RNA–Protein interactions for RNA: ENST00000578348.5

GGA3-205, Transcript of golgi associated, gamma adaptin ear containing, ARF binding protein 3, humanhuman

TSL 2 BASIC

Gene GGA3, Length 2,251 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GGA3-205ENST00000578348 FANCAO15360 1455 aa15.79■□□□□ 0.12
GGA3-205ENST00000578348 RALGAPBQ86X10 1494 aa15.78■□□□□ 0.12
GGA3-205ENST00000578348 INO80Q9ULG1 1556 aaPredicted RBP15.77■□□□□ 0.12
GGA3-205ENST00000578348 SPAG9O60271 1321 aaKnown RBP15.77■□□□□ 0.11
GGA3-205ENST00000578348 RBM19Q9Y4C8 960 aaKnown RBP15.77■□□□□ 0.11
GGA3-205ENST00000578348 CCDC7Q96M83 1385 aa15.76■□□□□ 0.11
GGA3-205ENST00000578348 CCDC144AA2RUR9 1427 aa15.75■□□□□ 0.11
GGA3-205ENST00000578348 CNTLNQ9NXG0 1405 aa15.75■□□□□ 0.11
GGA3-205ENST00000578348 ATP7AQ04656 1500 aa15.75■□□□□ 0.11
GGA3-205ENST00000578348 KDM5CP41229 1560 aa15.74■□□□□ 0.11
GGA3-205ENST00000578348 ATP10AO60312 1499 aa15.74■□□□□ 0.11
GGA3-205ENST00000578348 ADGRL1O94910 1474 aa15.74■□□□□ 0.11
GGA3-205ENST00000578348 DEPDC5O75140 1603 aa15.73■□□□□ 0.11
GGA3-205ENST00000578348 NPM1P06748 294 aaKnown RBP eCLIP15.73■□□□□ 0.11
GGA3-205ENST00000578348 IRX6P78412 446 aaPredicted RBP15.73■□□□□ 0.11
GGA3-205ENST00000578348 GRWD1Q9BQ67 446 aaKnown RBP eCLIP15.73■□□□□ 0.112e-7■■■□□ 16.1
GGA3-205ENST00000578348 PLA2R1Q13018 1463 aa15.73■□□□□ 0.11
GGA3-205ENST00000578348 CFAP74Q9C0B2 1584 aa15.72■□□□□ 0.11
GGA3-205ENST00000578348 BCL11AQ9H165 835 aa15.72■□□□□ 0.11
GGA3-205ENST00000578348 USP47Q96K76 1375 aa15.72■□□□□ 0.11
GGA3-205ENST00000578348 C11orf95C9JLR9 678 aaPredicted RBP15.71■□□□□ 0.11
GGA3-205ENST00000578348 CCDC184Q52MB2 194 aa15.71■□□□□ 0.11
GGA3-205ENST00000578348 AFAP1Q8N556 730 aa15.71■□□□□ 0.11
GGA3-205ENST00000578348 EIF2AK4Q9P2K8 1649 aaKnown RBP15.71■□□□□ 0.11
GGA3-205ENST00000578348 SCAPERQ9BY12 1400 aa15.71■□□□□ 0.1
GGA3-205ENST00000578348 ZNF326Q5BKZ1 582 aaKnown RBP15.7■□□□□ 0.1
GGA3-205ENST00000578348 KIF7Q2M1P5 1343 aa15.68■□□□□ 0.1
GGA3-205ENST00000578348 PRKRIP1Q9H875 184 aaPredicted RBP15.68■□□□□ 0.1
GGA3-205ENST00000578348 E9PCH4 1651 aa15.67■□□□□ 0.1
GGA3-205ENST00000578348 TRPM1Q7Z4N2 1603 aa15.67■□□□□ 0.1
GGA3-205ENST00000578348 BCORL1Q5H9F3 1711 aa15.67■□□□□ 0.1
GGA3-205ENST00000578348 TET3O43151 1660 aa15.66■□□□□ 0.1
GGA3-205ENST00000578348 FAM9BQ8IZU0 186 aa15.66■□□□□ 0.1
GGA3-205ENST00000578348 DCAF11Q8TEB1 546 aa15.66■□□□□ 0.1
GGA3-205ENST00000578348 VWDEQ8N2E2 1590 aa15.66■□□□□ 0.1
GGA3-205ENST00000578348 PRAG1Q86YV5 1406 aa15.66■□□□□ 0.1
GGA3-205ENST00000578348 A2MP01023 1474 aa15.66■□□□□ 0.1
GGA3-205ENST00000578348 ARID4BQ4LE39 1312 aaPredicted RBP15.66■□□□□ 0.1
GGA3-205ENST00000578348 ZNF518AQ6AHZ1 1483 aa15.65■□□□□ 0.1
GGA3-205ENST00000578348 MRS2Q9HD23 443 aa15.65■□□□□ 0.1
GGA3-205ENST00000578348 KDM2AQ9Y2K7 1162 aa15.64■□□□□ 0.09
GGA3-205ENST00000578348 LAMC1P11047 1609 aa15.64■□□□□ 0.09
GGA3-205ENST00000578348 TRPM2O94759 1503 aa15.64■□□□□ 0.09
GGA3-205ENST00000578348 PRDM15P57071 1507 aaPredicted RBP15.64■□□□□ 0.09
GGA3-205ENST00000578348 CD109Q6YHK3 1445 aa15.64■□□□□ 0.09
GGA3-205ENST00000578348 KIDINS220Q9ULH0 1771 aa15.64■□□□□ 0.09
GGA3-205ENST00000578348 DHX29Q7Z478 1369 aaKnown RBP15.64■□□□□ 0.09
GGA3-205ENST00000578348 CARD11Q9BXL7 1154 aa15.64■□□□□ 0.09
GGA3-205ENST00000578348 SPHKAPQ2M3C7 1700 aa15.63■□□□□ 0.09
GGA3-205ENST00000578348 KANK1Q14678 1352 aa15.63■□□□□ 0.09
GGA3-205ENST00000578348 MROH1Q8NDA8 1641 aa15.61■□□□□ 0.09
GGA3-205ENST00000578348 ROCK2O75116 1388 aaKnown RBP15.61■□□□□ 0.09
GGA3-205ENST00000578348 PTPRTO14522 1441 aa15.61■□□□□ 0.09
GGA3-205ENST00000578348 CEP152O94986 1710 aa15.61■□□□□ 0.09
GGA3-205ENST00000578348 POGZQ7Z3K3 1410 aa15.61■□□□□ 0.09
GGA3-205ENST00000578348 GPRASP1Q5JY77 1395 aa15.6■□□□□ 0.09
GGA3-205ENST00000578348 MYT1LQ9UL68 1186 aa15.59■□□□□ 0.09
GGA3-205ENST00000578348 RGL3Q3MIN7 710 aa15.58■□□□□ 0.08
GGA3-205ENST00000578348 NEO1Q92859 1461 aa15.58■□□□□ 0.08
GGA3-205ENST00000578348 MLH3Q9UHC1 1453 aa15.58■□□□□ 0.08
GGA3-205ENST00000578348 HECW2Q9P2P5 1572 aa15.58■□□□□ 0.08
GGA3-205ENST00000578348 RNF17Q9BXT8 1623 aaKnown RBP15.58■□□□□ 0.08
GGA3-205ENST00000578348 ZBED9Q6R2W3 1325 aa15.57■□□□□ 0.08
GGA3-205ENST00000578348 CLTCL1P53675 1640 aa15.57■□□□□ 0.08
GGA3-205ENST00000578348 KIF3BO15066 747 aa15.57■□□□□ 0.08
GGA3-205ENST00000578348 ERICH6BQ5W0A0 696 aa15.56■□□□□ 0.08
GGA3-205ENST00000578348 NEURL4Q96JN8 1562 aa15.56■□□□□ 0.08
GGA3-205ENST00000578348 PPP4R2Q9NY27 417 aa15.56■□□□□ 0.08
GGA3-205ENST00000578348 LMTK2Q8IWU2 1503 aa15.56■□□□□ 0.08
GGA3-205ENST00000578348 CNGB1Q14028 1251 aaPredicted RBP15.55■□□□□ 0.08
GGA3-205ENST00000578348 EFCAB6Q5THR3 1501 aa15.55■□□□□ 0.08
GGA3-205ENST00000578348 MSH5O43196 834 aa15.54■□□□□ 0.08
GGA3-205ENST00000578348 POLR3GLQ9BT43 218 aa15.54■□□□□ 0.08
GGA3-205ENST00000578348 MADDQ8WXG6 1647 aa15.54■□□□□ 0.08
GGA3-205ENST00000578348 ST20-MTHFSA0A0A6YYL1 179 aa15.54■□□□□ 0.08
GGA3-205ENST00000578348 MAP3K4Q9Y6R4 1608 aa15.53■□□□□ 0.08
GGA3-205ENST00000578348 FRMPD1Q5SYB0 1578 aa15.53■□□□□ 0.08
GGA3-205ENST00000578348 STAC3Q96MF2 364 aa15.52■□□□□ 0.08
GGA3-205ENST00000578348 GLI2P10070 1586 aa15.52■□□□□ 0.08
GGA3-205ENST00000578348 PPRC1Q5VV67 1664 aaKnown RBP15.52■□□□□ 0.07
GGA3-205ENST00000578348 ABCA6Q8N139 1617 aa15.51■□□□□ 0.07
GGA3-205ENST00000578348 RIMBP3CA6NJZ7 1639 aa15.5■□□□□ 0.07
GGA3-205ENST00000578348 RIMBP3BA6NNM3 1639 aa15.5■□□□□ 0.07
GGA3-205ENST00000578348 RIMBP3Q9UFD9 1639 aa15.5■□□□□ 0.07
GGA3-205ENST00000578348 B4GALNT3Q6L9W6 998 aa15.5■□□□□ 0.07
GGA3-205ENST00000578348 FANCIQ9NVI1 1328 aa15.5■□□□□ 0.07
GGA3-205ENST00000578348 NBPF1Q3BBV0 1214 aa15.5■□□□□ 0.07
GGA3-205ENST00000578348 RICTORQ6R327 1708 aa15.48■□□□□ 0.07
GGA3-205ENST00000578348 COL17A1Q9UMD9 1497 aaPredicted RBP15.47■□□□□ 0.07
GGA3-205ENST00000578348 KIF1BO60333 1816 aa15.47■□□□□ 0.07
GGA3-205ENST00000578348 IQGAP1P46940 1657 aa15.47■□□□□ 0.07
GGA3-205ENST00000578348 KIAA1210Q9ULL0 1709 aa15.47■□□□□ 0.07
GGA3-205ENST00000578348 DIP2CQ9Y2E4 1556 aa15.46■□□□□ 0.06
GGA3-205ENST00000578348 MYOM2P54296 1465 aa15.45■□□□□ 0.06
GGA3-205ENST00000578348 IFT172Q9UG01 1749 aa15.44■□□□□ 0.06
GGA3-205ENST00000578348 CYB5RLQ6IPT4 315 aa15.43■□□□□ 0.06
GGA3-205ENST00000578348 UGGT1Q9NYU2 1555 aa15.43■□□□□ 0.06
GGA3-205ENST00000578348 ABCC3O15438 1527 aa15.43■□□□□ 0.06
GGA3-205ENST00000578348 KTN1Q86UP2 1357 aaKnown RBP15.43■□□□□ 0.06
GGA3-205ENST00000578348 ERICH6Q7L0X2 663 aa15.43■□□□□ 0.06
Retrieved 100 of 20,778 RNA–protein pairs in 71.6 ms