RNA–Protein interactions for RNA: ENST00000566239.1

HACD3-208, Transcript of 3-hydroxyacyl-CoA dehydratase 3, humanhuman

TSL 2

Gene HACD3, Length 393 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HACD3-208ENST00000566239 MYOM3Q5VTT5 1437 aa21.04■□□□□ 0.96
HACD3-208ENST00000566239 KANK4Q5T7N3 995 aaPredicted RBP21.03■□□□□ 0.96
HACD3-208ENST00000566239 MIA2Q96PC5 1412 aa21.03■□□□□ 0.96
HACD3-208ENST00000566239 APLP2Q06481 763 aa21.01■□□□□ 0.95
HACD3-208ENST00000566239 EIF2AK4Q9P2K8 1649 aaKnown RBP21■□□□□ 0.95
HACD3-208ENST00000566239 PLA2R1Q13018 1463 aa20.99■□□□□ 0.95
HACD3-208ENST00000566239 CROCC2H7BZ55 1655 aa20.99■□□□□ 0.95
HACD3-208ENST00000566239 ZC3H13Q5T200 1668 aaKnown RBP20.99■□□□□ 0.95
HACD3-208ENST00000566239 RNF17Q9BXT8 1623 aaKnown RBP20.98■□□□□ 0.95
HACD3-208ENST00000566239 WASHC2CQ9Y4E1 1318 aa20.97■□□□□ 0.95
HACD3-208ENST00000566239 PZPP20742 1482 aa20.96■□□□□ 0.95
HACD3-208ENST00000566239 POLR1AO95602 1720 aaPredicted RBP20.96■□□□□ 0.95
HACD3-208ENST00000566239 DNMT1P26358 1616 aaKnown RBP20.96■□□□□ 0.95
HACD3-208ENST00000566239 A2ML1A8K2U0 1454 aa20.95■□□□□ 0.94
HACD3-208ENST00000566239 PTPN23Q9H3S7 1636 aa20.95■□□□□ 0.94
HACD3-208ENST00000566239 LTBP4Q8N2S1 1624 aa20.93■□□□□ 0.94
HACD3-208ENST00000566239 PKD2Q13563 968 aa20.92■□□□□ 0.94
HACD3-208ENST00000566239 NCKAP5LQ9HCH0 1330 aa20.92■□□□□ 0.94
HACD3-208ENST00000566239 TNRQ92752 1358 aa20.92■□□□□ 0.94
HACD3-208ENST00000566239 TCOF1Q13428 1488 aaKnown RBP20.92■□□□□ 0.94
HACD3-208ENST00000566239 CEP152O94986 1710 aa20.91■□□□□ 0.94
HACD3-208ENST00000566239 DUOX2Q9NRD8 1548 aa20.9■□□□□ 0.94
HACD3-208ENST00000566239 IQSEC2Q5JU85 1478 aa20.9■□□□□ 0.94
HACD3-208ENST00000566239 SHANK2Q9UPX8 1470 aa20.89■□□□□ 0.94
HACD3-208ENST00000566239 CFAP65Q6ZU64 1925 aaKnown RBP20.89■□□□□ 0.93
HACD3-208ENST00000566239 FBXO31Q5XUX0 539 aaPredicted RBP20.89■□□□□ 0.93
HACD3-208ENST00000566239 ABCC3O15438 1527 aa20.88■□□□□ 0.93
HACD3-208ENST00000566239 MROH1Q8NDA8 1641 aa20.87■□□□□ 0.93
HACD3-208ENST00000566239 NLRP1Q9C000 1473 aa20.87■□□□□ 0.93
HACD3-208ENST00000566239 FGD6Q6ZV73 1430 aa20.84■□□□□ 0.93
HACD3-208ENST00000566239 UGGT1Q9NYU2 1555 aa20.84■□□□□ 0.93
HACD3-208ENST00000566239 ABCC5O15440 1437 aa20.83■□□□□ 0.93
HACD3-208ENST00000566239 SPATA31D1Q6ZQQ2 1576 aa20.83■□□□□ 0.92
HACD3-208ENST00000566239 DAPK1P53355 1430 aa20.82■□□□□ 0.92
HACD3-208ENST00000566239 ERBINQ96RT1 1412 aa20.82■□□□□ 0.92
HACD3-208ENST00000566239 KIF15Q9NS87 1388 aa20.82■□□□□ 0.92
HACD3-208ENST00000566239 NEURL4Q96JN8 1562 aa20.81■□□□□ 0.92
HACD3-208ENST00000566239 PRDM15P57071 1507 aaPredicted RBP20.81■□□□□ 0.92
HACD3-208ENST00000566239 ZNF335Q9H4Z2 1342 aaPredicted RBP20.8■□□□□ 0.92
HACD3-208ENST00000566239 DEPDC5O75140 1603 aa20.8■□□□□ 0.92
HACD3-208ENST00000566239 THEMISQ8N1K5 641 aaPredicted RBP20.8■□□□□ 0.92
HACD3-208ENST00000566239 ERVK-7P63135 1459 aa20.78■□□□□ 0.92
HACD3-208ENST00000566239 RRP7BPQ9NSQ0 103 aa20.77■□□□□ 0.92
HACD3-208ENST00000566239 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP20.76■□□□□ 0.91
HACD3-208ENST00000566239 ANKLE2Q86XL3 938 aa20.76■□□□□ 0.91
HACD3-208ENST00000566239 UBR1Q8IWV7 1749 aa20.75■□□□□ 0.91
HACD3-208ENST00000566239 IQGAP1P46940 1657 aa20.75■□□□□ 0.91
HACD3-208ENST00000566239 ANKRD30AQ9BXX3 1397 aa20.74■□□□□ 0.91
HACD3-208ENST00000566239 KANK1Q14678 1352 aa20.72■□□□□ 0.91
HACD3-208ENST00000566239 CPS1P31327 1500 aa20.72■□□□□ 0.91
HACD3-208ENST00000566239 ARHGAP31Q2M1Z3 1444 aa20.71■□□□□ 0.91
HACD3-208ENST00000566239 MED14O60244 1454 aa20.71■□□□□ 0.91
HACD3-208ENST00000566239 CHIC2Q9UKJ5 165 aa20.7■□□□□ 0.9
HACD3-208ENST00000566239 NPHP4O75161 1426 aaPredicted RBP20.7■□□□□ 0.9
HACD3-208ENST00000566239 GRWD1Q9BQ67 446 aaKnown RBP eCLIP20.69■□□□□ 0.9
HACD3-208ENST00000566239 ADGRL2O95490 1459 aa20.68■□□□□ 0.9
HACD3-208ENST00000566239 UBAP1LF5GYI3 381 aa20.67■□□□□ 0.9
HACD3-208ENST00000566239 FAM50AQ14320 339 aaKnown RBP20.67■□□□□ 0.9
HACD3-208ENST00000566239 VWDEQ8N2E2 1590 aa20.67■□□□□ 0.9
HACD3-208ENST00000566239 PIK3C2BO00750 1634 aa20.66■□□□□ 0.9
HACD3-208ENST00000566239 KDM5AP29375 1690 aaKnown RBP20.66■□□□□ 0.9
HACD3-208ENST00000566239 LMTK2Q8IWU2 1503 aa20.65■□□□□ 0.9
HACD3-208ENST00000566239 SLIT1O75093 1534 aa20.62■□□□□ 0.89
HACD3-208ENST00000566239 EFCAB6Q5THR3 1501 aa20.62■□□□□ 0.89
HACD3-208ENST00000566239 STRCP1A6NGW2 1772 aa20.61■□□□□ 0.89
HACD3-208ENST00000566239 SCAF11Q99590 1463 aaKnown RBP20.61■□□□□ 0.89
HACD3-208ENST00000566239 SYNMO15061 1565 aa20.6■□□□□ 0.89
HACD3-208ENST00000566239 ARHGAP23Q9P227 1491 aa20.59■□□□□ 0.89
HACD3-208ENST00000566239 ANKRD50Q9ULJ7 1429 aa20.58■□□□□ 0.88
HACD3-208ENST00000566239 DISP3Q9P2K9 1392 aa20.58■□□□□ 0.88
HACD3-208ENST00000566239 GCC2Q8IWJ2 1684 aa20.58■□□□□ 0.88
HACD3-208ENST00000566239 TOM1O60784 492 aa20.57■□□□□ 0.88
HACD3-208ENST00000566239 STAG3Q9UJ98 1225 aa20.57■□□□□ 0.88
HACD3-208ENST00000566239 TET3O43151 1660 aa20.57■□□□□ 0.88
HACD3-208ENST00000566239 EID1Q9Y6B2 187 aa20.56■□□□□ 0.88
HACD3-208ENST00000566239 TXNDC2Q86VQ3 553 aa20.55■□□□□ 0.88
HACD3-208ENST00000566239 UNC13BO14795 1591 aa20.55■□□□□ 0.88
HACD3-208ENST00000566239 RPRD2Q5VT52 1461 aaKnown RBP20.54■□□□□ 0.88
HACD3-208ENST00000566239 SCAF1Q9H7N4 1312 aaKnown RBP20.53■□□□□ 0.88
HACD3-208ENST00000566239 TMEM2Q9UHN6 1383 aa20.52■□□□□ 0.88
HACD3-208ENST00000566239 LTKP29376 864 aa20.52■□□□□ 0.88
HACD3-208ENST00000566239 MYO5BQ9ULV0 1848 aa20.52■□□□□ 0.88
HACD3-208ENST00000566239 ADGRB3O60242 1522 aa20.52■□□□□ 0.87
HACD3-208ENST00000566239 NOS1P29475 1434 aa20.52■□□□□ 0.87
HACD3-208ENST00000566239 LRRC7Q96NW7 1537 aa20.5■□□□□ 0.87
HACD3-208ENST00000566239 PIP4K2BP78356 416 aa20.5■□□□□ 0.87
HACD3-208ENST00000566239 IDI1Q13907 227 aa20.5■□□□□ 0.87
HACD3-208ENST00000566239 ROCK1Q13464 1354 aa20.49■□□□□ 0.87
HACD3-208ENST00000566239 XIRP1Q702N8 1843 aaKnown RBP20.49■□□□□ 0.87
HACD3-208ENST00000566239 SLC52A1Q9NWF4 448 aa20.48■□□□□ 0.87
HACD3-208ENST00000566239 E9PCH4 1651 aa20.48■□□□□ 0.87
HACD3-208ENST00000566239 IQGAP3Q86VI3 1631 aa20.47■□□□□ 0.87
HACD3-208ENST00000566239 ALKQ9UM73 1620 aa20.45■□□□□ 0.86
HACD3-208ENST00000566239 TMEM131LA2VDJ0 1609 aa20.42■□□□□ 0.86
HACD3-208ENST00000566239 HSPA1LP34931 641 aa20.41■□□□□ 0.86
HACD3-208ENST00000566239 ITGAEP38570 1179 aa20.41■□□□□ 0.86
HACD3-208ENST00000566239 PPARGC1BQ86YN6 1023 aaKnown RBP20.4■□□□□ 0.86
HACD3-208ENST00000566239 HDGFP51858 240 aaKnown RBP20.38■□□□□ 0.85
HACD3-208ENST00000566239 ILDR2Q71H61 639 aa20.38■□□□□ 0.85
HACD3-208ENST00000566239 CHD2O14647 1828 aaKnown RBP20.37■□□□□ 0.85
Retrieved 100 of 20,778 RNA–protein pairs in 20.3 ms