RNA–Protein interactions for RNA: ENST00000578307.1

BPTF-211, Transcript of bromodomain PHD finger transcription factor, humanhuman

TSL 2

Gene BPTF, Length 2,121 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BPTF-211ENST00000578307 IQGAP3Q86VI3 1631 aa13.35□□□□□ -0.27
BPTF-211ENST00000578307 C11orf95C9JLR9 678 aaPredicted RBP13.34□□□□□ -0.27
BPTF-211ENST00000578307 ERBINQ96RT1 1412 aa13.34□□□□□ -0.27
BPTF-211ENST00000578307 RALGAPBQ86X10 1494 aa13.34□□□□□ -0.27
BPTF-211ENST00000578307 KDM5CP41229 1560 aa13.34□□□□□ -0.27
BPTF-211ENST00000578307 USP47Q96K76 1375 aa13.33□□□□□ -0.28
BPTF-211ENST00000578307 WDR7Q9Y4E6 1490 aa13.33□□□□□ -0.28
BPTF-211ENST00000578307 KIF7Q2M1P5 1343 aa13.32□□□□□ -0.28
BPTF-211ENST00000578307 CCDC144AA2RUR9 1427 aa13.32□□□□□ -0.28
BPTF-211ENST00000578307 MAGI2Q86UL8 1455 aa13.31□□□□□ -0.28
BPTF-211ENST00000578307 UBE2Q2Q8WVN8 375 aa13.31□□□□□ -0.28
BPTF-211ENST00000578307 GRWD1Q9BQ67 446 aaKnown RBP eCLIP13.31□□□□□ -0.284e-8■■■□□ 18.5
BPTF-211ENST00000578307 TRAPPC8Q9Y2L5 1435 aa13.3□□□□□ -0.28
BPTF-211ENST00000578307 BCORL1Q5H9F3 1711 aa13.3□□□□□ -0.28
BPTF-211ENST00000578307 DCAF11Q8TEB1 546 aa13.29□□□□□ -0.28
BPTF-211ENST00000578307 ABCA9Q8IUA7 1624 aa13.29□□□□□ -0.28
BPTF-211ENST00000578307 RTEL1-TNFRSF6BF6WH68 1400 aa13.29□□□□□ -0.28
BPTF-211ENST00000578307 SPAG9O60271 1321 aaKnown RBP13.28□□□□□ -0.28
BPTF-211ENST00000578307 ARID4BQ4LE39 1312 aaPredicted RBP13.28□□□□□ -0.28
BPTF-211ENST00000578307 CARD11Q9BXL7 1154 aa13.28□□□□□ -0.28
BPTF-211ENST00000578307 KDM2AQ9Y2K7 1162 aa13.28□□□□□ -0.28
BPTF-211ENST00000578307 SUPT16HQ9Y5B9 1047 aaKnown RBP13.28□□□□□ -0.28
BPTF-211ENST00000578307 ERICH6BQ5W0A0 696 aa13.27□□□□□ -0.28
BPTF-211ENST00000578307 DAXXQ9UER7 740 aaPredicted RBP13.27□□□□□ -0.28
BPTF-211ENST00000578307 ZFYVE16Q7Z3T8 1539 aa13.27□□□□□ -0.29
BPTF-211ENST00000578307 PRKRIP1Q9H875 184 aaPredicted RBP13.27□□□□□ -0.29
BPTF-211ENST00000578307 FANCAO15360 1455 aa13.26□□□□□ -0.29
BPTF-211ENST00000578307 PLA2R1Q13018 1463 aa13.26□□□□□ -0.29
BPTF-211ENST00000578307 TRPM1Q7Z4N2 1603 aa13.25□□□□□ -0.29
BPTF-211ENST00000578307 ATP10AO60312 1499 aa13.25□□□□□ -0.29
BPTF-211ENST00000578307 ASXL2Q76L83 1435 aa13.24□□□□□ -0.29
BPTF-211ENST00000578307 ROCK2O75116 1388 aaKnown RBP13.24□□□□□ -0.29
BPTF-211ENST00000578307 PRAG1Q86YV5 1406 aa13.23□□□□□ -0.29
BPTF-211ENST00000578307 INO80Q9ULG1 1556 aaPredicted RBP13.23□□□□□ -0.29
BPTF-211ENST00000578307 OSCARQ8IYS5 282 aa13.23□□□□□ -0.29
BPTF-211ENST00000578307 AFAP1Q8N556 730 aa13.23□□□□□ -0.29
BPTF-211ENST00000578307 ATP7AQ04656 1500 aa13.23□□□□□ -0.29
BPTF-211ENST00000578307 POLR3GLQ9BT43 218 aa13.22□□□□□ -0.29
BPTF-211ENST00000578307 ADGRL1O94910 1474 aa13.22□□□□□ -0.29
BPTF-211ENST00000578307 DEPDC5O75140 1603 aa13.22□□□□□ -0.29
BPTF-211ENST00000578307 EIF2AK4Q9P2K8 1649 aaKnown RBP13.22□□□□□ -0.29
BPTF-211ENST00000578307 HNRNPUQ00839 825 aaKnown RBP eCLIP13.22□□□□□ -0.29
BPTF-211ENST00000578307 A2MP01023 1474 aa13.22□□□□□ -0.29
BPTF-211ENST00000578307 RGL3Q3MIN7 710 aa13.21□□□□□ -0.29
BPTF-211ENST00000578307 E9PCH4 1651 aa13.21□□□□□ -0.3
BPTF-211ENST00000578307 NPM1P06748 294 aaKnown RBP eCLIP13.21□□□□□ -0.3
BPTF-211ENST00000578307 LAMC1P11047 1609 aa13.21□□□□□ -0.3
BPTF-211ENST00000578307 SCAPERQ9BY12 1400 aa13.2□□□□□ -0.3
BPTF-211ENST00000578307 ST20-MTHFSA0A0A6YYL1 179 aa13.19□□□□□ -0.3
BPTF-211ENST00000578307 MRS2Q9HD23 443 aa13.19□□□□□ -0.3
BPTF-211ENST00000578307 DHX29Q7Z478 1369 aaKnown RBP13.19□□□□□ -0.3
BPTF-211ENST00000578307 SPHKAPQ2M3C7 1700 aa13.18□□□□□ -0.3
BPTF-211ENST00000578307 NEFLP07196 543 aa13.18□□□□□ -0.3
BPTF-211ENST00000578307 TET3O43151 1660 aa13.18□□□□□ -0.3
BPTF-211ENST00000578307 CCDC184Q52MB2 194 aa13.18□□□□□ -0.3
BPTF-211ENST00000578307 KANK1Q14678 1352 aa13.17□□□□□ -0.3
BPTF-211ENST00000578307 CEP152O94986 1710 aa13.17□□□□□ -0.3
BPTF-211ENST00000578307 EIF5BO60841 1220 aaKnown RBP13.17□□□□□ -0.3
BPTF-211ENST00000578307 GPRASP1Q5JY77 1395 aa13.17□□□□□ -0.3
BPTF-211ENST00000578307 TRPM2O94759 1503 aa13.17□□□□□ -0.3
BPTF-211ENST00000578307 CFAP74Q9C0B2 1584 aa13.17□□□□□ -0.3
BPTF-211ENST00000578307 PRDM15P57071 1507 aaPredicted RBP13.15□□□□□ -0.3
BPTF-211ENST00000578307 FKBP8Q14318 412 aa13.15□□□□□ -0.3
BPTF-211ENST00000578307 FAM9BQ8IZU0 186 aa13.15□□□□□ -0.3
BPTF-211ENST00000578307 VWDEQ8N2E2 1590 aa13.15□□□□□ -0.3
BPTF-211ENST00000578307 KIDINS220Q9ULH0 1771 aa13.14□□□□□ -0.31
BPTF-211ENST00000578307 NBPF1Q3BBV0 1214 aa13.13□□□□□ -0.31
BPTF-211ENST00000578307 ZNF518AQ6AHZ1 1483 aa13.13□□□□□ -0.31
BPTF-211ENST00000578307 PTPRTO14522 1441 aa13.13□□□□□ -0.31
BPTF-211ENST00000578307 RNF17Q9BXT8 1623 aaKnown RBP13.13□□□□□ -0.31
BPTF-211ENST00000578307 KIF3BO15066 747 aa13.12□□□□□ -0.31
BPTF-211ENST00000578307 CLTCL1P53675 1640 aa13.12□□□□□ -0.31
BPTF-211ENST00000578307 MADDQ8WXG6 1647 aa13.11□□□□□ -0.31
BPTF-211ENST00000578307 CD109Q6YHK3 1445 aa13.11□□□□□ -0.31
BPTF-211ENST00000578307 MROH1Q8NDA8 1641 aa13.11□□□□□ -0.31
BPTF-211ENST00000578307 STAC3Q96MF2 364 aa13.1□□□□□ -0.31
BPTF-211ENST00000578307 ANO8Q9HCE9 1232 aaPredicted RBP13.1□□□□□ -0.31
BPTF-211ENST00000578307 KTN1Q86UP2 1357 aaKnown RBP13.1□□□□□ -0.31
BPTF-211ENST00000578307 CNGB1Q14028 1251 aaPredicted RBP13.1□□□□□ -0.31
BPTF-211ENST00000578307 ZBED9Q6R2W3 1325 aa13.09□□□□□ -0.31
BPTF-211ENST00000578307 COL17A1Q9UMD9 1497 aaPredicted RBP13.09□□□□□ -0.31
BPTF-211ENST00000578307 NEURL4Q96JN8 1562 aa13.08□□□□□ -0.32
BPTF-211ENST00000578307 BCANQ96GW7 911 aa13.08□□□□□ -0.32
BPTF-211ENST00000578307 KIF1BO60333 1816 aa13.07□□□□□ -0.32
BPTF-211ENST00000578307 EFCAB6Q5THR3 1501 aa13.07□□□□□ -0.32
BPTF-211ENST00000578307 POGZQ7Z3K3 1410 aa13.07□□□□□ -0.32
BPTF-211ENST00000578307 RALBP1Q15311 655 aa13.07□□□□□ -0.32
BPTF-211ENST00000578307 IQGAP1P46940 1657 aa13.07□□□□□ -0.32
BPTF-211ENST00000578307 HECW2Q9P2P5 1572 aa13.07□□□□□ -0.32
BPTF-211ENST00000578307 TMF1P82094 1093 aa13.06□□□□□ -0.32
BPTF-211ENST00000578307 TESK2Q96S53 571 aa13.06□□□□□ -0.32
BPTF-211ENST00000578307 MLH3Q9UHC1 1453 aa13.05□□□□□ -0.32
BPTF-211ENST00000578307 LMTK2Q8IWU2 1503 aa13.05□□□□□ -0.32
BPTF-211ENST00000578307 KIAA1210Q9ULL0 1709 aa13.05□□□□□ -0.32
BPTF-211ENST00000578307 PPRC1Q5VV67 1664 aaKnown RBP13.05□□□□□ -0.32
BPTF-211ENST00000578307 MYBBP1AQ9BQG0 1328 aaKnown RBP13.05□□□□□ -0.32
BPTF-211ENST00000578307 TMC1Q8TDI8 760 aa13.04□□□□□ -0.32
BPTF-211ENST00000578307 DISP3Q9P2K9 1392 aa13.04□□□□□ -0.32
BPTF-211ENST00000578307 BRD4O60885 1362 aaPredicted RBP13.04□□□□□ -0.32
BPTF-211ENST00000578307 NEO1Q92859 1461 aa13.03□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 95.2 ms