RNA–Protein interactions for RNA: ENST00000569062.1

ABCA3-206, Transcript of ATP binding cassette subfamily A member 3, humanhuman

TSL 5

Gene ABCA3, Length 900 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABCA3-206ENST00000569062 KDM5DQ9BY66 1539 aa31.3■■■□□ 2.6
ABCA3-206ENST00000569062 EIF2AK4Q9P2K8 1649 aaKnown RBP31.3■■■□□ 2.6
ABCA3-206ENST00000569062 RNF17Q9BXT8 1623 aaKnown RBP31.29■■■□□ 2.6
ABCA3-206ENST00000569062 FAM135AQ9P2D6 1515 aa31.28■■■□□ 2.6
ABCA3-206ENST00000569062 DUOX2Q9NRD8 1548 aa31.27■■■□□ 2.6
ABCA3-206ENST00000569062 MYO3AQ8NEV4 1616 aa31.26■■■□□ 2.59
ABCA3-206ENST00000569062 WASHC2CQ9Y4E1 1318 aa31.25■■■□□ 2.59
ABCA3-206ENST00000569062 KIF15Q9NS87 1388 aa31.23■■■□□ 2.59
ABCA3-206ENST00000569062 RRP7BPQ9NSQ0 103 aa31.22■■■□□ 2.59
ABCA3-206ENST00000569062 MROH1Q8NDA8 1641 aa31.22■■■□□ 2.59
ABCA3-206ENST00000569062 ZNF142P52746 1687 aaPredicted RBP31.21■■■□□ 2.59
ABCA3-206ENST00000569062 CHIC2Q9UKJ5 165 aa31.2■■■□□ 2.59
ABCA3-206ENST00000569062 FAM50AQ14320 339 aaKnown RBP31.19■■■□□ 2.58
ABCA3-206ENST00000569062 ILDR1Q86SU0 546 aaPredicted RBP31.19■■■□□ 2.58
ABCA3-206ENST00000569062 PZPP20742 1482 aa31.19■■■□□ 2.58
ABCA3-206ENST00000569062 FBXO31Q5XUX0 539 aaPredicted RBP31.18■■■□□ 2.58
ABCA3-206ENST00000569062 ZC3H13Q5T200 1668 aaKnown RBP31.18■■■□□ 2.58
ABCA3-206ENST00000569062 CEP170BQ9Y4F5 1589 aaPredicted RBP31.17■■■□□ 2.58
ABCA3-206ENST00000569062 CAMSAP1Q5T5Y3 1602 aa31.16■■■□□ 2.58
ABCA3-206ENST00000569062 ABCC3O15438 1527 aa31.16■■■□□ 2.58
ABCA3-206ENST00000569062 PPARGC1BQ86YN6 1023 aaKnown RBP31.16■■■□□ 2.58
ABCA3-206ENST00000569062 ERBINQ96RT1 1412 aa31.15■■■□□ 2.58
ABCA3-206ENST00000569062 CEP152O94986 1710 aa31.15■■■□□ 2.58
ABCA3-206ENST00000569062 ANKRD30AQ9BXX3 1397 aa31.13■■■□□ 2.57
ABCA3-206ENST00000569062 NCOA1Q15788 1441 aa31.13■■■□□ 2.57
ABCA3-206ENST00000569062 DMRT2Q9Y5R5 561 aa31.11■■■□□ 2.57
ABCA3-206ENST00000569062 TNRQ92752 1358 aa31.1■■■□□ 2.57
ABCA3-206ENST00000569062 PRDM15P57071 1507 aaPredicted RBP31.09■■■□□ 2.57
ABCA3-206ENST00000569062 ADGRL2O95490 1459 aa31.09■■■□□ 2.57
ABCA3-206ENST00000569062 DEPDC5O75140 1603 aa31.08■■■□□ 2.57
ABCA3-206ENST00000569062 A2ML1A8K2U0 1454 aa31.08■■■□□ 2.57
ABCA3-206ENST00000569062 PTPRTO14522 1441 aa31.05■■■□□ 2.56
ABCA3-206ENST00000569062 CFAP65Q6ZU64 1925 aaKnown RBP31.04■■■□□ 2.56
ABCA3-206ENST00000569062 PLA2R1Q13018 1463 aa31.02■■■□□ 2.56
ABCA3-206ENST00000569062 GRWD1Q9BQ67 446 aaKnown RBP eCLIP31.02■■■□□ 2.56
ABCA3-206ENST00000569062 NCKAP5LQ9HCH0 1330 aa31.01■■■□□ 2.56
ABCA3-206ENST00000569062 SPATA31D1Q6ZQQ2 1576 aa31.01■■■□□ 2.56
ABCA3-206ENST00000569062 ERVK-7P63135 1459 aa30.98■■■□□ 2.55
ABCA3-206ENST00000569062 NLRP1Q9C000 1473 aa30.96■■■□□ 2.55
ABCA3-206ENST00000569062 FBXO41Q8TF61 875 aa30.96■■■□□ 2.55
ABCA3-206ENST00000569062 KANK1Q14678 1352 aa30.94■■■□□ 2.54
ABCA3-206ENST00000569062 VWDEQ8N2E2 1590 aa30.94■■■□□ 2.54
ABCA3-206ENST00000569062 CERKQ8TCT0 537 aa30.94■■■□□ 2.54
ABCA3-206ENST00000569062 PKD2Q13563 968 aa30.93■■■□□ 2.54
ABCA3-206ENST00000569062 UGGT1Q9NYU2 1555 aa30.92■■■□□ 2.54
ABCA3-206ENST00000569062 ARHGAP31Q2M1Z3 1444 aa30.92■■■□□ 2.54
ABCA3-206ENST00000569062 ANKRD50Q9ULJ7 1429 aa30.92■■■□□ 2.54
ABCA3-206ENST00000569062 POLR1AO95602 1720 aaPredicted RBP30.91■■■□□ 2.54
ABCA3-206ENST00000569062 LMTK2Q8IWU2 1503 aa30.89■■■□□ 2.54
ABCA3-206ENST00000569062 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP30.89■■■□□ 2.54
ABCA3-206ENST00000569062 ITGAEP38570 1179 aa30.88■■■□□ 2.53
ABCA3-206ENST00000569062 ROCK1Q13464 1354 aa30.86■■■□□ 2.53
ABCA3-206ENST00000569062 LTBP4Q8N2S1 1624 aa30.85■■■□□ 2.53
ABCA3-206ENST00000569062 THEMISQ8N1K5 641 aaPredicted RBP30.85■■■□□ 2.53
ABCA3-206ENST00000569062 NEURL4Q96JN8 1562 aa30.84■■■□□ 2.53
ABCA3-206ENST00000569062 UBR1Q8IWV7 1749 aa30.82■■■□□ 2.52
ABCA3-206ENST00000569062 EFCAB6Q5THR3 1501 aa30.81■■■□□ 2.52
ABCA3-206ENST00000569062 RRBP1Q9P2E9 1410 aaKnown RBP30.81■■■□□ 2.52
ABCA3-206ENST00000569062 UNC13BO14795 1591 aa30.79■■■□□ 2.52
ABCA3-206ENST00000569062 ANKLE2Q86XL3 938 aa30.78■■■□□ 2.52
ABCA3-206ENST00000569062 ZNF335Q9H4Z2 1342 aaPredicted RBP30.77■■■□□ 2.52
ABCA3-206ENST00000569062 PIK3C2BO00750 1634 aa30.76■■■□□ 2.51
ABCA3-206ENST00000569062 SYNMO15061 1565 aa30.75■■■□□ 2.51
ABCA3-206ENST00000569062 TET3O43151 1660 aa30.74■■■□□ 2.51
ABCA3-206ENST00000569062 NOS1P29475 1434 aa30.71■■■□□ 2.51
ABCA3-206ENST00000569062 GCC2Q8IWJ2 1684 aa30.71■■■□□ 2.51
ABCA3-206ENST00000569062 MED14O60244 1454 aa30.7■■■□□ 2.51
ABCA3-206ENST00000569062 NPHP4O75161 1426 aaPredicted RBP30.69■■■□□ 2.5
ABCA3-206ENST00000569062 IQGAP1P46940 1657 aa30.68■■■□□ 2.5
ABCA3-206ENST00000569062 IQGAP3Q86VI3 1631 aa30.67■■■□□ 2.5
ABCA3-206ENST00000569062 IDI1Q13907 227 aa30.67■■■□□ 2.5
ABCA3-206ENST00000569062 RPRD2Q5VT52 1461 aaKnown RBP30.67■■■□□ 2.5
ABCA3-206ENST00000569062 SLIT1O75093 1534 aa30.65■■■□□ 2.5
ABCA3-206ENST00000569062 E9PCH4 1651 aa30.65■■■□□ 2.5
ABCA3-206ENST00000569062 KDM5AP29375 1690 aaKnown RBP30.65■■■□□ 2.5
ABCA3-206ENST00000569062 ARHGAP23Q9P227 1491 aa30.64■■■□□ 2.5
ABCA3-206ENST00000569062 IQSEC2Q5JU85 1478 aa30.63■■■□□ 2.49
ABCA3-206ENST00000569062 STAG3Q9UJ98 1225 aa30.62■■■□□ 2.49
ABCA3-206ENST00000569062 SCAF11Q99590 1463 aaKnown RBP30.62■■■□□ 2.49
ABCA3-206ENST00000569062 LTKP29376 864 aa30.61■■■□□ 2.49
ABCA3-206ENST00000569062 NUP155O75694 1391 aa30.61■■■□□ 2.49
ABCA3-206ENST00000569062 TXNDC2Q86VQ3 553 aa30.58■■■□□ 2.49
ABCA3-206ENST00000569062 ADGRB3O60242 1522 aa30.57■■■□□ 2.49
ABCA3-206ENST00000569062 TMEM2Q9UHN6 1383 aa30.57■■■□□ 2.48
ABCA3-206ENST00000569062 SLC52A1Q9NWF4 448 aa30.57■■■□□ 2.48
ABCA3-206ENST00000569062 NAIPQ13075 1403 aa30.56■■■□□ 2.48
ABCA3-206ENST00000569062 MYO5BQ9ULV0 1848 aa30.55■■■□□ 2.48
ABCA3-206ENST00000569062 EID1Q9Y6B2 187 aa30.53■■■□□ 2.48
ABCA3-206ENST00000569062 CPS1P31327 1500 aa30.52■■■□□ 2.48
ABCA3-206ENST00000569062 STRCP1A6NGW2 1772 aa30.52■■■□□ 2.48
ABCA3-206ENST00000569062 TMEM131LA2VDJ0 1609 aa30.47■■■□□ 2.47
ABCA3-206ENST00000569062 HFM1A2PYH4 1435 aa30.46■■■□□ 2.47
ABCA3-206ENST00000569062 SPHKAPQ2M3C7 1700 aa30.42■■■□□ 2.46
ABCA3-206ENST00000569062 UBAP1LF5GYI3 381 aa30.41■■■□□ 2.46
ABCA3-206ENST00000569062 CHGAP10645 457 aaKnown RBP30.4■■■□□ 2.46
ABCA3-206ENST00000569062 ZFYVE9O95405 1425 aa30.39■■■□□ 2.46
ABCA3-206ENST00000569062 RIMS2Q9UQ26 1411 aa30.37■■■□□ 2.45
ABCA3-206ENST00000569062 LRRC7Q96NW7 1537 aa30.36■■■□□ 2.45
ABCA3-206ENST00000569062 SLC26A8Q96RN1 970 aa30.34■■■□□ 2.45
ABCA3-206ENST00000569062 TRIM52Q96A61 297 aa30.33■■■□□ 2.45
Retrieved 100 of 20,778 RNA–protein pairs in 57.9 ms