RNA–Protein interactions for RNA: ENST00000567943.1

FANCA-228, Transcript of FA complementation group A, humanhuman

TSL 3

Gene FANCA, Length 860 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FANCA-228ENST00000567943 RNF17Q9BXT8 1623 aaKnown RBP39.12■■■■□ 3.85
FANCA-228ENST00000567943 EIF2AK4Q9P2K8 1649 aaKnown RBP39.11■■■■□ 3.85
FANCA-228ENST00000567943 KDM5DQ9BY66 1539 aa39.1■■■■□ 3.85
FANCA-228ENST00000567943 FAM135AQ9P2D6 1515 aa39.09■■■■□ 3.85
FANCA-228ENST00000567943 DUOX2Q9NRD8 1548 aa39.07■■■■□ 3.84
FANCA-228ENST00000567943 MROH1Q8NDA8 1641 aa39.05■■■■□ 3.84
FANCA-228ENST00000567943 MYO3AQ8NEV4 1616 aa39.05■■■■□ 3.84
FANCA-228ENST00000567943 KIF15Q9NS87 1388 aa39.04■■■■□ 3.84
FANCA-228ENST00000567943 WASHC2CQ9Y4E1 1318 aa39.02■■■■□ 3.84
FANCA-228ENST00000567943 ZNF142P52746 1687 aaPredicted RBP39■■■■□ 3.83
FANCA-228ENST00000567943 RRP7BPQ9NSQ0 103 aa39■■■■□ 3.83
FANCA-228ENST00000567943 PZPP20742 1482 aa38.98■■■■□ 3.83
FANCA-228ENST00000567943 FBXO31Q5XUX0 539 aaPredicted RBP38.97■■■■□ 3.83
FANCA-228ENST00000567943 ABCC3O15438 1527 aa38.97■■■■□ 3.83
FANCA-228ENST00000567943 ILDR1Q86SU0 546 aaPredicted RBP38.96■■■■□ 3.83
FANCA-228ENST00000567943 CHIC2Q9UKJ5 165 aa38.95■■■■□ 3.83
FANCA-228ENST00000567943 CEP170BQ9Y4F5 1589 aaPredicted RBP38.95■■■■□ 3.83
FANCA-228ENST00000567943 ZC3H13Q5T200 1668 aaKnown RBP38.94■■■■□ 3.82
FANCA-228ENST00000567943 FAM50AQ14320 339 aaKnown RBP38.93■■■■□ 3.82
FANCA-228ENST00000567943 ERBINQ96RT1 1412 aa38.93■■■■□ 3.82
FANCA-228ENST00000567943 NCOA1Q15788 1441 aa38.92■■■■□ 3.82
FANCA-228ENST00000567943 CAMSAP1Q5T5Y3 1602 aa38.92■■■■□ 3.82
FANCA-228ENST00000567943 CEP152O94986 1710 aa38.91■■■■□ 3.82
FANCA-228ENST00000567943 PPARGC1BQ86YN6 1023 aaKnown RBP38.9■■■■□ 3.82
FANCA-228ENST00000567943 ANKRD30AQ9BXX3 1397 aa38.89■■■■□ 3.82
FANCA-228ENST00000567943 ADGRL2O95490 1459 aa38.88■■■■□ 3.81
FANCA-228ENST00000567943 PRDM15P57071 1507 aaPredicted RBP38.87■■■■□ 3.81
FANCA-228ENST00000567943 DEPDC5O75140 1603 aa38.86■■■■□ 3.81
FANCA-228ENST00000567943 TNRQ92752 1358 aa38.85■■■■□ 3.81
FANCA-228ENST00000567943 A2ML1A8K2U0 1454 aa38.84■■■■□ 3.81
FANCA-228ENST00000567943 DMRT2Q9Y5R5 561 aa38.83■■■■□ 3.81
FANCA-228ENST00000567943 PTPRTO14522 1441 aa38.8■■■■□ 3.8
FANCA-228ENST00000567943 CFAP65Q6ZU64 1925 aaKnown RBP38.77■■■■□ 3.8
FANCA-228ENST00000567943 PLA2R1Q13018 1463 aa38.77■■■■□ 3.8
FANCA-228ENST00000567943 SPATA31D1Q6ZQQ2 1576 aa38.77■■■■□ 3.8
FANCA-228ENST00000567943 NCKAP5LQ9HCH0 1330 aa38.74■■■■□ 3.79
FANCA-228ENST00000567943 ERVK-7P63135 1459 aa38.73■■■■□ 3.79
FANCA-228ENST00000567943 GRWD1Q9BQ67 446 aaKnown RBP eCLIP38.72■■■■□ 3.794e-12■□□□□ 9
FANCA-228ENST00000567943 VWDEQ8N2E2 1590 aa38.71■■■■□ 3.79
FANCA-228ENST00000567943 NLRP1Q9C000 1473 aa38.7■■■■□ 3.79
FANCA-228ENST00000567943 ARHGAP31Q2M1Z3 1444 aa38.67■■■■□ 3.78
FANCA-228ENST00000567943 FBXO41Q8TF61 875 aa38.66■■■■□ 3.78
FANCA-228ENST00000567943 ANKRD50Q9ULJ7 1429 aa38.65■■■■□ 3.78
FANCA-228ENST00000567943 CERKQ8TCT0 537 aa38.65■■■■□ 3.78
FANCA-228ENST00000567943 PKD2Q13563 968 aa38.64■■■■□ 3.78
FANCA-228ENST00000567943 LMTK2Q8IWU2 1503 aa38.63■■■■□ 3.78
FANCA-228ENST00000567943 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP38.63■■■■□ 3.77
FANCA-228ENST00000567943 UGGT1Q9NYU2 1555 aa38.61■■■■□ 3.77
FANCA-228ENST00000567943 KANK1Q14678 1352 aa38.61■■■■□ 3.77
FANCA-228ENST00000567943 ROCK1Q13464 1354 aa38.59■■■■□ 3.77
FANCA-228ENST00000567943 LTBP4Q8N2S1 1624 aa38.59■■■■□ 3.77
FANCA-228ENST00000567943 POLR1AO95602 1720 aaPredicted RBP38.58■■■■□ 3.77
FANCA-228ENST00000567943 NEURL4Q96JN8 1562 aa38.57■■■■□ 3.76
FANCA-228ENST00000567943 THEMISQ8N1K5 641 aaPredicted RBP38.54■■■■□ 3.76
FANCA-228ENST00000567943 ITGAEP38570 1179 aa38.53■■■■□ 3.76
FANCA-228ENST00000567943 RRBP1Q9P2E9 1410 aaKnown RBP38.53■■■■□ 3.76
FANCA-228ENST00000567943 UBR1Q8IWV7 1749 aa38.52■■■■□ 3.76
FANCA-228ENST00000567943 EFCAB6Q5THR3 1501 aa38.52■■■■□ 3.76
FANCA-228ENST00000567943 UNC13BO14795 1591 aa38.49■■■■□ 3.75
FANCA-228ENST00000567943 ZNF335Q9H4Z2 1342 aaPredicted RBP38.44■■■■□ 3.74
FANCA-228ENST00000567943 SYNMO15061 1565 aa38.44■■■■□ 3.74
FANCA-228ENST00000567943 ANKLE2Q86XL3 938 aa38.43■■■■□ 3.74
FANCA-228ENST00000567943 PIK3C2BO00750 1634 aa38.42■■■■□ 3.74
FANCA-228ENST00000567943 NOS1P29475 1434 aa38.41■■■■□ 3.74
FANCA-228ENST00000567943 TET3O43151 1660 aa38.41■■■■□ 3.74
FANCA-228ENST00000567943 MED14O60244 1454 aa38.4■■■■□ 3.74
FANCA-228ENST00000567943 GCC2Q8IWJ2 1684 aa38.36■■■■□ 3.73
FANCA-228ENST00000567943 RPRD2Q5VT52 1461 aaKnown RBP38.35■■■■□ 3.73
FANCA-228ENST00000567943 IDI1Q13907 227 aa38.34■■■■□ 3.73
FANCA-228ENST00000567943 NPHP4O75161 1426 aaPredicted RBP38.34■■■■□ 3.73
FANCA-228ENST00000567943 ARHGAP23Q9P227 1491 aa38.34■■■■□ 3.73
FANCA-228ENST00000567943 IQGAP3Q86VI3 1631 aa38.34■■■■□ 3.73
FANCA-228ENST00000567943 SLIT1O75093 1534 aa38.33■■■■□ 3.73
FANCA-228ENST00000567943 IQGAP1P46940 1657 aa38.32■■■■□ 3.72
FANCA-228ENST00000567943 KDM5AP29375 1690 aaKnown RBP38.31■■■■□ 3.72
FANCA-228ENST00000567943 E9PCH4 1651 aa38.3■■■■□ 3.72
FANCA-228ENST00000567943 IQSEC2Q5JU85 1478 aa38.28■■■■□ 3.72
FANCA-228ENST00000567943 LTKP29376 864 aa38.27■■■■□ 3.72
FANCA-228ENST00000567943 SCAF11Q99590 1463 aaKnown RBP38.25■■■■□ 3.71
FANCA-228ENST00000567943 NUP155O75694 1391 aa38.24■■■■□ 3.71
FANCA-228ENST00000567943 TMEM2Q9UHN6 1383 aa38.22■■■■□ 3.71
FANCA-228ENST00000567943 NAIPQ13075 1403 aa38.21■■■■□ 3.71
FANCA-228ENST00000567943 SLC52A1Q9NWF4 448 aa38.2■■■■□ 3.71
FANCA-228ENST00000567943 ADGRB3O60242 1522 aa38.2■■■■□ 3.71
FANCA-228ENST00000567943 TXNDC2Q86VQ3 553 aa38.19■■■■□ 3.7
FANCA-228ENST00000567943 MYO5BQ9ULV0 1848 aa38.17■■■■□ 3.7
FANCA-228ENST00000567943 STAG3Q9UJ98 1225 aa38.17■■■■□ 3.7
FANCA-228ENST00000567943 STRCP1A6NGW2 1772 aa38.16■■■■□ 3.7
FANCA-228ENST00000567943 CPS1P31327 1500 aa38.13■■■■□ 3.69
FANCA-228ENST00000567943 TMEM131LA2VDJ0 1609 aa38.11■■■■□ 3.69
FANCA-228ENST00000567943 EID1Q9Y6B2 187 aa38.1■■■■□ 3.69
FANCA-228ENST00000567943 HFM1A2PYH4 1435 aa38.08■■■■□ 3.69
FANCA-228ENST00000567943 ZFYVE9O95405 1425 aa38.02■■■■□ 3.68
FANCA-228ENST00000567943 SPHKAPQ2M3C7 1700 aa38■■■■□ 3.67
FANCA-228ENST00000567943 UBAP1LF5GYI3 381 aa37.96■■■■□ 3.67
FANCA-228ENST00000567943 LRRC7Q96NW7 1537 aa37.95■■■■□ 3.67
FANCA-228ENST00000567943 RIMS2Q9UQ26 1411 aa37.94■■■■□ 3.66
FANCA-228ENST00000567943 CHGAP10645 457 aaKnown RBP37.89■■■■□ 3.66
FANCA-228ENST00000567943 SLC26A8Q96RN1 970 aa37.89■■■■□ 3.66
FANCA-228ENST00000567943 ALKQ9UM73 1620 aa37.87■■■■□ 3.65
Retrieved 100 of 20,778 RNA–protein pairs in 47.7 ms