RNA–Protein interactions for RNA: ENST00000574226.5

TVP23B-206, Transcript of trans-golgi network vesicle protein 23 homolog B, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene TVP23B, Length 1,080 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TVP23B-206ENST00000574226 WASHC2CQ9Y4E1 1318 aa25.61■■□□□ 1.69
TVP23B-206ENST00000574226 DUOX2Q9NRD8 1548 aa25.6■■□□□ 1.69
TVP23B-206ENST00000574226 DNMT1P26358 1616 aaKnown RBP25.59■■□□□ 1.69
TVP23B-206ENST00000574226 RNF17Q9BXT8 1623 aaKnown RBP25.59■■□□□ 1.69
TVP23B-206ENST00000574226 ABCC5O15440 1437 aa25.58■■□□□ 1.69
TVP23B-206ENST00000574226 STRCQ7RTU9 1775 aa25.57■■□□□ 1.68
TVP23B-206ENST00000574226 DAPK1P53355 1430 aa25.56■■□□□ 1.68
TVP23B-206ENST00000574226 ILDR1Q86SU0 546 aaPredicted RBP25.56■■□□□ 1.68
TVP23B-206ENST00000574226 ZNF142P52746 1687 aaPredicted RBP25.55■■□□□ 1.68
TVP23B-206ENST00000574226 MYO3AQ8NEV4 1616 aa25.55■■□□□ 1.68
TVP23B-206ENST00000574226 ZC3H13Q5T200 1668 aaKnown RBP25.55■■□□□ 1.68
TVP23B-206ENST00000574226 PZPP20742 1482 aa25.54■■□□□ 1.68
TVP23B-206ENST00000574226 KIF15Q9NS87 1388 aa25.54■■□□□ 1.68
TVP23B-206ENST00000574226 PTPRTO14522 1441 aa25.53■■□□□ 1.68
TVP23B-206ENST00000574226 ERBINQ96RT1 1412 aa25.52■■□□□ 1.68
TVP23B-206ENST00000574226 CEP170BQ9Y4F5 1589 aaPredicted RBP25.52■■□□□ 1.68
TVP23B-206ENST00000574226 ANKRD30AQ9BXX3 1397 aa25.51■■□□□ 1.67
TVP23B-206ENST00000574226 NCOA1Q15788 1441 aa25.51■■□□□ 1.67
TVP23B-206ENST00000574226 CAMSAP1Q5T5Y3 1602 aa25.48■■□□□ 1.67
TVP23B-206ENST00000574226 PLA2R1Q13018 1463 aa25.48■■□□□ 1.67
TVP23B-206ENST00000574226 TNRQ92752 1358 aa25.48■■□□□ 1.67
TVP23B-206ENST00000574226 FBXO41Q8TF61 875 aa25.48■■□□□ 1.67
TVP23B-206ENST00000574226 A2ML1A8K2U0 1454 aa25.47■■□□□ 1.67
TVP23B-206ENST00000574226 RRP7BPQ9NSQ0 103 aa25.47■■□□□ 1.67
TVP23B-206ENST00000574226 ABCC3O15438 1527 aa25.47■■□□□ 1.67
TVP23B-206ENST00000574226 PKD2Q13563 968 aa25.45■■□□□ 1.66
TVP23B-206ENST00000574226 FAM50AQ14320 339 aaKnown RBP25.44■■□□□ 1.66
TVP23B-206ENST00000574226 MROH1Q8NDA8 1641 aa25.44■■□□□ 1.66
TVP23B-206ENST00000574226 FBXO31Q5XUX0 539 aaPredicted RBP25.43■■□□□ 1.66
TVP23B-206ENST00000574226 PRDM15P57071 1507 aaPredicted RBP25.42■■□□□ 1.66
TVP23B-206ENST00000574226 ADGRL2O95490 1459 aa25.42■■□□□ 1.66
TVP23B-206ENST00000574226 NLRP1Q9C000 1473 aa25.42■■□□□ 1.66
TVP23B-206ENST00000574226 CERKQ8TCT0 537 aa25.4■■□□□ 1.66
TVP23B-206ENST00000574226 KANK1Q14678 1352 aa25.4■■□□□ 1.66
TVP23B-206ENST00000574226 DEPDC5O75140 1603 aa25.39■■□□□ 1.66
TVP23B-206ENST00000574226 CHIC2Q9UKJ5 165 aa25.39■■□□□ 1.66
TVP23B-206ENST00000574226 CEP152O94986 1710 aa25.37■■□□□ 1.65
TVP23B-206ENST00000574226 ARHGAP31Q2M1Z3 1444 aa25.37■■□□□ 1.65
TVP23B-206ENST00000574226 SPATA31D1Q6ZQQ2 1576 aa25.36■■□□□ 1.65
TVP23B-206ENST00000574226 THEMISQ8N1K5 641 aaPredicted RBP25.36■■□□□ 1.65
TVP23B-206ENST00000574226 NCKAP5LQ9HCH0 1330 aa25.34■■□□□ 1.65
TVP23B-206ENST00000574226 ERVK-7P63135 1459 aa25.34■■□□□ 1.65
TVP23B-206ENST00000574226 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP25.32■■□□□ 1.64
TVP23B-206ENST00000574226 UGGT1Q9NYU2 1555 aa25.31■■□□□ 1.64
TVP23B-206ENST00000574226 GRWD1Q9BQ67 446 aaKnown RBP eCLIP25.3■■□□□ 1.64
TVP23B-206ENST00000574226 ANKRD50Q9ULJ7 1429 aa25.29■■□□□ 1.64
TVP23B-206ENST00000574226 LMTK2Q8IWU2 1503 aa25.29■■□□□ 1.64
TVP23B-206ENST00000574226 POLR1AO95602 1720 aaPredicted RBP25.29■■□□□ 1.64
TVP23B-206ENST00000574226 CFAP65Q6ZU64 1925 aaKnown RBP25.28■■□□□ 1.64
TVP23B-206ENST00000574226 ROCK1Q13464 1354 aa25.28■■□□□ 1.64
TVP23B-206ENST00000574226 VWDEQ8N2E2 1590 aa25.27■■□□□ 1.64
TVP23B-206ENST00000574226 ANKLE2Q86XL3 938 aa25.27■■□□□ 1.64
TVP23B-206ENST00000574226 IQSEC2Q5JU85 1478 aa25.25■■□□□ 1.63
TVP23B-206ENST00000574226 LTBP4Q8N2S1 1624 aa25.24■■□□□ 1.63
TVP23B-206ENST00000574226 EFCAB6Q5THR3 1501 aa25.19■■□□□ 1.62
TVP23B-206ENST00000574226 MED14O60244 1454 aa25.19■■□□□ 1.62
TVP23B-206ENST00000574226 NEURL4Q96JN8 1562 aa25.18■■□□□ 1.62
TVP23B-206ENST00000574226 UBR1Q8IWV7 1749 aa25.17■■□□□ 1.62
TVP23B-206ENST00000574226 RPRD2Q5VT52 1461 aaKnown RBP25.17■■□□□ 1.62
TVP23B-206ENST00000574226 PPARGC1BQ86YN6 1023 aaKnown RBP25.17■■□□□ 1.62
TVP23B-206ENST00000574226 KDM5AP29375 1690 aaKnown RBP25.16■■□□□ 1.62
TVP23B-206ENST00000574226 ZNF335Q9H4Z2 1342 aaPredicted RBP25.15■■□□□ 1.62
TVP23B-206ENST00000574226 UNC13BO14795 1591 aa25.14■■□□□ 1.61
TVP23B-206ENST00000574226 NPHP4O75161 1426 aaPredicted RBP25.13■■□□□ 1.61
TVP23B-206ENST00000574226 RRBP1Q9P2E9 1410 aaKnown RBP25.13■■□□□ 1.61
TVP23B-206ENST00000574226 TET3O43151 1660 aa25.13■■□□□ 1.61
TVP23B-206ENST00000574226 SLC52A1Q9NWF4 448 aa25.12■■□□□ 1.61
TVP23B-206ENST00000574226 NOS1P29475 1434 aa25.12■■□□□ 1.61
TVP23B-206ENST00000574226 SLIT1O75093 1534 aa25.11■■□□□ 1.61
TVP23B-206ENST00000574226 IQGAP1P46940 1657 aa25.1■■□□□ 1.61
TVP23B-206ENST00000574226 ITGAEP38570 1179 aa25.1■■□□□ 1.61
TVP23B-206ENST00000574226 STAG3Q9UJ98 1225 aa25.1■■□□□ 1.61
TVP23B-206ENST00000574226 GCC2Q8IWJ2 1684 aa25.1■■□□□ 1.61
TVP23B-206ENST00000574226 ARHGAP23Q9P227 1491 aa25.09■■□□□ 1.61
TVP23B-206ENST00000574226 PIK3C2BO00750 1634 aa25.09■■□□□ 1.61
TVP23B-206ENST00000574226 EID1Q9Y6B2 187 aa25.09■■□□□ 1.61
TVP23B-206ENST00000574226 CPS1P31327 1500 aa25.08■■□□□ 1.61
TVP23B-206ENST00000574226 SCAF11Q99590 1463 aaKnown RBP25.08■■□□□ 1.6
TVP23B-206ENST00000574226 IDI1Q13907 227 aa25.07■■□□□ 1.6
TVP23B-206ENST00000574226 SYNMO15061 1565 aa25.06■■□□□ 1.6
TVP23B-206ENST00000574226 IQGAP3Q86VI3 1631 aa25.05■■□□□ 1.6
TVP23B-206ENST00000574226 TMEM2Q9UHN6 1383 aa25.05■■□□□ 1.6
TVP23B-206ENST00000574226 TXNDC2Q86VQ3 553 aa25.04■■□□□ 1.6
TVP23B-206ENST00000574226 NUP155O75694 1391 aa25.02■■□□□ 1.6
TVP23B-206ENST00000574226 ADGRB3O60242 1522 aa25.01■■□□□ 1.59
TVP23B-206ENST00000574226 LTKP29376 864 aa24.99■■□□□ 1.59
TVP23B-206ENST00000574226 E9PCH4 1651 aa24.97■■□□□ 1.59
TVP23B-206ENST00000574226 HDGFP51858 240 aaKnown RBP24.96■■□□□ 1.59
TVP23B-206ENST00000574226 UBAP1LF5GYI3 381 aa24.94■■□□□ 1.58
TVP23B-206ENST00000574226 NAIPQ13075 1403 aa24.92■■□□□ 1.58
TVP23B-206ENST00000574226 TOM1O60784 492 aa24.9■■□□□ 1.58
TVP23B-206ENST00000574226 HFM1A2PYH4 1435 aa24.89■■□□□ 1.58
TVP23B-206ENST00000574226 TMEM131LA2VDJ0 1609 aa24.89■■□□□ 1.57
TVP23B-206ENST00000574226 ABCF1Q8NE71 845 aaKnown RBP eCLIP24.86■■□□□ 1.57
TVP23B-206ENST00000574226 STRCP1A6NGW2 1772 aa24.85■■□□□ 1.57
TVP23B-206ENST00000574226 MYO5BQ9ULV0 1848 aa24.85■■□□□ 1.57
TVP23B-206ENST00000574226 ZFYVE9O95405 1425 aa24.85■■□□□ 1.57
TVP23B-206ENST00000574226 LRRC7Q96NW7 1537 aa24.84■■□□□ 1.57
TVP23B-206ENST00000574226 RIMS2Q9UQ26 1411 aa24.83■■□□□ 1.57
TVP23B-206ENST00000574226 SPHKAPQ2M3C7 1700 aa24.83■■□□□ 1.57
Retrieved 100 of 20,778 RNA–protein pairs in 16.4 ms