RNA–Protein interactions for RNA: ENST00000575379.1

CHRNB1-207, Transcript of cholinergic receptor nicotinic beta 1 subunit, humanhuman

TSL 2 BASIC

Gene CHRNB1, Length 1,095 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNB1-207ENST00000575379 KANK4Q5T7N3 995 aaPredicted RBP28.8■■■□□ 2.2
CHRNB1-207ENST00000575379 KDM5DQ9BY66 1539 aa28.79■■■□□ 2.2
CHRNB1-207ENST00000575379 PKD2Q13563 968 aa28.79■■■□□ 2.2
CHRNB1-207ENST00000575379 DNMT1P26358 1616 aaKnown RBP28.79■■■□□ 2.2
CHRNB1-207ENST00000575379 A2ML1A8K2U0 1454 aa28.78■■■□□ 2.2
CHRNB1-207ENST00000575379 WASHC2CQ9Y4E1 1318 aa28.77■■■□□ 2.2
CHRNB1-207ENST00000575379 TSPY4P0CV99 314 aa28.77■■■□□ 2.2
CHRNB1-207ENST00000575379 TSPY10P0CW01 314 aa28.77■■■□□ 2.2
CHRNB1-207ENST00000575379 TNRQ92752 1358 aa28.75■■■□□ 2.19
CHRNB1-207ENST00000575379 PZPP20742 1482 aa28.74■■■□□ 2.19
CHRNB1-207ENST00000575379 IQSEC2Q5JU85 1478 aa28.74■■■□□ 2.19
CHRNB1-207ENST00000575379 FAM135AQ9P2D6 1515 aa28.7■■■□□ 2.19
CHRNB1-207ENST00000575379 MAST1Q9Y2H9 1570 aa28.68■■■□□ 2.18
CHRNB1-207ENST00000575379 MAP3K1Q13233 1512 aa28.68■■■□□ 2.18
CHRNB1-207ENST00000575379 DISP3Q9P2K9 1392 aa28.67■■■□□ 2.18
CHRNB1-207ENST00000575379 POLR1AO95602 1720 aaPredicted RBP28.67■■■□□ 2.18
CHRNB1-207ENST00000575379 MYOM3Q5VTT5 1437 aa28.67■■■□□ 2.18
CHRNB1-207ENST00000575379 RNF17Q9BXT8 1623 aaKnown RBP28.65■■■□□ 2.18
CHRNB1-207ENST00000575379 NEURL4Q96JN8 1562 aa28.65■■■□□ 2.18
CHRNB1-207ENST00000575379 MIA2Q96PC5 1412 aa28.64■■■□□ 2.18
CHRNB1-207ENST00000575379 UBAP1LF5GYI3 381 aa28.63■■■□□ 2.17
CHRNB1-207ENST00000575379 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP28.62■■■□□ 2.17
CHRNB1-207ENST00000575379 ABCC3O15438 1527 aa28.62■■■□□ 2.17
CHRNB1-207ENST00000575379 NLRP1Q9C000 1473 aa28.59■■■□□ 2.17
CHRNB1-207ENST00000575379 UGGT1Q9NYU2 1555 aa28.58■■■□□ 2.17
CHRNB1-207ENST00000575379 EIF2AK4Q9P2K8 1649 aaKnown RBP28.58■■■□□ 2.17
CHRNB1-207ENST00000575379 ILDR2Q71H61 639 aa28.58■■■□□ 2.17
CHRNB1-207ENST00000575379 MROH1Q8NDA8 1641 aa28.58■■■□□ 2.17
CHRNB1-207ENST00000575379 ZC3H13Q5T200 1668 aaKnown RBP28.57■■■□□ 2.16
CHRNB1-207ENST00000575379 CEP152O94986 1710 aa28.56■■■□□ 2.16
CHRNB1-207ENST00000575379 CFAP65Q6ZU64 1925 aaKnown RBP28.56■■■□□ 2.16
CHRNB1-207ENST00000575379 THEMISQ8N1K5 641 aaPredicted RBP28.56■■■□□ 2.16
CHRNB1-207ENST00000575379 ANKLE2Q86XL3 938 aa28.55■■■□□ 2.16
CHRNB1-207ENST00000575379 SPATA31D1Q6ZQQ2 1576 aa28.54■■■□□ 2.16
CHRNB1-207ENST00000575379 DUOX2Q9NRD8 1548 aa28.53■■■□□ 2.16
CHRNB1-207ENST00000575379 ERVK-7P63135 1459 aa28.52■■■□□ 2.16
CHRNB1-207ENST00000575379 CROCC2H7BZ55 1655 aa28.51■■■□□ 2.16
CHRNB1-207ENST00000575379 PTPN23Q9H3S7 1636 aa28.51■■■□□ 2.15
CHRNB1-207ENST00000575379 SHANK2Q9UPX8 1470 aa28.51■■■□□ 2.15
CHRNB1-207ENST00000575379 APLP2Q06481 763 aa28.5■■■□□ 2.15
CHRNB1-207ENST00000575379 ABCC5O15440 1437 aa28.5■■■□□ 2.15
CHRNB1-207ENST00000575379 KIF15Q9NS87 1388 aa28.49■■■□□ 2.15
CHRNB1-207ENST00000575379 RRP7BPQ9NSQ0 103 aa28.48■■■□□ 2.15
CHRNB1-207ENST00000575379 NPHP4O75161 1426 aaPredicted RBP28.48■■■□□ 2.15
CHRNB1-207ENST00000575379 VWDEQ8N2E2 1590 aa28.48■■■□□ 2.15
CHRNB1-207ENST00000575379 CPS1P31327 1500 aa28.47■■■□□ 2.15
CHRNB1-207ENST00000575379 DEPDC5O75140 1603 aa28.47■■■□□ 2.15
CHRNB1-207ENST00000575379 MED14O60244 1454 aa28.46■■■□□ 2.15
CHRNB1-207ENST00000575379 IQGAP1P46940 1657 aa28.45■■■□□ 2.14
CHRNB1-207ENST00000575379 SCAF1Q9H7N4 1312 aaKnown RBP28.44■■■□□ 2.14
CHRNB1-207ENST00000575379 PIP4K2BP78356 416 aa28.43■■■□□ 2.14
CHRNB1-207ENST00000575379 DAPK1P53355 1430 aa28.43■■■□□ 2.14
CHRNB1-207ENST00000575379 GRWD1Q9BQ67 446 aaKnown RBP eCLIP28.42■■■□□ 2.14
CHRNB1-207ENST00000575379 PRDM15P57071 1507 aaPredicted RBP28.42■■■□□ 2.14
CHRNB1-207ENST00000575379 FGD6Q6ZV73 1430 aa28.42■■■□□ 2.14
CHRNB1-207ENST00000575379 ERBINQ96RT1 1412 aa28.41■■■□□ 2.14
CHRNB1-207ENST00000575379 UBR1Q8IWV7 1749 aa28.4■■■□□ 2.14
CHRNB1-207ENST00000575379 CHIC2Q9UKJ5 165 aa28.39■■■□□ 2.14
CHRNB1-207ENST00000575379 STRCP1A6NGW2 1772 aa28.37■■■□□ 2.13
CHRNB1-207ENST00000575379 TOM1O60784 492 aa28.35■■■□□ 2.13
CHRNB1-207ENST00000575379 HSPA1LP34931 641 aa28.34■■■□□ 2.13
CHRNB1-207ENST00000575379 ARHGAP31Q2M1Z3 1444 aa28.33■■■□□ 2.13
CHRNB1-207ENST00000575379 SOCS7O14512 581 aa28.32■■■□□ 2.12
CHRNB1-207ENST00000575379 SCAF11Q99590 1463 aaKnown RBP28.3■■■□□ 2.12
CHRNB1-207ENST00000575379 ANKRD30AQ9BXX3 1397 aa28.3■■■□□ 2.12
CHRNB1-207ENST00000575379 LTKP29376 864 aa28.3■■■□□ 2.12
CHRNB1-207ENST00000575379 ALKQ9UM73 1620 aa28.29■■■□□ 2.12
CHRNB1-207ENST00000575379 PIK3C2BO00750 1634 aa28.29■■■□□ 2.12
CHRNB1-207ENST00000575379 KANK1Q14678 1352 aa28.28■■■□□ 2.12
CHRNB1-207ENST00000575379 LRRC7Q96NW7 1537 aa28.28■■■□□ 2.12
CHRNB1-207ENST00000575379 TXNDC2Q86VQ3 553 aa28.27■■■□□ 2.12
CHRNB1-207ENST00000575379 ARHGAP23Q9P227 1491 aa28.27■■■□□ 2.12
CHRNB1-207ENST00000575379 SLIT1O75093 1534 aa28.26■■■□□ 2.11
CHRNB1-207ENST00000575379 FAM50AQ14320 339 aaKnown RBP28.24■■■□□ 2.11
CHRNB1-207ENST00000575379 SENP3Q9H4L4 574 aaPredicted RBP28.23■■■□□ 2.11
CHRNB1-207ENST00000575379 SYNMO15061 1565 aa28.22■■■□□ 2.11
CHRNB1-207ENST00000575379 STAG3Q9UJ98 1225 aa28.21■■■□□ 2.11
CHRNB1-207ENST00000575379 LMTK2Q8IWU2 1503 aa28.21■■■□□ 2.11
CHRNB1-207ENST00000575379 EID1Q9Y6B2 187 aa28.2■■■□□ 2.1
CHRNB1-207ENST00000575379 IDI1Q13907 227 aa28.18■■■□□ 2.1
CHRNB1-207ENST00000575379 TMEM2Q9UHN6 1383 aa28.18■■■□□ 2.1
CHRNB1-207ENST00000575379 MED1Q15648 1581 aaPredicted RBP28.18■■■□□ 2.1
CHRNB1-207ENST00000575379 ADGRL2O95490 1459 aa28.17■■■□□ 2.1
CHRNB1-207ENST00000575379 EFCAB6Q5THR3 1501 aa28.17■■■□□ 2.1
CHRNB1-207ENST00000575379 XIRP1Q702N8 1843 aaKnown RBP28.13■■■□□ 2.09
CHRNB1-207ENST00000575379 KDM5AP29375 1690 aaKnown RBP28.12■■■□□ 2.09
CHRNB1-207ENST00000575379 NOS1P29475 1434 aa28.11■■■□□ 2.09
CHRNB1-207ENST00000575379 ANKRD50Q9ULJ7 1429 aa28.1■■■□□ 2.09
CHRNB1-207ENST00000575379 ADGRB3O60242 1522 aa28.08■■■□□ 2.08
CHRNB1-207ENST00000575379 SLC26A8Q96RN1 970 aa28.07■■■□□ 2.08
CHRNB1-207ENST00000575379 TET3O43151 1660 aa28.03■■■□□ 2.08
CHRNB1-207ENST00000575379 MYO5BQ9ULV0 1848 aa28.02■■■□□ 2.08
CHRNB1-207ENST00000575379 RBM33Q96EV2 1170 aaKnown RBP28.02■■■□□ 2.08
CHRNB1-207ENST00000575379 SLC52A1Q9NWF4 448 aa28.01■■■□□ 2.07
CHRNB1-207ENST00000575379 RPRD2Q5VT52 1461 aaKnown RBP28■■■□□ 2.07
CHRNB1-207ENST00000575379 TMEM94Q12767 1356 aa27.99■■■□□ 2.07
CHRNB1-207ENST00000575379 BCANQ96GW7 911 aa27.99■■■□□ 2.07
CHRNB1-207ENST00000575379 GCC2Q8IWJ2 1684 aa27.98■■■□□ 2.07
CHRNB1-207ENST00000575379 KCNA6P17658 529 aa27.98■■■□□ 2.07
CHRNB1-207ENST00000575379 PHF23Q9BUL5 403 aaPredicted RBP27.98■■■□□ 2.07
Retrieved 100 of 20,778 RNA–protein pairs in 17.4 ms