RNA–Protein interactions for RNA: ENST00000570324.1

NPLOC4-204, Transcript of NPL4 homolog, ubiquitin recognition factor, humanhuman

TSL 3

Gene NPLOC4, Length 414 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPLOC4-204ENST00000570324 MAST1Q9Y2H9 1570 aa13.9□□□□□ -0.18
NPLOC4-204ENST00000570324 NCOA1Q15788 1441 aa13.9□□□□□ -0.19
NPLOC4-204ENST00000570324 CEP170BQ9Y4F5 1589 aaPredicted RBP13.89□□□□□ -0.19
NPLOC4-204ENST00000570324 FAM135AQ9P2D6 1515 aa13.89□□□□□ -0.19
NPLOC4-204ENST00000570324 NCKAP5LQ9HCH0 1330 aa13.89□□□□□ -0.19
NPLOC4-204ENST00000570324 PKD2Q13563 968 aa13.88□□□□□ -0.19
NPLOC4-204ENST00000570324 FBXO31Q5XUX0 539 aaPredicted RBP13.88□□□□□ -0.19
NPLOC4-204ENST00000570324 TNRQ92752 1358 aa13.87□□□□□ -0.19
NPLOC4-204ENST00000570324 ZNF142P52746 1687 aaPredicted RBP13.87□□□□□ -0.19
NPLOC4-204ENST00000570324 PTPN23Q9H3S7 1636 aa13.86□□□□□ -0.19
NPLOC4-204ENST00000570324 A2ML1A8K2U0 1454 aa13.86□□□□□ -0.19
NPLOC4-204ENST00000570324 PZPP20742 1482 aa13.86□□□□□ -0.19
NPLOC4-204ENST00000570324 RRP7BPQ9NSQ0 103 aa13.85□□□□□ -0.19
NPLOC4-204ENST00000570324 DUOX2Q9NRD8 1548 aa13.85□□□□□ -0.19
NPLOC4-204ENST00000570324 EIF2AK4Q9P2K8 1649 aaKnown RBP13.84□□□□□ -0.19
NPLOC4-204ENST00000570324 PLA2R1Q13018 1463 aa13.84□□□□□ -0.19
NPLOC4-204ENST00000570324 KIF15Q9NS87 1388 aa13.83□□□□□ -0.19
NPLOC4-204ENST00000570324 FGD6Q6ZV73 1430 aa13.83□□□□□ -0.2
NPLOC4-204ENST00000570324 THEMISQ8N1K5 641 aaPredicted RBP13.83□□□□□ -0.2
NPLOC4-204ENST00000570324 RNF17Q9BXT8 1623 aaKnown RBP13.82□□□□□ -0.2
NPLOC4-204ENST00000570324 ABCC5O15440 1437 aa13.82□□□□□ -0.2
NPLOC4-204ENST00000570324 SHANK2Q9UPX8 1470 aa13.82□□□□□ -0.2
NPLOC4-204ENST00000570324 FAM50AQ14320 339 aaKnown RBP13.82□□□□□ -0.2
NPLOC4-204ENST00000570324 CHIC2Q9UKJ5 165 aa13.82□□□□□ -0.2
NPLOC4-204ENST00000570324 DNMT1P26358 1616 aaKnown RBP13.82□□□□□ -0.2
NPLOC4-204ENST00000570324 ZC3H13Q5T200 1668 aaKnown RBP13.82□□□□□ -0.2
NPLOC4-204ENST00000570324 DAPK1P53355 1430 aa13.81□□□□□ -0.2
NPLOC4-204ENST00000570324 GRWD1Q9BQ67 446 aaKnown RBP eCLIP13.81□□□□□ -0.21e-7■■□□□ 11.7
NPLOC4-204ENST00000570324 CROCC2H7BZ55 1655 aa13.81□□□□□ -0.2
NPLOC4-204ENST00000570324 ABCC3O15438 1527 aa13.8□□□□□ -0.2
NPLOC4-204ENST00000570324 ANKLE2Q86XL3 938 aa13.8□□□□□ -0.2
NPLOC4-204ENST00000570324 KANK1Q14678 1352 aa13.8□□□□□ -0.2
NPLOC4-204ENST00000570324 ANKRD30AQ9BXX3 1397 aa13.8□□□□□ -0.2
NPLOC4-204ENST00000570324 TCOF1Q13428 1488 aaKnown RBP13.8□□□□□ -0.2
NPLOC4-204ENST00000570324 NLRP1Q9C000 1473 aa13.8□□□□□ -0.2
NPLOC4-204ENST00000570324 ERBINQ96RT1 1412 aa13.79□□□□□ -0.2
NPLOC4-204ENST00000570324 ZNF335Q9H4Z2 1342 aaPredicted RBP13.78□□□□□ -0.2
NPLOC4-204ENST00000570324 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP13.78□□□□□ -0.2
NPLOC4-204ENST00000570324 UGGT1Q9NYU2 1555 aa13.78□□□□□ -0.2
NPLOC4-204ENST00000570324 LTBP4Q8N2S1 1624 aa13.78□□□□□ -0.2
NPLOC4-204ENST00000570324 CEP152O94986 1710 aa13.78□□□□□ -0.2
NPLOC4-204ENST00000570324 CFAP65Q6ZU64 1925 aaKnown RBP13.76□□□□□ -0.21
NPLOC4-204ENST00000570324 POLR1AO95602 1720 aaPredicted RBP13.76□□□□□ -0.21
NPLOC4-204ENST00000570324 MROH1Q8NDA8 1641 aa13.75□□□□□ -0.21
NPLOC4-204ENST00000570324 IQSEC2Q5JU85 1478 aa13.75□□□□□ -0.21
NPLOC4-204ENST00000570324 SPATA31D1Q6ZQQ2 1576 aa13.75□□□□□ -0.21
NPLOC4-204ENST00000570324 ERVK-7P63135 1459 aa13.74□□□□□ -0.21
NPLOC4-204ENST00000570324 STAG3Q9UJ98 1225 aa13.73□□□□□ -0.21
NPLOC4-204ENST00000570324 PRDM15P57071 1507 aaPredicted RBP13.73□□□□□ -0.21
NPLOC4-204ENST00000570324 UBAP1LF5GYI3 381 aa13.72□□□□□ -0.21
NPLOC4-204ENST00000570324 NPHP4O75161 1426 aaPredicted RBP13.71□□□□□ -0.22
NPLOC4-204ENST00000570324 ARHGAP31Q2M1Z3 1444 aa13.71□□□□□ -0.22
NPLOC4-204ENST00000570324 DEPDC5O75140 1603 aa13.7□□□□□ -0.22
NPLOC4-204ENST00000570324 NEURL4Q96JN8 1562 aa13.7□□□□□ -0.22
NPLOC4-204ENST00000570324 PPARGC1BQ86YN6 1023 aaKnown RBP13.69□□□□□ -0.22
NPLOC4-204ENST00000570324 EID1Q9Y6B2 187 aa13.69□□□□□ -0.22
NPLOC4-204ENST00000570324 ADGRL2O95490 1459 aa13.68□□□□□ -0.22
NPLOC4-204ENST00000570324 ITGAEP38570 1179 aa13.68□□□□□ -0.22
NPLOC4-204ENST00000570324 SCAF1Q9H7N4 1312 aaKnown RBP13.67□□□□□ -0.22
NPLOC4-204ENST00000570324 ANKRD50Q9ULJ7 1429 aa13.67□□□□□ -0.22
NPLOC4-204ENST00000570324 TXNDC2Q86VQ3 553 aa13.67□□□□□ -0.22
NPLOC4-204ENST00000570324 CPS1P31327 1500 aa13.67□□□□□ -0.22
NPLOC4-204ENST00000570324 UBR1Q8IWV7 1749 aa13.67□□□□□ -0.22
NPLOC4-204ENST00000570324 MED14O60244 1454 aa13.67□□□□□ -0.22
NPLOC4-204ENST00000570324 IQGAP1P46940 1657 aa13.66□□□□□ -0.22
NPLOC4-204ENST00000570324 LMTK2Q8IWU2 1503 aa13.65□□□□□ -0.22
NPLOC4-204ENST00000570324 TOM1O60784 492 aa13.65□□□□□ -0.22
NPLOC4-204ENST00000570324 PIK3C2BO00750 1634 aa13.64□□□□□ -0.23
NPLOC4-204ENST00000570324 SCAF11Q99590 1463 aaKnown RBP13.63□□□□□ -0.23
NPLOC4-204ENST00000570324 PIP4K2BP78356 416 aa13.63□□□□□ -0.23
NPLOC4-204ENST00000570324 IDI1Q13907 227 aa13.63□□□□□ -0.23
NPLOC4-204ENST00000570324 VWDEQ8N2E2 1590 aa13.62□□□□□ -0.23
NPLOC4-204ENST00000570324 DISP3Q9P2K9 1392 aa13.62□□□□□ -0.23
NPLOC4-204ENST00000570324 LTKP29376 864 aa13.62□□□□□ -0.23
NPLOC4-204ENST00000570324 BCANQ96GW7 911 aa13.62□□□□□ -0.23
NPLOC4-204ENST00000570324 SLC52A1Q9NWF4 448 aa13.62□□□□□ -0.23
NPLOC4-204ENST00000570324 EFCAB6Q5THR3 1501 aa13.62□□□□□ -0.23
NPLOC4-204ENST00000570324 ROCK1Q13464 1354 aa13.6□□□□□ -0.23
NPLOC4-204ENST00000570324 TMEM2Q9UHN6 1383 aa13.6□□□□□ -0.23
NPLOC4-204ENST00000570324 SLIT1O75093 1534 aa13.6□□□□□ -0.23
NPLOC4-204ENST00000570324 ARHGAP23Q9P227 1491 aa13.6□□□□□ -0.23
NPLOC4-204ENST00000570324 RPRD2Q5VT52 1461 aaKnown RBP13.59□□□□□ -0.23
NPLOC4-204ENST00000570324 NOS1P29475 1434 aa13.58□□□□□ -0.24
NPLOC4-204ENST00000570324 CHGAP10645 457 aaKnown RBP13.58□□□□□ -0.24
NPLOC4-204ENST00000570324 HDGFP51858 240 aaKnown RBP13.58□□□□□ -0.24
NPLOC4-204ENST00000570324 TET3O43151 1660 aa13.58□□□□□ -0.24
NPLOC4-204ENST00000570324 SYNMO15061 1565 aa13.58□□□□□ -0.24
NPLOC4-204ENST00000570324 KDM5AP29375 1690 aaKnown RBP13.57□□□□□ -0.24
NPLOC4-204ENST00000570324 PPP1R15AO75807 674 aaPredicted RBP13.56□□□□□ -0.24
NPLOC4-204ENST00000570324 UNC13BO14795 1591 aa13.56□□□□□ -0.24
NPLOC4-204ENST00000570324 GCC2Q8IWJ2 1684 aa13.56□□□□□ -0.24
NPLOC4-204ENST00000570324 NUP155O75694 1391 aa13.56□□□□□ -0.24
NPLOC4-204ENST00000570324 ADGRB3O60242 1522 aa13.55□□□□□ -0.24
NPLOC4-204ENST00000570324 LRRC7Q96NW7 1537 aa13.54□□□□□ -0.24
NPLOC4-204ENST00000570324 SLC26A8Q96RN1 970 aa13.54□□□□□ -0.24
NPLOC4-204ENST00000570324 SENP3Q9H4L4 574 aaPredicted RBP13.54□□□□□ -0.24
NPLOC4-204ENST00000570324 STRCP1A6NGW2 1772 aa13.53□□□□□ -0.24
NPLOC4-204ENST00000570324 HSPA1LP34931 641 aa13.53□□□□□ -0.24
NPLOC4-204ENST00000570324 IQGAP3Q86VI3 1631 aa13.52□□□□□ -0.25
NPLOC4-204ENST00000570324 PROSER2Q86WR7 435 aaPredicted RBP13.51□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 62.9 ms