RNA–Protein interactions for RNA: ENST00000574226.5

TVP23B-206, Transcript of trans-golgi network vesicle protein 23 homolog B, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene TVP23B, Length 1,080 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TVP23B-206ENST00000574226 NISCHQ9Y2I1 1504 aa40.6■■■■■ 4.09
TVP23B-206ENST00000574226 CCDC180Q9P1Z9 1646 aa36.33■■■■□ 3.41
TVP23B-206ENST00000574226 ABCC9O60706 1549 aa35.76■■■■□ 3.31
TVP23B-206ENST00000574226 RB1CC1Q8TDY2 1594 aa34.36■■■■□ 3.09
TVP23B-206ENST00000574226 NACADO15069 1562 aa34.24■■■■□ 3.07
TVP23B-206ENST00000574226 DCAF8L2P0C7V8 631 aa34.01■■■■□ 3.03
TVP23B-206ENST00000574226 MYO15BQ96JP2 1530 aa33.97■■■■□ 3.03
TVP23B-206ENST00000574226 ZCCHC6Q5VYS8 1495 aaKnown RBP33.73■■■□□ 2.99
TVP23B-206ENST00000574226 DCAF1Q9Y4B6 1507 aa33.66■■■□□ 2.98
TVP23B-206ENST00000574226 UNC13AQ9UPW8 1703 aa33.49■■■□□ 2.95
TVP23B-206ENST00000574226 PABPN1Q86U42 306 aaKnown RBP eCLIP33.32■■■□□ 2.92
TVP23B-206ENST00000574226 BICRAQ9NZM4 1560 aa33.24■■■□□ 2.91
TVP23B-206ENST00000574226 DNAJC5BQ9UF47 199 aa33.09■■■□□ 2.89
TVP23B-206ENST00000574226 SHROOM4Q9ULL8 1493 aa33.04■■■□□ 2.88
TVP23B-206ENST00000574226 SCRIBQ14160 1630 aa32.98■■■□□ 2.87
TVP23B-206ENST00000574226 EIF4G1Q04637 1599 aaKnown RBP32.42■■■□□ 2.78
TVP23B-206ENST00000574226 CC2D2AQ9P2K1 1620 aa32.37■■■□□ 2.77
TVP23B-206ENST00000574226 CECR2Q9BXF3 1484 aa32.23■■■□□ 2.75
TVP23B-206ENST00000574226 NCAPD3P42695 1498 aa31.59■■■□□ 2.65
TVP23B-206ENST00000574226 SMARCA4P51532 1647 aa31.57■■■□□ 2.64
TVP23B-206ENST00000574226 BAZ1AQ9NRL2 1556 aaPredicted RBP31.54■■■□□ 2.64
TVP23B-206ENST00000574226 SMARCA2P51531 1590 aa31.51■■■□□ 2.63
TVP23B-206ENST00000574226 ATAD2BQ9ULI0 1458 aa31.49■■■□□ 2.63
TVP23B-206ENST00000574226 HMGXB3Q12766 1538 aa31.4■■■□□ 2.62
TVP23B-206ENST00000574226 PEG3Q9GZU2 1588 aa31.32■■■□□ 2.6
TVP23B-206ENST00000574226 BAZ1BQ9UIG0 1483 aaKnown RBP31.24■■■□□ 2.59
TVP23B-206ENST00000574226 MROH2BQ7Z745 1585 aa31.22■■■□□ 2.59
TVP23B-206ENST00000574226 ERCC6Q03468 1493 aa30.92■■■□□ 2.54
TVP23B-206ENST00000574226 WIZO95785 1651 aa30.86■■■□□ 2.53
TVP23B-206ENST00000574226 LAMC3Q9Y6N6 1575 aa30.83■■■□□ 2.53
TVP23B-206ENST00000574226 NESP48681 1621 aa30.8■■■□□ 2.52
TVP23B-206ENST00000574226 CUX2O14529 1486 aa30.78■■■□□ 2.52
TVP23B-206ENST00000574226 RSF1Q96T23 1441 aaPredicted RBP30.76■■■□□ 2.51
TVP23B-206ENST00000574226 PDS5BQ9NTI5 1447 aa30.64■■■□□ 2.49
TVP23B-206ENST00000574226 CADPSQ9ULU8 1353 aa30.63■■■□□ 2.49
TVP23B-206ENST00000574226 TOP2AP11388 1531 aaKnown RBP30.57■■■□□ 2.49
TVP23B-206ENST00000574226 THOC2Q8NI27 1593 aaKnown RBP30.48■■■□□ 2.47
TVP23B-206ENST00000574226 KIF21AQ7Z4S6 1674 aa30.48■■■□□ 2.47
TVP23B-206ENST00000574226 CFTRP13569 1480 aa30.36■■■□□ 2.45
TVP23B-206ENST00000574226 MRC2Q9UBG0 1479 aa30.3■■■□□ 2.44
TVP23B-206ENST00000574226 CEP164Q9UPV0 1460 aa30.27■■■□□ 2.44
TVP23B-206ENST00000574226 FANCD2Q9BXW9 1451 aa30.25■■■□□ 2.43
TVP23B-206ENST00000574226 DNAJC5Q9H3Z4 198 aa30.23■■■□□ 2.43
TVP23B-206ENST00000574226 WDR62O43379 1518 aa30.21■■■□□ 2.43
TVP23B-206ENST00000574226 CCDC88BA6NC98 1476 aa30.19■■■□□ 2.42
TVP23B-206ENST00000574226 PRDM2Q13029 1718 aa30.13■■■□□ 2.41
TVP23B-206ENST00000574226 URB2Q14146 1524 aaKnown RBP29.93■■■□□ 2.38
TVP23B-206ENST00000574226 ABCC8Q09428 1581 aa29.81■■■□□ 2.36
TVP23B-206ENST00000574226 TOPBP1Q92547 1522 aa29.71■■■□□ 2.35
TVP23B-206ENST00000574226 DNMBPQ6XZF7 1577 aa29.68■■■□□ 2.34
TVP23B-206ENST00000574226 IFT140Q96RY7 1462 aa29.67■■■□□ 2.34
TVP23B-206ENST00000574226 SUPT5HO00267 1087 aaKnown RBP29.65■■■□□ 2.34
TVP23B-206ENST00000574226 ZNF608Q9ULD9 1512 aaPredicted RBP29.45■■■□□ 2.31
TVP23B-206ENST00000574226 OSCARQ8IYS5 282 aa29.44■■■□□ 2.3
TVP23B-206ENST00000574226 POLA1P09884 1462 aaPredicted RBP29.43■■■□□ 2.3
TVP23B-206ENST00000574226 TARBP1Q13395 1621 aaKnown RBP29.42■■■□□ 2.3
TVP23B-206ENST00000574226 EIF4G3O43432 1585 aaKnown RBP29.37■■■□□ 2.29
TVP23B-206ENST00000574226 SOGA1O94964 1423 aa29.33■■■□□ 2.29
TVP23B-206ENST00000574226 CUX1P39880 1505 aa29.32■■■□□ 2.28
TVP23B-206ENST00000574226 FGD5Q6ZNL6 1462 aa29.3■■■□□ 2.28
TVP23B-206ENST00000574226 WDR97A6NE52 1622 aa29.29■■■□□ 2.28
TVP23B-206ENST00000574226 AQRO60306 1485 aaKnown RBP eCLIP29.26■■■□□ 2.27
TVP23B-206ENST00000574226 RAD54L2Q9Y4B4 1467 aa29.25■■■□□ 2.27
TVP23B-206ENST00000574226 TDRD9Q8NDG6 1382 aaKnown RBP29.16■■■□□ 2.26
TVP23B-206ENST00000574226 CHD1O14646 1710 aa29.07■■■□□ 2.24
TVP23B-206ENST00000574226 GRIN2BQ13224 1484 aa29.05■■■□□ 2.24
TVP23B-206ENST00000574226 WRNQ14191 1432 aaPredicted RBP eCLIP29.05■■■□□ 2.24
TVP23B-206ENST00000574226 ABCA10Q8WWZ4 1543 aa29.04■■■□□ 2.24
TVP23B-206ENST00000574226 MAGI1Q96QZ7 1491 aaPredicted RBP29.04■■■□□ 2.24
TVP23B-206ENST00000574226 TOP2BQ02880 1626 aa29.03■■■□□ 2.24
TVP23B-206ENST00000574226 BIVM-ERCC5R4GMW8 1640 aa29.03■■■□□ 2.24
TVP23B-206ENST00000574226 FBLN2P98095 1184 aa29.01■■■□□ 2.23
TVP23B-206ENST00000574226 SNAPC4Q5SXM2 1469 aa29■■■□□ 2.23
TVP23B-206ENST00000574226 GAPVD1Q14C86 1478 aa28.99■■■□□ 2.23
TVP23B-206ENST00000574226 TRIM41Q8WV44 630 aa28.99■■■□□ 2.23
TVP23B-206ENST00000574226 PBRM1Q86U86 1689 aa28.93■■■□□ 2.22
TVP23B-206ENST00000574226 CHMP7Q8WUX9 453 aaPredicted RBP28.93■■■□□ 2.22
TVP23B-206ENST00000574226 ABCA5Q8WWZ7 1642 aa28.93■■■□□ 2.22
TVP23B-206ENST00000574226 SYNJ1O43426 1573 aa28.92■■■□□ 2.22
TVP23B-206ENST00000574226 RIMBP3CA6NJZ7 1639 aa28.92■■■□□ 2.22
TVP23B-206ENST00000574226 RIMBP3BA6NNM3 1639 aa28.92■■■□□ 2.22
TVP23B-206ENST00000574226 RIMBP3Q9UFD9 1639 aa28.92■■■□□ 2.22
TVP23B-206ENST00000574226 SYNJ2O15056 1496 aa28.91■■■□□ 2.22
TVP23B-206ENST00000574226 ARHGEF11O15085 1522 aa28.89■■■□□ 2.22
TVP23B-206ENST00000574226 CLASP1Q7Z460 1538 aa28.76■■■□□ 2.19
TVP23B-206ENST00000574226 ERICH3Q5RHP9 1530 aa28.72■■■□□ 2.19
TVP23B-206ENST00000574226 ADAMTS12P58397 1594 aa28.67■■■□□ 2.18
TVP23B-206ENST00000574226 FHAD1B1AJZ9 1412 aa28.67■■■□□ 2.18
TVP23B-206ENST00000574226 GRIN2AQ12879 1464 aa28.66■■■□□ 2.18
TVP23B-206ENST00000574226 CYB5RLQ6IPT4 315 aa28.64■■■□□ 2.18
TVP23B-206ENST00000574226 ARAP1Q96P48 1450 aa28.6■■■□□ 2.17
TVP23B-206ENST00000574226 NUP160Q12769 1436 aa28.55■■■□□ 2.16
TVP23B-206ENST00000574226 KIF27Q86VH2 1401 aa28.52■■■□□ 2.16
TVP23B-206ENST00000574226 CEP170Q5SW79 1584 aa28.48■■■□□ 2.15
TVP23B-206ENST00000574226 CUL7Q14999 1698 aa28.39■■■□□ 2.14
TVP23B-206ENST00000574226 IGF1RP08069 1367 aa28.38■■■□□ 2.13
TVP23B-206ENST00000574226 SHROOM2Q13796 1616 aa28.38■■■□□ 2.13
TVP23B-206ENST00000574226 AEBP2Q6ZN18 517 aaPredicted RBP28.35■■■□□ 2.13
TVP23B-206ENST00000574226 JPH4Q96JJ6 628 aa28.26■■■□□ 2.11
TVP23B-206ENST00000574226 RUSC2Q8N2Y8 1516 aa28.26■■■□□ 2.11
Retrieved 100 of 20,778 RNA–protein pairs in 23.8 ms