4	1616 aa		33.74	■■■□□ 2.99
ACADVL-223	ENST00000580263	PPARGC1B	Q86YN6	1023 aa	Known RBP	33.73	■■■□□ 2.99
ACADVL-223	ENST00000580263	FAM50A	Q14320	339 aa	Known RBP	33.72	■■■□□ 2.99
ACADVL-223	ENST00000580263	RRP7BP	Q9NSQ0	103 aa		33.71	■■■□□ 2.99
ACADVL-223	ENST00000580263	CHIC2	Q9UKJ5	165 aa		33.7	■■■□□ 2.99
ACADVL-223	ENST00000580263	WASHC2C	Q9Y4E1	1318 aa		33.7	■■■□□ 2.99
ACADVL-223	ENST00000580263	ZC3H13	Q5T200	1668 aa	Known RBP	33.68	■■■□□ 2.98
ACADVL-223	ENST00000580263	CEP152	O94986	1710 aa		33.68	■■■□□ 2.98
ACADVL-223	ENST00000580263	ZNF142	P52746	1687 aa	Predicted RBP	33.68	■■■□□ 2.98
ACADVL-223	ENST00000580263	ABCC3	O15438	1527 aa		33.66	■■■□□ 2.98
ACADVL-223	ENST00000580263	PZP	P20742	1482 aa		33.65	■■■□□ 2.98
ACADVL-223	ENST00000580263	ERBIN	Q96RT1	1412 aa		33.65	■■■□□ 2.98
ACADVL-223	ENST00000580263	ANKRD30A	Q9BXX3	1397 aa		33.64	■■■□□ 2.98
ACADVL-223	ENST00000580263	CEP170B	Q9Y4F5	1589 aa	Predicted RBP	33.63	■■■□□ 2.97
ACADVL-223	ENST00000580263	ADGRL2	O95490	1459 aa		33.62	■■■□□ 2.97
ACADVL-223	ENST00000580263	NCOA1	Q15788	1441 aa		33.62	■■■□□ 2.97
ACADVL-223	ENST00000580263	FBXO31	Q5XUX0	539 aa	Predicted RBP	33.61	■■■□□ 2.97
ACADVL-223	ENST00000580263	DEPDC5	O75140	1603 aa		33.6	■■■□□ 2.97
ACADVL-223	ENST00000580263	CFAP65	Q6ZU64	1925 aa	Known RBP	33.59	■■■□□ 2.97
ACADVL-223	ENST00000580263	PRDM15	P57071	1507 aa	Predicted RBP	33.59	■■■□□ 2.97
ACADVL-223	ENST00000580263	CAMSAP1	Q5T5Y3	1602 aa		33.59	■■■□□ 2.97
ACADVL-223	ENST00000580263	TNR	Q92752	1358 aa		33.55	■■■□□ 2.96
ACADVL-223	ENST00000580263	A2ML1	A8K2U0	1454 aa		33.51	■■■□□ 2.96
ACADVL-223	ENST00000580263	GRWD1	Q9BQ67	446 aa	Known RBP eCLIP	33.48	■■■□□ 2.95
ACADVL-223	ENST00000580263	SPATA31D1	Q6ZQQ2	1576 aa		33.47	■■■□□ 2.95
ACADVL-223	ENST00000580263	ERVK-7	P63135	1459 aa		33.45	■■■□□ 2.95
ACADVL-223	ENST00000580263	DMRT2	Q9Y5R5	561 aa		33.45	■■■□□ 2.95
ACADVL-223	ENST00000580263	PLA2R1	Q13018	1463 aa		33.44	■■■□□ 2.94
ACADVL-223	ENST00000580263	VWDE	Q8N2E2	1590 aa		33.43	■■■□□ 2.94
ACADVL-223	ENST00000580263	ILDR1	Q86SU0	546 aa	Predicted RBP	33.43	■■■□□ 2.94
ACADVL-223	ENST00000580263	PTPRT	O14522	1441 aa		33.43	■■■□□ 2.94
ACADVL-223	ENST00000580263	ANKRD50	Q9ULJ7	1429 aa		33.43	■■■□□ 2.94
ACADVL-223	ENST00000580263	DROSHA	Q9NRR4	1374 aa	Known RBP eCLIP	33.41	■■■□□ 2.94
ACADVL-223	ENST00000580263	NLRP1	Q9C000	1473 aa		33.4	■■■□□ 2.94
ACADVL-223	ENST00000580263	KANK1	Q14678	1352 aa		33.4	■■■□□ 2.94
ACADVL-223	ENST00000580263	NCKAP5L	Q9HCH0	1330 aa		33.4	■■■□□ 2.94
ACADVL-223	ENST00000580263	ITGAE	P38570	1179 aa		33.4	■■■□□ 2.94
ACADVL-223	ENST00000580263	ARHGAP31	Q2M1Z3	1444 aa		33.37	■■■□□ 2.93
ACADVL-223	ENST00000580263	LMTK2	Q8IWU2	1503 aa		33.37	■■■□□ 2.93
ACADVL-223	ENST00000580263	POLR1A	O95602	1720 aa	Predicted RBP	33.36	■■■□□ 2.93
ACADVL-223	ENST00000580263	ROCK1	Q13464	1354 aa		33.36	■■■□□ 2.93
ACADVL-223	ENST00000580263	RRBP1	Q9P2E9	1410 aa	Known RBP	33.36	■■■□□ 2.93
ACADVL-223	ENST00000580263	UGGT1	Q9NYU2	1555 aa		33.34	■■■□□ 2.93
ACADVL-223	ENST00000580263	UNC13B	O14795	1591 aa		33.31	■■■□□ 2.92
ACADVL-223	ENST00000580263	EFCAB6	Q5THR3	1501 aa		33.3	■■■□□ 2.92
ACADVL-223	ENST00000580263	PKD2	Q13563	968 aa		33.3	■■■□□ 2.92
ACADVL-223	ENST00000580263	UBR1	Q8IWV7	1749 aa		33.28	■■■□□ 2.92
ACADVL-223	ENST00000580263	NEURL4	Q96JN8	1562 aa		33.27	■■■□□ 2.92
ACADVL-223	ENST00000580263	CERK	Q8TCT0	537 aa		33.25	■■■□□ 2.91
ACADVL-223	ENST00000580263	TET3	O43151	1660 aa		33.24	■■■□□ 2.91
ACADVL-223	ENST00000580263	THEMIS	Q8N1K5	641 aa	Predicted RBP	33.23	■■■□□ 2.91
ACADVL-223	ENST00000580263	FBXO41	Q8TF61	875 aa		33.23	■■■□□ 2.91
ACADVL-223	ENST00000580263	LTBP4	Q8N2S1	1624 aa		33.22	■■■□□ 2.91
ACADVL-223	ENST00000580263	GCC2	Q8IWJ2	1684 aa		33.22	■■■□□ 2.91
ACADVL-223	ENST00000580263	PIK3C2B	O00750	1634 aa		33.21	■■■□□ 2.91
ACADVL-223	ENST00000580263	SYNM	O15061	1565 aa		33.21	■■■□□ 2.91
ACADVL-223	ENST00000580263	IQGAP3	Q86VI3	1631 aa		33.17	■■■□□ 2.9
ACADVL-223	ENST00000580263	NOS1	P29475	1434 aa		33.16	■■■□□ 2.9
ACADVL-223	ENST00000580263	ANKLE2	Q86XL3	938 aa		33.15	■■■□□ 2.9
ACADVL-223	ENST00000580263		E9PCH4	1651 aa		33.13	■■■□□ 2.89
ACADVL-223	ENST00000580263	RPRD2	Q5VT52	1461 aa	Known RBP	33.13	■■■□□ 2.89
ACADVL-223	ENST00000580263	ZNF335	Q9H4Z2	1342 aa	Predicted RBP	33.13	■■■□□ 2.89
ACADVL-223	ENST00000580263	IQGAP1	P46940	1657 aa		33.1	■■■□□ 2.89
ACADVL-223	ENST00000580263	KDM5A	P29375	1690 aa	Known RBP	33.1	■■■□□ 2.89
ACADVL-223	ENST00000580263	MED14	O60244	1454 aa		33.09	■■■□□ 2.89
ACADVL-223	ENST00000580263	IDI1	Q13907	227 aa		33.08	■■■□□ 2.89
ACADVL-223	ENST00000580263	NPHP4	O75161	1426 aa	Predicted RBP	33.08	■■■□□ 2.89
ACADVL-223	ENST00000580263	NUP155	O75694	1391 aa		33.07	■■■□□ 2.88
ACADVL-223	ENST00000580263	SLIT1	O75093	1534 aa		33.07	■■■□□ 2.88
ACADVL-223	ENST00000580263	ARHGAP23	Q9P227	1491 aa		33.06	■■■□□ 2.88
ACADVL-223	ENST00000580263	MYO5B	Q9ULV0	1848 aa		33.05	■■■□□ 2.88
ACADVL-223	ENST00000580263	NAIP	Q13075	1403 aa		33.05	■■■□□ 2.88
ACADVL-223	ENST00000580263	ADGRB3	O60242	1522 aa		33.02	■■■□□ 2.88
ACADVL-223	ENST00000580263	SCAF11	Q99590	1463 aa	Known RBP	33.02	■■■□□ 2.88
ACADVL-223	ENST00000580263	STAG3	Q9UJ98	1225 aa		33.01	■■■□□ 2.87
ACADVL-223	ENST00000580263	LTK	P29376	864 aa		32.98	■■■□□ 2.87
ACADVL-223	ENST00000580263	TMEM2	Q9UHN6	1383 aa		32.97	■■■□□ 2.87
ACADVL-223	ENST00000580263	SLC52A1	Q9NWF4	448 aa		32.97	■■■□□ 2.87
ACADVL-223	ENST00000580263	TXNDC2	Q86VQ3	553 aa		32.96	■■■□□ 2.87
ACADVL-223	ENST00000580263	IQSEC2	Q5JU85	1478 aa		32.96	■■■□□ 2.87
ACADVL-223	ENST00000580263	HFM1	A2PYH4	1435 aa		32.95	■■■□□ 2.87
ACADVL-223	ENST00000580263	STRCP1	A6NGW2	1772 aa		32.93	■■■□□ 2.86
ACADVL-223	ENST00000580263	TMEM131L	A2VDJ0	1609 aa		32.92	■■■□□ 2.86
ACADVL-223	ENST00000580263	SPHKAP	Q2M3C7	1700 aa		32.91	■■■□□ 2.86
ACADVL-223	ENST00000580263	EID1	Q9Y6B2	187 aa		32.9	■■■□□ 2.86
ACADVL-223	ENST00000580263	CPS1	P31327	1500 aa		32.88	■■■□□ 2.85
ACADVL-223	ENST00000580263	ZFYVE9	O95405	1425 aa		32.8	■■■□□ 2.84
ACADVL-223	ENST00000580263	CHGA	P10645	457 aa	Known RBP	32.8	■■■□□ 2.84
ACADVL-223	ENST00000580263	TRIM52	Q96A61	297 aa		32.79	■■■□□ 2.84
ACADVL-223	ENST00000580263	RIMS2	Q9UQ26	1411 aa		32.77	■■■□□ 2.84
ACADVL-223	ENST00000580263	CLTCL1	P53675	1640 aa		32.73	■■■□□ 2.83
ACADVL-223	ENST00000580263	TRPM2	O94759	1503 aa		32.72	■■■□□ 2.83
ACADVL-223	ENST00000580263	LRRC7	Q96NW7	1537 aa		32.72	■■■□□ 2.83

Retrieved 100 of 20,778 RNA–protein pairs in 164.6 ms