RNA–Protein interactions for RNA: ENST00000569983.5

PKD1-237, Transcript of polycystin 1, transient receptor potential channel interacting, humanhuman

TSL 5

Gene PKD1, Length 722 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKD1-237ENST00000569983 DAPK1P53355 1430 aa31.32■■■□□ 2.61
PKD1-237ENST00000569983 DNMT1P26358 1616 aaKnown RBP31.32■■■□□ 2.6
PKD1-237ENST00000569983 ILDR1Q86SU0 546 aaPredicted RBP31.31■■■□□ 2.6
PKD1-237ENST00000569983 EIF2AK4Q9P2K8 1649 aaKnown RBP31.31■■■□□ 2.6
PKD1-237ENST00000569983 DUOX2Q9NRD8 1548 aa31.3■■■□□ 2.6
PKD1-237ENST00000569983 RNF17Q9BXT8 1623 aaKnown RBP31.29■■■□□ 2.6
PKD1-237ENST00000569983 STRCQ7RTU9 1775 aa31.29■■■□□ 2.6
PKD1-237ENST00000569983 KIF15Q9NS87 1388 aa31.29■■■□□ 2.6
PKD1-237ENST00000569983 MYO3AQ8NEV4 1616 aa31.27■■■□□ 2.6
PKD1-237ENST00000569983 DMRT2Q9Y5R5 561 aa31.27■■■□□ 2.6
PKD1-237ENST00000569983 RRP7BPQ9NSQ0 103 aa31.25■■■□□ 2.59
PKD1-237ENST00000569983 PZPP20742 1482 aa31.24■■■□□ 2.59
PKD1-237ENST00000569983 ZNF142P52746 1687 aaPredicted RBP31.22■■■□□ 2.59
PKD1-237ENST00000569983 FAM50AQ14320 339 aaKnown RBP31.22■■■□□ 2.59
PKD1-237ENST00000569983 CEP170BQ9Y4F5 1589 aaPredicted RBP31.22■■■□□ 2.59
PKD1-237ENST00000569983 NCOA1Q15788 1441 aa31.21■■■□□ 2.59
PKD1-237ENST00000569983 ERBINQ96RT1 1412 aa31.21■■■□□ 2.59
PKD1-237ENST00000569983 CAMSAP1Q5T5Y3 1602 aa31.2■■■□□ 2.59
PKD1-237ENST00000569983 FBXO31Q5XUX0 539 aaPredicted RBP31.2■■■□□ 2.59
PKD1-237ENST00000569983 CHIC2Q9UKJ5 165 aa31.2■■■□□ 2.59
PKD1-237ENST00000569983 ABCC3O15438 1527 aa31.19■■■□□ 2.58
PKD1-237ENST00000569983 ANKRD30AQ9BXX3 1397 aa31.19■■■□□ 2.58
PKD1-237ENST00000569983 ZC3H13Q5T200 1668 aaKnown RBP31.19■■■□□ 2.58
PKD1-237ENST00000569983 TNRQ92752 1358 aa31.18■■■□□ 2.58
PKD1-237ENST00000569983 MROH1Q8NDA8 1641 aa31.18■■■□□ 2.58
PKD1-237ENST00000569983 PTPRTO14522 1441 aa31.15■■■□□ 2.58
PKD1-237ENST00000569983 A2ML1A8K2U0 1454 aa31.14■■■□□ 2.58
PKD1-237ENST00000569983 PLA2R1Q13018 1463 aa31.11■■■□□ 2.57
PKD1-237ENST00000569983 FBXO41Q8TF61 875 aa31.11■■■□□ 2.57
PKD1-237ENST00000569983 PRDM15P57071 1507 aaPredicted RBP31.1■■■□□ 2.57
PKD1-237ENST00000569983 ADGRL2O95490 1459 aa31.1■■■□□ 2.57
PKD1-237ENST00000569983 CEP152O94986 1710 aa31.1■■■□□ 2.57
PKD1-237ENST00000569983 PPARGC1BQ86YN6 1023 aaKnown RBP31.08■■■□□ 2.57
PKD1-237ENST00000569983 NCKAP5LQ9HCH0 1330 aa31.07■■■□□ 2.56
PKD1-237ENST00000569983 CERKQ8TCT0 537 aa31.06■■■□□ 2.56
PKD1-237ENST00000569983 GRWD1Q9BQ67 446 aaKnown RBP eCLIP31.06■■■□□ 2.56
PKD1-237ENST00000569983 DEPDC5O75140 1603 aa31.06■■■□□ 2.56
PKD1-237ENST00000569983 PKD2Q13563 968 aa31.05■■■□□ 2.56
PKD1-237ENST00000569983 NLRP1Q9C000 1473 aa31.05■■■□□ 2.56
PKD1-237ENST00000569983 KANK1Q14678 1352 aa31.04■■■□□ 2.56
PKD1-237ENST00000569983 SPATA31D1Q6ZQQ2 1576 aa31.03■■■□□ 2.56
PKD1-237ENST00000569983 ERVK-7P63135 1459 aa31.02■■■□□ 2.56
PKD1-237ENST00000569983 ARHGAP31Q2M1Z3 1444 aa30.98■■■□□ 2.55
PKD1-237ENST00000569983 ANKRD50Q9ULJ7 1429 aa30.97■■■□□ 2.55
PKD1-237ENST00000569983 UGGT1Q9NYU2 1555 aa30.96■■■□□ 2.55
PKD1-237ENST00000569983 THEMISQ8N1K5 641 aaPredicted RBP30.96■■■□□ 2.55
PKD1-237ENST00000569983 CFAP65Q6ZU64 1925 aaKnown RBP30.96■■■□□ 2.55
PKD1-237ENST00000569983 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP30.92■■■□□ 2.54
PKD1-237ENST00000569983 VWDEQ8N2E2 1590 aa30.92■■■□□ 2.54
PKD1-237ENST00000569983 LMTK2Q8IWU2 1503 aa30.92■■■□□ 2.54
PKD1-237ENST00000569983 POLR1AO95602 1720 aaPredicted RBP30.9■■■□□ 2.54
PKD1-237ENST00000569983 ROCK1Q13464 1354 aa30.9■■■□□ 2.54
PKD1-237ENST00000569983 LTBP4Q8N2S1 1624 aa30.89■■■□□ 2.54
PKD1-237ENST00000569983 ANKLE2Q86XL3 938 aa30.89■■■□□ 2.54
PKD1-237ENST00000569983 ITGAEP38570 1179 aa30.88■■■□□ 2.53
PKD1-237ENST00000569983 NEURL4Q96JN8 1562 aa30.85■■■□□ 2.53
PKD1-237ENST00000569983 ZNF335Q9H4Z2 1342 aaPredicted RBP30.84■■■□□ 2.53
PKD1-237ENST00000569983 EFCAB6Q5THR3 1501 aa30.83■■■□□ 2.53
PKD1-237ENST00000569983 UBR1Q8IWV7 1749 aa30.81■■■□□ 2.52
PKD1-237ENST00000569983 RRBP1Q9P2E9 1410 aaKnown RBP30.79■■■□□ 2.52
PKD1-237ENST00000569983 UNC13BO14795 1591 aa30.77■■■□□ 2.52
PKD1-237ENST00000569983 MED14O60244 1454 aa30.76■■■□□ 2.52
PKD1-237ENST00000569983 NPHP4O75161 1426 aaPredicted RBP30.76■■■□□ 2.51
PKD1-237ENST00000569983 IQSEC2Q5JU85 1478 aa30.75■■■□□ 2.51
PKD1-237ENST00000569983 NOS1P29475 1434 aa30.73■■■□□ 2.51
PKD1-237ENST00000569983 PIK3C2BO00750 1634 aa30.73■■■□□ 2.51
PKD1-237ENST00000569983 RPRD2Q5VT52 1461 aaKnown RBP30.73■■■□□ 2.51
PKD1-237ENST00000569983 TET3O43151 1660 aa30.73■■■□□ 2.51
PKD1-237ENST00000569983 SYNMO15061 1565 aa30.72■■■□□ 2.51
PKD1-237ENST00000569983 STAG3Q9UJ98 1225 aa30.72■■■□□ 2.51
PKD1-237ENST00000569983 IQGAP1P46940 1657 aa30.71■■■□□ 2.51
PKD1-237ENST00000569983 IDI1Q13907 227 aa30.7■■■□□ 2.51
PKD1-237ENST00000569983 SCAF11Q99590 1463 aaKnown RBP30.69■■■□□ 2.5
PKD1-237ENST00000569983 ARHGAP23Q9P227 1491 aa30.69■■■□□ 2.5
PKD1-237ENST00000569983 SLIT1O75093 1534 aa30.68■■■□□ 2.5
PKD1-237ENST00000569983 GCC2Q8IWJ2 1684 aa30.68■■■□□ 2.5
PKD1-237ENST00000569983 TXNDC2Q86VQ3 553 aa30.66■■■□□ 2.5
PKD1-237ENST00000569983 SLC52A1Q9NWF4 448 aa30.66■■■□□ 2.5
PKD1-237ENST00000569983 KDM5AP29375 1690 aaKnown RBP30.65■■■□□ 2.5
PKD1-237ENST00000569983 IQGAP3Q86VI3 1631 aa30.65■■■□□ 2.5
PKD1-237ENST00000569983 NUP155O75694 1391 aa30.65■■■□□ 2.5
PKD1-237ENST00000569983 LTKP29376 864 aa30.64■■■□□ 2.5
PKD1-237ENST00000569983 EID1Q9Y6B2 187 aa30.64■■■□□ 2.5
PKD1-237ENST00000569983 TMEM2Q9UHN6 1383 aa30.64■■■□□ 2.5
PKD1-237ENST00000569983 CPS1P31327 1500 aa30.63■■■□□ 2.49
PKD1-237ENST00000569983 ADGRB3O60242 1522 aa30.61■■■□□ 2.49
PKD1-237ENST00000569983 E9PCH4 1651 aa30.59■■■□□ 2.49
PKD1-237ENST00000569983 UBAP1LF5GYI3 381 aa30.54■■■□□ 2.48
PKD1-237ENST00000569983 NAIPQ13075 1403 aa30.54■■■□□ 2.48
PKD1-237ENST00000569983 HFM1A2PYH4 1435 aa30.47■■■□□ 2.47
PKD1-237ENST00000569983 STRCP1A6NGW2 1772 aa30.46■■■□□ 2.47
PKD1-237ENST00000569983 CHGAP10645 457 aaKnown RBP30.46■■■□□ 2.47
PKD1-237ENST00000569983 TMEM131LA2VDJ0 1609 aa30.46■■■□□ 2.47
PKD1-237ENST00000569983 MYO5BQ9ULV0 1848 aa30.45■■■□□ 2.46
PKD1-237ENST00000569983 ZFYVE9O95405 1425 aa30.41■■■□□ 2.46
PKD1-237ENST00000569983 RIMS2Q9UQ26 1411 aa30.41■■■□□ 2.46
PKD1-237ENST00000569983 HDGFP51858 240 aaKnown RBP30.41■■■□□ 2.46
PKD1-237ENST00000569983 LRRC7Q96NW7 1537 aa30.41■■■□□ 2.46
PKD1-237ENST00000569983 BCANQ96GW7 911 aa30.4■■■□□ 2.46
PKD1-237ENST00000569983 TOM1O60784 492 aa30.39■■■□□ 2.46
Retrieved 100 of 20,778 RNA–protein pairs in 31.6 ms