RNA–Protein interactions for RNA: ENST00000571178.1

PAM16-202, Transcript of presequence translocase associated motor 16, humanhuman

TSL 3

Gene PAM16, Length 353 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PAM16-202ENST00000571178 NISCHQ9Y2I1 1504 aa36.06■■■■□ 3.36
PAM16-202ENST00000571178 ABCC9O60706 1549 aa32.23■■■□□ 2.75
PAM16-202ENST00000571178 CCDC180Q9P1Z9 1646 aa31.99■■■□□ 2.71
PAM16-202ENST00000571178 DCAF8L2P0C7V8 631 aa30.73■■■□□ 2.51
PAM16-202ENST00000571178 RB1CC1Q8TDY2 1594 aa30.5■■■□□ 2.47
PAM16-202ENST00000571178 NACADO15069 1562 aa30.33■■■□□ 2.45
PAM16-202ENST00000571178 DNAJC5BQ9UF47 199 aa30.32■■■□□ 2.44
PAM16-202ENST00000571178 PABPN1Q86U42 306 aaKnown RBP eCLIP30.24■■■□□ 2.43
PAM16-202ENST00000571178 MYO15BQ96JP2 1530 aa29.89■■■□□ 2.38
PAM16-202ENST00000571178 ZCCHC6Q5VYS8 1495 aaKnown RBP29.87■■■□□ 2.37
PAM16-202ENST00000571178 UNC13AQ9UPW8 1703 aa29.79■■■□□ 2.36
PAM16-202ENST00000571178 BICRAQ9NZM4 1560 aa29.74■■■□□ 2.35
PAM16-202ENST00000571178 DCAF1Q9Y4B6 1507 aa29.63■■■□□ 2.33
PAM16-202ENST00000571178 SCRIBQ14160 1630 aa29.45■■■□□ 2.3
PAM16-202ENST00000571178 SHROOM4Q9ULL8 1493 aa29.04■■■□□ 2.24
PAM16-202ENST00000571178 CC2D2AQ9P2K1 1620 aa28.98■■■□□ 2.23
PAM16-202ENST00000571178 EIF4G1Q04637 1599 aaKnown RBP28.93■■■□□ 2.22
PAM16-202ENST00000571178 CECR2Q9BXF3 1484 aa28.93■■■□□ 2.22
PAM16-202ENST00000571178 NCAPD3P42695 1498 aa28.12■■■□□ 2.09
PAM16-202ENST00000571178 ATAD2BQ9ULI0 1458 aa28.11■■■□□ 2.09
PAM16-202ENST00000571178 SMARCA4P51532 1647 aa28.02■■■□□ 2.08
PAM16-202ENST00000571178 MROH2BQ7Z745 1585 aa27.89■■■□□ 2.05
PAM16-202ENST00000571178 SMARCA2P51531 1590 aa27.87■■■□□ 2.05
PAM16-202ENST00000571178 BAZ1AQ9NRL2 1556 aaPredicted RBP27.87■■■□□ 2.05
PAM16-202ENST00000571178 BAZ1BQ9UIG0 1483 aaKnown RBP27.78■■■□□ 2.04
PAM16-202ENST00000571178 NESP48681 1621 aa27.78■■■□□ 2.04
PAM16-202ENST00000571178 HMGXB3Q12766 1538 aa27.77■■■□□ 2.04
PAM16-202ENST00000571178 ERCC6Q03468 1493 aa27.7■■■□□ 2.02
PAM16-202ENST00000571178 PEG3Q9GZU2 1588 aa27.66■■■□□ 2.02
PAM16-202ENST00000571178 DNAJC5Q9H3Z4 198 aa27.51■■□□□ 1.99
PAM16-202ENST00000571178 WIZO95785 1651 aa27.51■■□□□ 1.99
PAM16-202ENST00000571178 CUX2O14529 1486 aa27.46■■□□□ 1.99
PAM16-202ENST00000571178 RSF1Q96T23 1441 aaPredicted RBP27.4■■□□□ 1.98
PAM16-202ENST00000571178 CADPSQ9ULU8 1353 aa27.34■■□□□ 1.97
PAM16-202ENST00000571178 LAMC3Q9Y6N6 1575 aa27.32■■□□□ 1.96
PAM16-202ENST00000571178 PDS5BQ9NTI5 1447 aa27.27■■□□□ 1.96
PAM16-202ENST00000571178 THOC2Q8NI27 1593 aaKnown RBP27.2■■□□□ 1.94
PAM16-202ENST00000571178 KIF21AQ7Z4S6 1674 aa27.2■■□□□ 1.94
PAM16-202ENST00000571178 TOP2AP11388 1531 aaKnown RBP27.06■■□□□ 1.92
PAM16-202ENST00000571178 MRC2Q9UBG0 1479 aa27.01■■□□□ 1.91
PAM16-202ENST00000571178 CFTRP13569 1480 aa27■■□□□ 1.91
PAM16-202ENST00000571178 FANCD2Q9BXW9 1451 aa27■■□□□ 1.91
PAM16-202ENST00000571178 CCDC88BA6NC98 1476 aa26.93■■□□□ 1.9
PAM16-202ENST00000571178 CEP164Q9UPV0 1460 aa26.93■■□□□ 1.9
PAM16-202ENST00000571178 WDR62O43379 1518 aa26.88■■□□□ 1.89
PAM16-202ENST00000571178 URB2Q14146 1524 aaKnown RBP26.8■■□□□ 1.88
PAM16-202ENST00000571178 SUPT5HO00267 1087 aaKnown RBP26.57■■□□□ 1.84
PAM16-202ENST00000571178 ZNF608Q9ULD9 1512 aaPredicted RBP26.5■■□□□ 1.83
PAM16-202ENST00000571178 TRIM41Q8WV44 630 aa26.5■■□□□ 1.83
PAM16-202ENST00000571178 TOPBP1Q92547 1522 aa26.49■■□□□ 1.83
PAM16-202ENST00000571178 OSCARQ8IYS5 282 aa26.48■■□□□ 1.83
PAM16-202ENST00000571178 PRDM2Q13029 1718 aa26.44■■□□□ 1.82
PAM16-202ENST00000571178 IFT140Q96RY7 1462 aa26.39■■□□□ 1.82
PAM16-202ENST00000571178 AQRO60306 1485 aaKnown RBP eCLIP26.33■■□□□ 1.812e-8■■■■■ 38.1
PAM16-202ENST00000571178 DNMBPQ6XZF7 1577 aa26.32■■□□□ 1.8
PAM16-202ENST00000571178 ABCC8Q09428 1581 aa26.31■■□□□ 1.8
PAM16-202ENST00000571178 RAD54L2Q9Y4B4 1467 aa26.29■■□□□ 1.8
PAM16-202ENST00000571178 POLA1P09884 1462 aaPredicted RBP26.24■■□□□ 1.79
PAM16-202ENST00000571178 TDRD9Q8NDG6 1382 aaKnown RBP26.22■■□□□ 1.79
PAM16-202ENST00000571178 SOGA1O94964 1423 aa26.21■■□□□ 1.79
PAM16-202ENST00000571178 TARBP1Q13395 1621 aaKnown RBP26.19■■□□□ 1.78
PAM16-202ENST00000571178 FBLN2P98095 1184 aa26.19■■□□□ 1.78
PAM16-202ENST00000571178 EIF4G3O43432 1585 aaKnown RBP26.16■■□□□ 1.78
PAM16-202ENST00000571178 CUX1P39880 1505 aa26.15■■□□□ 1.78
PAM16-202ENST00000571178 FGD5Q6ZNL6 1462 aa26.12■■□□□ 1.77
PAM16-202ENST00000571178 RIMBP3CA6NJZ7 1639 aa25.97■■□□□ 1.75
PAM16-202ENST00000571178 RIMBP3BA6NNM3 1639 aa25.97■■□□□ 1.75
PAM16-202ENST00000571178 RIMBP3Q9UFD9 1639 aa25.97■■□□□ 1.75
PAM16-202ENST00000571178 CYB5RLQ6IPT4 315 aa25.96■■□□□ 1.75
PAM16-202ENST00000571178 SNAPC4Q5SXM2 1469 aa25.94■■□□□ 1.74
PAM16-202ENST00000571178 CHMP7Q8WUX9 453 aaPredicted RBP25.94■■□□□ 1.74
PAM16-202ENST00000571178 ARHGEF11O15085 1522 aa25.93■■□□□ 1.74
PAM16-202ENST00000571178 CHD1O14646 1710 aa25.91■■□□□ 1.74
PAM16-202ENST00000571178 GRIN2BQ13224 1484 aa25.85■■□□□ 1.73
PAM16-202ENST00000571178 GAPVD1Q14C86 1478 aa25.82■■□□□ 1.72
PAM16-202ENST00000571178 WRNQ14191 1432 aaPredicted RBP eCLIP25.77■■□□□ 1.72
PAM16-202ENST00000571178 ABCA10Q8WWZ4 1543 aa25.77■■□□□ 1.72
PAM16-202ENST00000571178 MAGI1Q96QZ7 1491 aaPredicted RBP25.75■■□□□ 1.71
PAM16-202ENST00000571178 SYNJ1O43426 1573 aa25.73■■□□□ 1.71
PAM16-202ENST00000571178 ARAP1Q96P48 1450 aa25.73■■□□□ 1.71
PAM16-202ENST00000571178 WDR97A6NE52 1622 aa25.73■■□□□ 1.71
PAM16-202ENST00000571178 SYNJ2O15056 1496 aa25.72■■□□□ 1.71
PAM16-202ENST00000571178 CLASP1Q7Z460 1538 aa25.66■■□□□ 1.7
PAM16-202ENST00000571178 TOP2BQ02880 1626 aa25.66■■□□□ 1.7
PAM16-202ENST00000571178 ABCA5Q8WWZ7 1642 aa25.65■■□□□ 1.7
PAM16-202ENST00000571178 PBRM1Q86U86 1689 aa25.62■■□□□ 1.69
PAM16-202ENST00000571178 BIVM-ERCC5R4GMW8 1640 aa25.6■■□□□ 1.69
PAM16-202ENST00000571178 TRHP20396 242 aaPredicted RBP25.58■■□□□ 1.69
PAM16-202ENST00000571178 GRIN2AQ12879 1464 aa25.52■■□□□ 1.68
PAM16-202ENST00000571178 FHAD1B1AJZ9 1412 aa25.48■■□□□ 1.67
PAM16-202ENST00000571178 ERCC6L2Q5T890 1561 aa25.46■■□□□ 1.67
PAM16-202ENST00000571178 ADAMTS12P58397 1594 aa25.45■■□□□ 1.66
PAM16-202ENST00000571178 CEP170Q5SW79 1584 aa25.43■■□□□ 1.66
PAM16-202ENST00000571178 NUP160Q12769 1436 aa25.42■■□□□ 1.66
PAM16-202ENST00000571178 ERICH3Q5RHP9 1530 aa25.39■■□□□ 1.66
PAM16-202ENST00000571178 IGF1RP08069 1367 aa25.37■■□□□ 1.65
PAM16-202ENST00000571178 JPH4Q96JJ6 628 aa25.35■■□□□ 1.65
PAM16-202ENST00000571178 PRG4Q92954 1404 aaPredicted RBP25.27■■□□□ 1.64
PAM16-202ENST00000571178 KIF27Q86VH2 1401 aa25.24■■□□□ 1.63
PAM16-202ENST00000571178 SHROOM2Q13796 1616 aa25.19■■□□□ 1.62
Retrieved 100 of 20,778 RNA–protein pairs in 7.3 ms