RNA–Protein interactions for RNA: ENST00000572053.5

ABCC1-203, Transcript of ATP binding cassette subfamily C member 1, humanhuman

TSL 3

Gene ABCC1, Length 744 nt, Biotype nonsense mediated decay, Subcellular localisation Mitochondria .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABCC1-203ENST00000572053 TSPY4P0CV99 314 aa18.46■□□□□ 0.55
ABCC1-203ENST00000572053 TSPY10P0CW01 314 aa18.46■□□□□ 0.55
ABCC1-203ENST00000572053 A2ML1A8K2U0 1454 aa18.46■□□□□ 0.54
ABCC1-203ENST00000572053 TCOF1Q13428 1488 aaKnown RBP18.46■□□□□ 0.54
ABCC1-203ENST00000572053 NCKAP5LQ9HCH0 1330 aa18.45■□□□□ 0.54
ABCC1-203ENST00000572053 PZPP20742 1482 aa18.45■□□□□ 0.54
ABCC1-203ENST00000572053 TNRQ92752 1358 aa18.42■□□□□ 0.54
ABCC1-203ENST00000572053 LOC105371045A0A1W2PR82 267 aa18.42■□□□□ 0.54
ABCC1-203ENST00000572053 WASHC2CQ9Y4E1 1318 aa18.42■□□□□ 0.54
ABCC1-203ENST00000572053 MAST1Q9Y2H9 1570 aa18.42■□□□□ 0.54
ABCC1-203ENST00000572053 DNMT1P26358 1616 aaKnown RBP18.41■□□□□ 0.54
ABCC1-203ENST00000572053 MIA2Q96PC5 1412 aa18.4■□□□□ 0.54
ABCC1-203ENST00000572053 MYOM3Q5VTT5 1437 aa18.4■□□□□ 0.54
ABCC1-203ENST00000572053 RNF17Q9BXT8 1623 aaKnown RBP18.38■□□□□ 0.53
ABCC1-203ENST00000572053 ZNF335Q9H4Z2 1342 aaPredicted RBP18.38■□□□□ 0.53
ABCC1-203ENST00000572053 EIF2AK4Q9P2K8 1649 aaKnown RBP18.38■□□□□ 0.53
ABCC1-203ENST00000572053 ZC3H13Q5T200 1668 aaKnown RBP18.38■□□□□ 0.53
ABCC1-203ENST00000572053 NLRP1Q9C000 1473 aa18.37■□□□□ 0.53
ABCC1-203ENST00000572053 POLR1AO95602 1720 aaPredicted RBP18.36■□□□□ 0.53
ABCC1-203ENST00000572053 FBXO31Q5XUX0 539 aaPredicted RBP18.36■□□□□ 0.53
ABCC1-203ENST00000572053 KANK4Q5T7N3 995 aaPredicted RBP18.35■□□□□ 0.53
ABCC1-203ENST00000572053 ABCC3O15438 1527 aa18.33■□□□□ 0.52
ABCC1-203ENST00000572053 APLP2Q06481 763 aa18.32■□□□□ 0.52
ABCC1-203ENST00000572053 UGGT1Q9NYU2 1555 aa18.32■□□□□ 0.52
ABCC1-203ENST00000572053 DUOX2Q9NRD8 1548 aa18.32■□□□□ 0.52
ABCC1-203ENST00000572053 NEURL4Q96JN8 1562 aa18.31■□□□□ 0.52
ABCC1-203ENST00000572053 THEMISQ8N1K5 641 aaPredicted RBP18.31■□□□□ 0.52
ABCC1-203ENST00000572053 SHANK2Q9UPX8 1470 aa18.31■□□□□ 0.52
ABCC1-203ENST00000572053 DISP3Q9P2K9 1392 aa18.3■□□□□ 0.52
ABCC1-203ENST00000572053 SPATA31D1Q6ZQQ2 1576 aa18.3■□□□□ 0.52
ABCC1-203ENST00000572053 ANKLE2Q86XL3 938 aa18.29■□□□□ 0.52
ABCC1-203ENST00000572053 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP18.29■□□□□ 0.52
ABCC1-203ENST00000572053 CPS1P31327 1500 aa18.28■□□□□ 0.52
ABCC1-203ENST00000572053 MROH1Q8NDA8 1641 aa18.28■□□□□ 0.52
ABCC1-203ENST00000572053 UBAP1LF5GYI3 381 aa18.28■□□□□ 0.52
ABCC1-203ENST00000572053 CROCC2H7BZ55 1655 aa18.28■□□□□ 0.52
ABCC1-203ENST00000572053 DEPDC5O75140 1603 aa18.27■□□□□ 0.52
ABCC1-203ENST00000572053 ERVK-7P63135 1459 aa18.27■□□□□ 0.52
ABCC1-203ENST00000572053 KIF15Q9NS87 1388 aa18.27■□□□□ 0.51
ABCC1-203ENST00000572053 PTPN23Q9H3S7 1636 aa18.27■□□□□ 0.51
ABCC1-203ENST00000572053 ERBINQ96RT1 1412 aa18.26■□□□□ 0.51
ABCC1-203ENST00000572053 MED14O60244 1454 aa18.26■□□□□ 0.51
ABCC1-203ENST00000572053 PRDM15P57071 1507 aaPredicted RBP18.25■□□□□ 0.51
ABCC1-203ENST00000572053 NPHP4O75161 1426 aaPredicted RBP18.24■□□□□ 0.51
ABCC1-203ENST00000572053 CEP152O94986 1710 aa18.24■□□□□ 0.51
ABCC1-203ENST00000572053 ABCC5O15440 1437 aa18.23■□□□□ 0.51
ABCC1-203ENST00000572053 FGD6Q6ZV73 1430 aa18.23■□□□□ 0.51
ABCC1-203ENST00000572053 DAPK1P53355 1430 aa18.22■□□□□ 0.51
ABCC1-203ENST00000572053 IQGAP1P46940 1657 aa18.21■□□□□ 0.51
ABCC1-203ENST00000572053 VWDEQ8N2E2 1590 aa18.21■□□□□ 0.51
ABCC1-203ENST00000572053 ARHGAP31Q2M1Z3 1444 aa18.2■□□□□ 0.5
ABCC1-203ENST00000572053 RRP7BPQ9NSQ0 103 aa18.19■□□□□ 0.5
ABCC1-203ENST00000572053 KANK1Q14678 1352 aa18.18■□□□□ 0.5
ABCC1-203ENST00000572053 ANKRD30AQ9BXX3 1397 aa18.17■□□□□ 0.5
ABCC1-203ENST00000572053 TOM1O60784 492 aa18.17■□□□□ 0.5
ABCC1-203ENST00000572053 UBR1Q8IWV7 1749 aa18.17■□□□□ 0.5
ABCC1-203ENST00000572053 SCAF11Q99590 1463 aaKnown RBP18.15■□□□□ 0.5
ABCC1-203ENST00000572053 SCAF1Q9H7N4 1312 aaKnown RBP18.15■□□□□ 0.5
ABCC1-203ENST00000572053 SYNMO15061 1565 aa18.14■□□□□ 0.49
ABCC1-203ENST00000572053 ILDR2Q71H61 639 aa18.13■□□□□ 0.49
ABCC1-203ENST00000572053 GRWD1Q9BQ67 446 aaKnown RBP eCLIP18.13■□□□□ 0.493e-10■■□□□ 12.1
ABCC1-203ENST00000572053 SLIT1O75093 1534 aa18.13■□□□□ 0.49
ABCC1-203ENST00000572053 CFAP65Q6ZU64 1925 aaKnown RBP18.12■□□□□ 0.49
ABCC1-203ENST00000572053 ARHGAP23Q9P227 1491 aa18.12■□□□□ 0.49
ABCC1-203ENST00000572053 LMTK2Q8IWU2 1503 aa18.12■□□□□ 0.49
ABCC1-203ENST00000572053 PIP4K2BP78356 416 aa18.11■□□□□ 0.49
ABCC1-203ENST00000572053 ADGRL2O95490 1459 aa18.1■□□□□ 0.49
ABCC1-203ENST00000572053 CHIC2Q9UKJ5 165 aa18.1■□□□□ 0.49
ABCC1-203ENST00000572053 SOCS7O14512 581 aa18.09■□□□□ 0.49
ABCC1-203ENST00000572053 EID1Q9Y6B2 187 aa18.09■□□□□ 0.49
ABCC1-203ENST00000572053 PIK3C2BO00750 1634 aa18.09■□□□□ 0.49
ABCC1-203ENST00000572053 KDM5AP29375 1690 aaKnown RBP18.08■□□□□ 0.48
ABCC1-203ENST00000572053 LRRC7Q96NW7 1537 aa18.08■□□□□ 0.48
ABCC1-203ENST00000572053 TXNDC2Q86VQ3 553 aa18.07■□□□□ 0.48
ABCC1-203ENST00000572053 STAG3Q9UJ98 1225 aa18.07■□□□□ 0.48
ABCC1-203ENST00000572053 EFCAB6Q5THR3 1501 aa18.07■□□□□ 0.48
ABCC1-203ENST00000572053 HSPA1LP34931 641 aa18.06■□□□□ 0.48
ABCC1-203ENST00000572053 STRCP1A6NGW2 1772 aa18.06■□□□□ 0.48
ABCC1-203ENST00000572053 TMEM2Q9UHN6 1383 aa18.05■□□□□ 0.48
ABCC1-203ENST00000572053 LTKP29376 864 aa18.05■□□□□ 0.48
ABCC1-203ENST00000572053 FAM50AQ14320 339 aaKnown RBP18.05■□□□□ 0.48
ABCC1-203ENST00000572053 ALKQ9UM73 1620 aa18.03■□□□□ 0.48
ABCC1-203ENST00000572053 NOS1P29475 1434 aa18.03■□□□□ 0.48
ABCC1-203ENST00000572053 ANKRD50Q9ULJ7 1429 aa18.03■□□□□ 0.48
ABCC1-203ENST00000572053 RPRD2Q5VT52 1461 aaKnown RBP18.02■□□□□ 0.48
ABCC1-203ENST00000572053 ADGRB3O60242 1522 aa18.02■□□□□ 0.47
ABCC1-203ENST00000572053 MED1Q15648 1581 aaPredicted RBP18.01■□□□□ 0.47
ABCC1-203ENST00000572053 IDI1Q13907 227 aa18■□□□□ 0.47
ABCC1-203ENST00000572053 SLC52A1Q9NWF4 448 aa17.99■□□□□ 0.47
ABCC1-203ENST00000572053 TET3O43151 1660 aa17.97■□□□□ 0.47
ABCC1-203ENST00000572053 UNC13BO14795 1591 aa17.95■□□□□ 0.46
ABCC1-203ENST00000572053 GCC2Q8IWJ2 1684 aa17.93■□□□□ 0.46
ABCC1-203ENST00000572053 ROCK1Q13464 1354 aa17.92■□□□□ 0.46
ABCC1-203ENST00000572053 XIRP1Q702N8 1843 aaKnown RBP17.92■□□□□ 0.46
ABCC1-203ENST00000572053 NKTRP30414 1462 aaKnown RBP17.92■□□□□ 0.46
ABCC1-203ENST00000572053 KCNA6P17658 529 aa17.91■□□□□ 0.46
ABCC1-203ENST00000572053 PHF23Q9BUL5 403 aaPredicted RBP17.91■□□□□ 0.46
ABCC1-203ENST00000572053 NWD1Q149M9 1564 aa17.91■□□□□ 0.46
ABCC1-203ENST00000572053 TMEM94Q12767 1356 aa17.91■□□□□ 0.46
ABCC1-203ENST00000572053 SLC26A8Q96RN1 970 aa17.9■□□□□ 0.46
Retrieved 100 of 20,778 RNA–protein pairs in 40.7 ms