RNA–Protein interactions for RNA: ENST00000580263.5

ACADVL-223, Transcript of acyl-CoA dehydrogenase very long chain, humanhuman

TSL 2

Gene ACADVL, Length 545 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACADVL-223ENST00000580263 NISCHQ9Y2I1 1504 aa53.63■■■■■ 6.18
ACADVL-223ENST00000580263 CCDC180Q9P1Z9 1646 aa47.88■■■■■ 5.25
ACADVL-223ENST00000580263 ABCC9O60706 1549 aa47.16■■■■■ 5.14
ACADVL-223ENST00000580263 RB1CC1Q8TDY2 1594 aa45.18■■■■■ 4.82
ACADVL-223ENST00000580263 NACADO15069 1562 aa45.03■■■■■ 4.8
ACADVL-223ENST00000580263 DCAF8L2P0C7V8 631 aa44.92■■■■■ 4.78
ACADVL-223ENST00000580263 ZCCHC6Q5VYS8 1495 aaKnown RBP44.62■■■■■ 4.73
ACADVL-223ENST00000580263 MYO15BQ96JP2 1530 aa44.6■■■■■ 4.73
ACADVL-223ENST00000580263 UNC13AQ9UPW8 1703 aa44.33■■■■■ 4.69
ACADVL-223ENST00000580263 DCAF1Q9Y4B6 1507 aa44.31■■■■■ 4.68
ACADVL-223ENST00000580263 PABPN1Q86U42 306 aaKnown RBP eCLIP43.98■■■■■ 4.633e-8■■■□□ 16.7
ACADVL-223ENST00000580263 BICRAQ9NZM4 1560 aa43.89■■■■■ 4.62
ACADVL-223ENST00000580263 SCRIBQ14160 1630 aa43.7■■■■■ 4.59
ACADVL-223ENST00000580263 DNAJC5BQ9UF47 199 aa43.58■■■■■ 4.57
ACADVL-223ENST00000580263 SHROOM4Q9ULL8 1493 aa43.25■■■■■ 4.51
ACADVL-223ENST00000580263 EIF4G1Q04637 1599 aaKnown RBP42.73■■■■■ 4.43
ACADVL-223ENST00000580263 CC2D2AQ9P2K1 1620 aa42.67■■■■■ 4.42
ACADVL-223ENST00000580263 CECR2Q9BXF3 1484 aa42.37■■■■■ 4.37
ACADVL-223ENST00000580263 SMARCA4P51532 1647 aa41.73■■■■■ 4.27
ACADVL-223ENST00000580263 BAZ1AQ9NRL2 1556 aaPredicted RBP41.59■■■■■ 4.25
ACADVL-223ENST00000580263 ATAD2BQ9ULI0 1458 aa41.53■■■■■ 4.24
ACADVL-223ENST00000580263 NCAPD3P42695 1498 aa41.53■■■■■ 4.24
ACADVL-223ENST00000580263 SMARCA2P51531 1590 aa41.46■■■■■ 4.23
ACADVL-223ENST00000580263 MROH2BQ7Z745 1585 aa41.37■■■■■ 4.21
ACADVL-223ENST00000580263 HMGXB3Q12766 1538 aa41.34■■■■■ 4.21
ACADVL-223ENST00000580263 PEG3Q9GZU2 1588 aa41.29■■■■■ 4.2
ACADVL-223ENST00000580263 BAZ1BQ9UIG0 1483 aaKnown RBP41.18■■■■■ 4.18
ACADVL-223ENST00000580263 WIZO95785 1651 aa40.96■■■■■ 4.15
ACADVL-223ENST00000580263 NESP48681 1621 aa40.74■■■■■ 4.11
ACADVL-223ENST00000580263 RSF1Q96T23 1441 aaPredicted RBP40.72■■■■■ 4.11
ACADVL-223ENST00000580263 ERCC6Q03468 1493 aa40.63■■■■■ 4.09
ACADVL-223ENST00000580263 LAMC3Q9Y6N6 1575 aa40.53■■■■■ 4.08
ACADVL-223ENST00000580263 TOP2AP11388 1531 aaKnown RBP40.43■■■■■ 4.06
ACADVL-223ENST00000580263 KIF21AQ7Z4S6 1674 aa40.31■■■■■ 4.04
ACADVL-223ENST00000580263 CADPSQ9ULU8 1353 aa40.3■■■■■ 4.04
ACADVL-223ENST00000580263 CUX2O14529 1486 aa40.29■■■■■ 4.04
ACADVL-223ENST00000580263 PDS5BQ9NTI5 1447 aa40.21■■■■■ 4.03
ACADVL-223ENST00000580263 THOC2Q8NI27 1593 aaKnown RBP40.21■■■■■ 4.03
ACADVL-223ENST00000580263 CFTRP13569 1480 aa40■■■■□ 3.99
ACADVL-223ENST00000580263 CCDC88BA6NC98 1476 aa39.94■■■■□ 3.98
ACADVL-223ENST00000580263 FANCD2Q9BXW9 1451 aa39.88■■■■□ 3.97
ACADVL-223ENST00000580263 MRC2Q9UBG0 1479 aa39.87■■■■□ 3.97
ACADVL-223ENST00000580263 CEP164Q9UPV0 1460 aa39.86■■■■□ 3.97
ACADVL-223ENST00000580263 PRDM2Q13029 1718 aa39.84■■■■□ 3.97
ACADVL-223ENST00000580263 WDR62O43379 1518 aa39.77■■■■□ 3.96
ACADVL-223ENST00000580263 URB2Q14146 1524 aaKnown RBP39.54■■■■□ 3.92
ACADVL-223ENST00000580263 SUPT5HO00267 1087 aaKnown RBP39.45■■■■□ 3.91
ACADVL-223ENST00000580263 DNAJC5Q9H3Z4 198 aa39.43■■■■□ 3.9
ACADVL-223ENST00000580263 TOPBP1Q92547 1522 aa39.23■■■■□ 3.87
ACADVL-223ENST00000580263 DNMBPQ6XZF7 1577 aa39.15■■■■□ 3.86
ACADVL-223ENST00000580263 ABCC8Q09428 1581 aa39.12■■■■□ 3.85
ACADVL-223ENST00000580263 IFT140Q96RY7 1462 aa39.01■■■■□ 3.84
ACADVL-223ENST00000580263 ZNF608Q9ULD9 1512 aaPredicted RBP38.94■■■■□ 3.82
ACADVL-223ENST00000580263 POLA1P09884 1462 aaPredicted RBP38.86■■■■□ 3.81
ACADVL-223ENST00000580263 TARBP1Q13395 1621 aaKnown RBP38.85■■■■□ 3.81
ACADVL-223ENST00000580263 CUX1P39880 1505 aa38.83■■■■□ 3.81
ACADVL-223ENST00000580263 EIF4G3O43432 1585 aaKnown RBP38.79■■■■□ 3.8
ACADVL-223ENST00000580263 FGD5Q6ZNL6 1462 aa38.73■■■■□ 3.79
ACADVL-223ENST00000580263 RAD54L2Q9Y4B4 1467 aa38.73■■■■□ 3.79
ACADVL-223ENST00000580263 SOGA1O94964 1423 aa38.66■■■■□ 3.78
ACADVL-223ENST00000580263 AQRO60306 1485 aaKnown RBP eCLIP38.64■■■■□ 3.781e-9■■■■□ 25.4
ACADVL-223ENST00000580263 OSCARQ8IYS5 282 aa38.53■■■■□ 3.76
ACADVL-223ENST00000580263 TDRD9Q8NDG6 1382 aaKnown RBP38.51■■■■□ 3.76
ACADVL-223ENST00000580263 WDR97A6NE52 1622 aa38.51■■■■□ 3.76
ACADVL-223ENST00000580263 CHD1O14646 1710 aa38.43■■■■□ 3.74
ACADVL-223ENST00000580263 BIVM-ERCC5R4GMW8 1640 aa38.43■■■■□ 3.74
ACADVL-223ENST00000580263 SYNJ1O43426 1573 aa38.41■■■■□ 3.74
ACADVL-223ENST00000580263 WRNQ14191 1432 aaPredicted RBP eCLIP38.4■■■■□ 3.74
ACADVL-223ENST00000580263 TOP2BQ02880 1626 aa38.39■■■■□ 3.74
ACADVL-223ENST00000580263 ABCA10Q8WWZ4 1543 aa38.31■■■■□ 3.72
ACADVL-223ENST00000580263 SNAPC4Q5SXM2 1469 aa38.29■■■■□ 3.72
ACADVL-223ENST00000580263 PBRM1Q86U86 1689 aa38.29■■■■□ 3.72
ACADVL-223ENST00000580263 GRIN2BQ13224 1484 aa38.25■■■■□ 3.71
ACADVL-223ENST00000580263 ABCA5Q8WWZ7 1642 aa38.25■■■■□ 3.71
ACADVL-223ENST00000580263 GAPVD1Q14C86 1478 aa38.22■■■■□ 3.71
ACADVL-223ENST00000580263 FBLN2P98095 1184 aa38.21■■■■□ 3.71
ACADVL-223ENST00000580263 MAGI1Q96QZ7 1491 aaPredicted RBP38.18■■■■□ 3.7
ACADVL-223ENST00000580263 RIMBP3CA6NJZ7 1639 aa38.09■■■■□ 3.69
ACADVL-223ENST00000580263 RIMBP3BA6NNM3 1639 aa38.09■■■■□ 3.69
ACADVL-223ENST00000580263 RIMBP3Q9UFD9 1639 aa38.09■■■■□ 3.69
ACADVL-223ENST00000580263 TRIM41Q8WV44 630 aa38.05■■■■□ 3.68
ACADVL-223ENST00000580263 SYNJ2O15056 1496 aa38.04■■■■□ 3.68
ACADVL-223ENST00000580263 CHMP7Q8WUX9 453 aaPredicted RBP38.02■■■■□ 3.68
ACADVL-223ENST00000580263 ARHGEF11O15085 1522 aa38■■■■□ 3.67
ACADVL-223ENST00000580263 CLASP1Q7Z460 1538 aa37.92■■■■□ 3.66
ACADVL-223ENST00000580263 ADAMTS12P58397 1594 aa37.91■■■■□ 3.66
ACADVL-223ENST00000580263 ERICH3Q5RHP9 1530 aa37.84■■■■□ 3.65
ACADVL-223ENST00000580263 GRIN2AQ12879 1464 aa37.78■■■■□ 3.64
ACADVL-223ENST00000580263 FHAD1B1AJZ9 1412 aa37.75■■■■□ 3.63
ACADVL-223ENST00000580263 ARAP1Q96P48 1450 aa37.68■■■■□ 3.62
ACADVL-223ENST00000580263 CEP170Q5SW79 1584 aa37.67■■■■□ 3.62
ACADVL-223ENST00000580263 CYB5RLQ6IPT4 315 aa37.62■■■■□ 3.61
ACADVL-223ENST00000580263 NUP160Q12769 1436 aa37.61■■■■□ 3.61
ACADVL-223ENST00000580263 KIF27Q86VH2 1401 aa37.6■■■■□ 3.61
ACADVL-223ENST00000580263 IGF1RP08069 1367 aa37.49■■■■□ 3.59
ACADVL-223ENST00000580263 CUL7Q14999 1698 aa37.47■■■■□ 3.59
ACADVL-223ENST00000580263 SHROOM2Q13796 1616 aa37.43■■■■□ 3.58
ACADVL-223ENST00000580263 ERCC6L2Q5T890 1561 aa37.42■■■■□ 3.58
ACADVL-223ENST00000580263 RUSC2Q8N2Y8 1516 aa37.36■■■■□ 3.57
ACADVL-223ENST00000580263 CARMIL1Q5VZK9 1371 aa37.27■■■■□ 3.56
Retrieved 100 of 20,778 RNA–protein pairs in 190.6 ms