RNA–Protein interactions for RNA: ENST00000565205.5

TRAPPC2L-209, Transcript of trafficking protein particle complex 2 like, humanhuman

TSL 1 (best)

Gene TRAPPC2L, Length 1,084 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC2L-209ENST00000565205 NCKAP5LQ9HCH0 1330 aa20.1■□□□□ 0.81
TRAPPC2L-209ENST00000565205 MED1Q15648 1581 aaPredicted RBP20.1■□□□□ 0.81
TRAPPC2L-209ENST00000565205 CROCC2H7BZ55 1655 aa20.08■□□□□ 0.81
TRAPPC2L-209ENST00000565205 TCOF1Q13428 1488 aaKnown RBP20.08■□□□□ 0.81
TRAPPC2L-209ENST00000565205 DHX29Q7Z478 1369 aaKnown RBP20.08■□□□□ 0.8
TRAPPC2L-209ENST00000565205 MROH2AA6NES4 1674 aa20.06■□□□□ 0.8
TRAPPC2L-209ENST00000565205 DNMT1P26358 1616 aaKnown RBP20.05■□□□□ 0.8
TRAPPC2L-209ENST00000565205 SHANK2Q9UPX8 1470 aa20.05■□□□□ 0.8
TRAPPC2L-209ENST00000565205 HSPA1LP34931 641 aa20.03■□□□□ 0.8
TRAPPC2L-209ENST00000565205 DAPK1P53355 1430 aa20.02■□□□□ 0.8
TRAPPC2L-209ENST00000565205 GGT6Q6P531 493 aa20.02■□□□□ 0.8
TRAPPC2L-209ENST00000565205 CLTCQ00610 1675 aaKnown RBP20.02■□□□□ 0.8
TRAPPC2L-209ENST00000565205 ABCC5O15440 1437 aa20.02■□□□□ 0.79
TRAPPC2L-209ENST00000565205 PPP6R1Q9UPN7 881 aa20.01■□□□□ 0.79
TRAPPC2L-209ENST00000565205 KIF3BO15066 747 aa20■□□□□ 0.79
TRAPPC2L-209ENST00000565205 FAM135AQ9P2D6 1515 aa20■□□□□ 0.79
TRAPPC2L-209ENST00000565205 EIF2AK4Q9P2K8 1649 aaKnown RBP19.99■□□□□ 0.79
TRAPPC2L-209ENST00000565205 DUOX2Q9NRD8 1548 aa19.98■□□□□ 0.79
TRAPPC2L-209ENST00000565205 FAM50AQ14320 339 aaKnown RBP19.98■□□□□ 0.79
TRAPPC2L-209ENST00000565205 MYO3AQ8NEV4 1616 aa19.96■□□□□ 0.79
TRAPPC2L-209ENST00000565205 KIF15Q9NS87 1388 aa19.95■□□□□ 0.79
TRAPPC2L-209ENST00000565205 RNF17Q9BXT8 1623 aaKnown RBP19.95■□□□□ 0.78
TRAPPC2L-209ENST00000565205 ZNF142P52746 1687 aaPredicted RBP19.95■□□□□ 0.78
TRAPPC2L-209ENST00000565205 PIP4K2BP78356 416 aa19.95■□□□□ 0.78
TRAPPC2L-209ENST00000565205 KDM5DQ9BY66 1539 aa19.95■□□□□ 0.78
TRAPPC2L-209ENST00000565205 SCAF1Q9H7N4 1312 aaKnown RBP19.95■□□□□ 0.78
TRAPPC2L-209ENST00000565205 ZMYM3Q14202 1370 aa19.95■□□□□ 0.78
TRAPPC2L-209ENST00000565205 ANKRD30AQ9BXX3 1397 aa19.95■□□□□ 0.78
TRAPPC2L-209ENST00000565205 NPATQ14207 1427 aa19.94■□□□□ 0.78
TRAPPC2L-209ENST00000565205 ERBINQ96RT1 1412 aa19.93■□□□□ 0.78
TRAPPC2L-209ENST00000565205 PPARGC1BQ86YN6 1023 aaKnown RBP19.91■□□□□ 0.78
TRAPPC2L-209ENST00000565205 CEP170BQ9Y4F5 1589 aaPredicted RBP19.91■□□□□ 0.78
TRAPPC2L-209ENST00000565205 ZC3H13Q5T200 1668 aaKnown RBP19.91■□□□□ 0.78
TRAPPC2L-209ENST00000565205 RRP7BPQ9NSQ0 103 aa19.9■□□□□ 0.78
TRAPPC2L-209ENST00000565205 PLA2R1Q13018 1463 aa19.9■□□□□ 0.78
TRAPPC2L-209ENST00000565205 ADGRL2O95490 1459 aa19.89■□□□□ 0.77
TRAPPC2L-209ENST00000565205 CHIC2Q9UKJ5 165 aa19.89■□□□□ 0.77
TRAPPC2L-209ENST00000565205 WASHC2CQ9Y4E1 1318 aa19.89■□□□□ 0.77
TRAPPC2L-209ENST00000565205 ALKQ9UM73 1620 aa19.88■□□□□ 0.77
TRAPPC2L-209ENST00000565205 PKD2Q13563 968 aa19.87■□□□□ 0.77
TRAPPC2L-209ENST00000565205 PTPRKQ15262 1439 aa19.86■□□□□ 0.77
TRAPPC2L-209ENST00000565205 MROH1Q8NDA8 1641 aa19.85■□□□□ 0.77
TRAPPC2L-209ENST00000565205 PZPP20742 1482 aa19.85■□□□□ 0.77
TRAPPC2L-209ENST00000565205 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP19.84■□□□□ 0.77
TRAPPC2L-209ENST00000565205 ABCC3O15438 1527 aa19.84■□□□□ 0.77
TRAPPC2L-209ENST00000565205 PRDM15P57071 1507 aaPredicted RBP19.84■□□□□ 0.77
TRAPPC2L-209ENST00000565205 DEPDC5O75140 1603 aa19.83■□□□□ 0.76
TRAPPC2L-209ENST00000565205 CEP152O94986 1710 aa19.82■□□□□ 0.76
TRAPPC2L-209ENST00000565205 NEURL4Q96JN8 1562 aa19.82■□□□□ 0.76
TRAPPC2L-209ENST00000565205 PHF23Q9BUL5 403 aaPredicted RBP19.81■□□□□ 0.76
TRAPPC2L-209ENST00000565205 SENP3Q9H4L4 574 aaPredicted RBP19.81■□□□□ 0.76
TRAPPC2L-209ENST00000565205 KANK1Q14678 1352 aa19.81■□□□□ 0.76
TRAPPC2L-209ENST00000565205 ROCK1Q13464 1354 aa19.79■□□□□ 0.76
TRAPPC2L-209ENST00000565205 POLR1AO95602 1720 aaPredicted RBP19.79■□□□□ 0.76
TRAPPC2L-209ENST00000565205 RRBP1Q9P2E9 1410 aaKnown RBP19.78■□□□□ 0.76
TRAPPC2L-209ENST00000565205 ANKRD50Q9ULJ7 1429 aa19.78■□□□□ 0.76
TRAPPC2L-209ENST00000565205 TOM1O60784 492 aa19.78■□□□□ 0.76
TRAPPC2L-209ENST00000565205 TNRQ92752 1358 aa19.78■□□□□ 0.76
TRAPPC2L-209ENST00000565205 CPS1P31327 1500 aa19.76■□□□□ 0.75
TRAPPC2L-209ENST00000565205 ITGAEP38570 1179 aa19.76■□□□□ 0.75
TRAPPC2L-209ENST00000565205 GRWD1Q9BQ67 446 aaKnown RBP eCLIP19.76■□□□□ 0.752e-6■■■□□ 19.1
TRAPPC2L-209ENST00000565205 RGS17Q9UGC6 210 aaPredicted RBP19.75■□□□□ 0.75
TRAPPC2L-209ENST00000565205 VWDEQ8N2E2 1590 aa19.74■□□□□ 0.75
TRAPPC2L-209ENST00000565205 A2ML1A8K2U0 1454 aa19.74■□□□□ 0.75
TRAPPC2L-209ENST00000565205 FBXO31Q5XUX0 539 aaPredicted RBP19.73■□□□□ 0.75
TRAPPC2L-209ENST00000565205 NLRP1Q9C000 1473 aa19.73■□□□□ 0.75
TRAPPC2L-209ENST00000565205 ERVK-7P63135 1459 aa19.72■□□□□ 0.75
TRAPPC2L-209ENST00000565205 ARHGAP31Q2M1Z3 1444 aa19.71■□□□□ 0.75
TRAPPC2L-209ENST00000565205 STRCP1A6NGW2 1772 aa19.71■□□□□ 0.75
TRAPPC2L-209ENST00000565205 LMTK2Q8IWU2 1503 aa19.71■□□□□ 0.75
TRAPPC2L-209ENST00000565205 CFAP65Q6ZU64 1925 aaKnown RBP19.7■□□□□ 0.74
TRAPPC2L-209ENST00000565205 UNC13BO14795 1591 aa19.69■□□□□ 0.74
TRAPPC2L-209ENST00000565205 EFCAB6Q5THR3 1501 aa19.66■□□□□ 0.74
TRAPPC2L-209ENST00000565205 UGGT1Q9NYU2 1555 aa19.66■□□□□ 0.74
TRAPPC2L-209ENST00000565205 TET3O43151 1660 aa19.65■□□□□ 0.74
TRAPPC2L-209ENST00000565205 GCC2Q8IWJ2 1684 aa19.63■□□□□ 0.73
TRAPPC2L-209ENST00000565205 RPRD2Q5VT52 1461 aaKnown RBP19.62■□□□□ 0.73
TRAPPC2L-209ENST00000565205 THEMISQ8N1K5 641 aaPredicted RBP19.61■□□□□ 0.73
TRAPPC2L-209ENST00000565205 IQGAP3Q86VI3 1631 aa19.61■□□□□ 0.73
TRAPPC2L-209ENST00000565205 LRRC7Q96NW7 1537 aa19.61■□□□□ 0.73
TRAPPC2L-209ENST00000565205 NPHP4O75161 1426 aaPredicted RBP19.59■□□□□ 0.73
TRAPPC2L-209ENST00000565205 POTEAQ6S8J7 498 aa19.58■□□□□ 0.72
TRAPPC2L-209ENST00000565205 UBR1Q8IWV7 1749 aa19.58■□□□□ 0.72
TRAPPC2L-209ENST00000565205 SETD1AO15047 1707 aaKnown RBP19.57■□□□□ 0.72
TRAPPC2L-209ENST00000565205 IQGAP1P46940 1657 aa19.57■□□□□ 0.72
TRAPPC2L-209ENST00000565205 NUP155O75694 1391 aa19.57■□□□□ 0.72
TRAPPC2L-209ENST00000565205 MED14O60244 1454 aa19.56■□□□□ 0.72
TRAPPC2L-209ENST00000565205 ANKLE2Q86XL3 938 aa19.56■□□□□ 0.72
TRAPPC2L-209ENST00000565205 NOS1P29475 1434 aa19.56■□□□□ 0.72
TRAPPC2L-209ENST00000565205 NAIPQ13075 1403 aa19.56■□□□□ 0.72
TRAPPC2L-209ENST00000565205 PIK3C2BO00750 1634 aa19.55■□□□□ 0.72
TRAPPC2L-209ENST00000565205 HFM1A2PYH4 1435 aa19.55■□□□□ 0.72
TRAPPC2L-209ENST00000565205 SYNMO15061 1565 aa19.55■□□□□ 0.72
TRAPPC2L-209ENST00000565205 KDM5AP29375 1690 aaKnown RBP19.54■□□□□ 0.72
TRAPPC2L-209ENST00000565205 XIRP1Q702N8 1843 aaKnown RBP19.53■□□□□ 0.72
TRAPPC2L-209ENST00000565205 E9PCH4 1651 aa19.53■□□□□ 0.72
TRAPPC2L-209ENST00000565205 STAG3Q9UJ98 1225 aa19.53■□□□□ 0.72
TRAPPC2L-209ENST00000565205 SLC52A1Q9NWF4 448 aa19.5■□□□□ 0.71
TRAPPC2L-209ENST00000565205 ADGRB3O60242 1522 aa19.49■□□□□ 0.71
TRAPPC2L-209ENST00000565205 SLIT1O75093 1534 aa19.49■□□□□ 0.71
Retrieved 100 of 20,778 RNA–protein pairs in 55 ms