RNA–Protein interactions for RNA: ENST00000571178.1

PAM16-202, Transcript of presequence translocase associated motor 16, humanhuman

TSL 3

Gene PAM16, Length 353 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PAM16-202ENST00000571178 CAMSAP1Q5T5Y3 1602 aa22.79■■□□□ 1.24
PAM16-202ENST00000571178 PTPRTO14522 1441 aa22.79■■□□□ 1.24
PAM16-202ENST00000571178 MIA2Q96PC5 1412 aa22.79■■□□□ 1.24
PAM16-202ENST00000571178 ABCC5O15440 1437 aa22.77■■□□□ 1.24
PAM16-202ENST00000571178 PPARGC1BQ86YN6 1023 aaKnown RBP22.76■■□□□ 1.23
PAM16-202ENST00000571178 TNRQ92752 1358 aa22.75■■□□□ 1.23
PAM16-202ENST00000571178 ZNF335Q9H4Z2 1342 aaPredicted RBP22.74■■□□□ 1.23
PAM16-202ENST00000571178 GRWD1Q9BQ67 446 aaKnown RBP eCLIP22.73■■□□□ 1.23
PAM16-202ENST00000571178 PKD2Q13563 968 aa22.7■■□□□ 1.22
PAM16-202ENST00000571178 MYO3AQ8NEV4 1616 aa22.69■■□□□ 1.22
PAM16-202ENST00000571178 MAST1Q9Y2H9 1570 aa22.68■■□□□ 1.22
PAM16-202ENST00000571178 CEP170BQ9Y4F5 1589 aaPredicted RBP22.68■■□□□ 1.22
PAM16-202ENST00000571178 KDM5DQ9BY66 1539 aa22.68■■□□□ 1.22
PAM16-202ENST00000571178 PZPP20742 1482 aa22.68■■□□□ 1.22
PAM16-202ENST00000571178 FGD6Q6ZV73 1430 aa22.68■■□□□ 1.22
PAM16-202ENST00000571178 KIF15Q9NS87 1388 aa22.68■■□□□ 1.22
PAM16-202ENST00000571178 FAM50AQ14320 339 aaKnown RBP22.68■■□□□ 1.22
PAM16-202ENST00000571178 A2ML1A8K2U0 1454 aa22.67■■□□□ 1.22
PAM16-202ENST00000571178 LTBP4Q8N2S1 1624 aa22.67■■□□□ 1.22
PAM16-202ENST00000571178 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP22.66■■□□□ 1.221e-7■■■□□ 14.6
PAM16-202ENST00000571178 PTPN23Q9H3S7 1636 aa22.66■■□□□ 1.22
PAM16-202ENST00000571178 DAPK1P53355 1430 aa22.65■■□□□ 1.22
PAM16-202ENST00000571178 TCOF1Q13428 1488 aaKnown RBP22.65■■□□□ 1.22
PAM16-202ENST00000571178 DNMT1P26358 1616 aaKnown RBP22.64■■□□□ 1.21
PAM16-202ENST00000571178 ABCC3O15438 1527 aa22.63■■□□□ 1.21
PAM16-202ENST00000571178 THEMISQ8N1K5 641 aaPredicted RBP22.61■■□□□ 1.21
PAM16-202ENST00000571178 MROH1Q8NDA8 1641 aa22.6■■□□□ 1.21
PAM16-202ENST00000571178 PLA2R1Q13018 1463 aa22.6■■□□□ 1.21
PAM16-202ENST00000571178 ANKLE2Q86XL3 938 aa22.6■■□□□ 1.21
PAM16-202ENST00000571178 DUOX2Q9NRD8 1548 aa22.6■■□□□ 1.21
PAM16-202ENST00000571178 ZNF142P52746 1687 aaPredicted RBP22.58■■□□□ 1.21
PAM16-202ENST00000571178 RNF17Q9BXT8 1623 aaKnown RBP22.57■■□□□ 1.2
PAM16-202ENST00000571178 ANKRD30AQ9BXX3 1397 aa22.55■■□□□ 1.2
PAM16-202ENST00000571178 ERVK-7P63135 1459 aa22.54■■□□□ 1.2
PAM16-202ENST00000571178 UBAP1LF5GYI3 381 aa22.54■■□□□ 1.2
PAM16-202ENST00000571178 SHANK2Q9UPX8 1470 aa22.54■■□□□ 1.2
PAM16-202ENST00000571178 LTKP29376 864 aa22.52■■□□□ 1.2
PAM16-202ENST00000571178 ITGAEP38570 1179 aa22.52■■□□□ 1.2
PAM16-202ENST00000571178 FAM135AQ9P2D6 1515 aa22.52■■□□□ 1.19
PAM16-202ENST00000571178 UGGT1Q9NYU2 1555 aa22.51■■□□□ 1.19
PAM16-202ENST00000571178 NLRP1Q9C000 1473 aa22.51■■□□□ 1.19
PAM16-202ENST00000571178 CFAP65Q6ZU64 1925 aaKnown RBP22.51■■□□□ 1.19
PAM16-202ENST00000571178 ERBINQ96RT1 1412 aa22.5■■□□□ 1.19
PAM16-202ENST00000571178 CEP152O94986 1710 aa22.5■■□□□ 1.19
PAM16-202ENST00000571178 NEURL4Q96JN8 1562 aa22.5■■□□□ 1.19
PAM16-202ENST00000571178 EIF2AK4Q9P2K8 1649 aaKnown RBP22.49■■□□□ 1.19
PAM16-202ENST00000571178 SPATA31D1Q6ZQQ2 1576 aa22.49■■□□□ 1.19
PAM16-202ENST00000571178 IDI1Q13907 227 aa22.48■■□□□ 1.19
PAM16-202ENST00000571178 CROCC2H7BZ55 1655 aa22.48■■□□□ 1.19
PAM16-202ENST00000571178 NPHP4O75161 1426 aaPredicted RBP22.47■■□□□ 1.19
PAM16-202ENST00000571178 TXNDC2Q86VQ3 553 aa22.46■■□□□ 1.19
PAM16-202ENST00000571178 SENP3Q9H4L4 574 aaPredicted RBP22.46■■□□□ 1.19
PAM16-202ENST00000571178 KANK1Q14678 1352 aa22.45■■□□□ 1.18
PAM16-202ENST00000571178 ARHGAP31Q2M1Z3 1444 aa22.43■■□□□ 1.18
PAM16-202ENST00000571178 PIP4K2BP78356 416 aa22.42■■□□□ 1.18
PAM16-202ENST00000571178 PRDM15P57071 1507 aaPredicted RBP22.41■■□□□ 1.18
PAM16-202ENST00000571178 ADGRL2O95490 1459 aa22.41■■□□□ 1.18
PAM16-202ENST00000571178 ZC3H13Q5T200 1668 aaKnown RBP22.4■■□□□ 1.18
PAM16-202ENST00000571178 STAG3Q9UJ98 1225 aa22.4■■□□□ 1.18
PAM16-202ENST00000571178 MED14O60244 1454 aa22.4■■□□□ 1.18
PAM16-202ENST00000571178 ANKRD50Q9ULJ7 1429 aa22.4■■□□□ 1.18
PAM16-202ENST00000571178 SCAF1Q9H7N4 1312 aaKnown RBP22.39■■□□□ 1.18
PAM16-202ENST00000571178 IQSEC2Q5JU85 1478 aa22.38■■□□□ 1.17
PAM16-202ENST00000571178 VWDEQ8N2E2 1590 aa22.38■■□□□ 1.17
PAM16-202ENST00000571178 DEPDC5O75140 1603 aa22.36■■□□□ 1.17
PAM16-202ENST00000571178 ILDR2Q71H61 639 aa22.36■■□□□ 1.17
PAM16-202ENST00000571178 POLR1AO95602 1720 aaPredicted RBP22.35■■□□□ 1.17
PAM16-202ENST00000571178 EID1Q9Y6B2 187 aa22.34■■□□□ 1.17
PAM16-202ENST00000571178 DISP3Q9P2K9 1392 aa22.34■■□□□ 1.17
PAM16-202ENST00000571178 LMTK2Q8IWU2 1503 aa22.33■■□□□ 1.17
PAM16-202ENST00000571178 HSPA1LP34931 641 aa22.33■■□□□ 1.17
PAM16-202ENST00000571178 SLC26A8Q96RN1 970 aa22.33■■□□□ 1.17
PAM16-202ENST00000571178 UBR1Q8IWV7 1749 aa22.33■■□□□ 1.17
PAM16-202ENST00000571178 RBM33Q96EV2 1170 aaKnown RBP22.32■■□□□ 1.16
PAM16-202ENST00000571178 TMEM2Q9UHN6 1383 aa22.32■■□□□ 1.16
PAM16-202ENST00000571178 NOS1P29475 1434 aa22.31■■□□□ 1.16
PAM16-202ENST00000571178 SCAF11Q99590 1463 aaKnown RBP22.31■■□□□ 1.16
PAM16-202ENST00000571178 ARHGAP23Q9P227 1491 aa22.31■■□□□ 1.16
PAM16-202ENST00000571178 PIK3C2BO00750 1634 aa22.31■■□□□ 1.16
PAM16-202ENST00000571178 TOM1O60784 492 aa22.3■■□□□ 1.16
PAM16-202ENST00000571178 SYNMO15061 1565 aa22.29■■□□□ 1.16
PAM16-202ENST00000571178 NUTM2DQ5VT03 806 aaPredicted RBP22.29■■□□□ 1.16
PAM16-202ENST00000571178 IQGAP1P46940 1657 aa22.28■■□□□ 1.16
PAM16-202ENST00000571178 CHGAP10645 457 aaKnown RBP22.28■■□□□ 1.16
PAM16-202ENST00000571178 SLIT1O75093 1534 aa22.27■■□□□ 1.16
PAM16-202ENST00000571178 CPS1P31327 1500 aa22.27■■□□□ 1.16
PAM16-202ENST00000571178 SLC52A1Q9NWF4 448 aa22.27■■□□□ 1.16
PAM16-202ENST00000571178 STRCP1A6NGW2 1772 aa22.27■■□□□ 1.16
PAM16-202ENST00000571178 LRRC7Q96NW7 1537 aa22.26■■□□□ 1.15
PAM16-202ENST00000571178 BCANQ96GW7 911 aa22.26■■□□□ 1.15
PAM16-202ENST00000571178 EFCAB6Q5THR3 1501 aa22.26■■□□□ 1.15
PAM16-202ENST00000571178 ROCK1Q13464 1354 aa22.25■■□□□ 1.15
PAM16-202ENST00000571178 NUP155O75694 1391 aa22.25■■□□□ 1.15
PAM16-202ENST00000571178 ALKQ9UM73 1620 aa22.22■■□□□ 1.15
PAM16-202ENST00000571178 KCNA6P17658 529 aa22.18■■□□□ 1.14
PAM16-202ENST00000571178 PROSER2Q86WR7 435 aaPredicted RBP22.17■■□□□ 1.14
PAM16-202ENST00000571178 TET3O43151 1660 aa22.15■■□□□ 1.14
PAM16-202ENST00000571178 RIMS2Q9UQ26 1411 aa22.14■■□□□ 1.14
PAM16-202ENST00000571178 PPP1R15AO75807 674 aaPredicted RBP22.14■■□□□ 1.13
PAM16-202ENST00000571178 ADGRB3O60242 1522 aa22.14■■□□□ 1.13
Retrieved 100 of 20,778 RNA–protein pairs in 21.7 ms