RNA–Protein interactions for RNA: ENST00000564111.5

SNX29-203, Transcript of sorting nexin 29, humanhuman

TSL 2

Gene SNX29, Length 2,248 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX29-203ENST00000564111 ZMYM3Q14202 1370 aa23.07■■□□□ 1.28
SNX29-203ENST00000564111 CEBPAP49715 358 aaPredicted RBP23.06■■□□□ 1.28
SNX29-203ENST00000564111 MYO3AQ8NEV4 1616 aa23.05■■□□□ 1.28
SNX29-203ENST00000564111 GGT6Q6P531 493 aa23.04■■□□□ 1.28
SNX29-203ENST00000564111 DMRT2Q9Y5R5 561 aa23.02■■□□□ 1.28
SNX29-203ENST00000564111 DAPK1P53355 1430 aa23.02■■□□□ 1.27
SNX29-203ENST00000564111 PTPRKQ15262 1439 aa23.02■■□□□ 1.27
SNX29-203ENST00000564111 KIF3BO15066 747 aa23.01■■□□□ 1.27
SNX29-203ENST00000564111 ERBINQ96RT1 1412 aa23.01■■□□□ 1.27
SNX29-203ENST00000564111 ABCC5O15440 1437 aa23■■□□□ 1.27
SNX29-203ENST00000564111 PZPP20742 1482 aa22.99■■□□□ 1.27
SNX29-203ENST00000564111 HSPA2P54652 639 aa22.98■■□□□ 1.27
SNX29-203ENST00000564111 STRCQ7RTU9 1775 aa22.97■■□□□ 1.27
SNX29-203ENST00000564111 CEP170BQ9Y4F5 1589 aaPredicted RBP22.97■■□□□ 1.27
SNX29-203ENST00000564111 ANKRD30AQ9BXX3 1397 aa22.95■■□□□ 1.26
SNX29-203ENST00000564111 KIF15Q9NS87 1388 aa22.95■■□□□ 1.26
SNX29-203ENST00000564111 PTPRTO14522 1441 aa22.95■■□□□ 1.26
SNX29-203ENST00000564111 ABCC3O15438 1527 aa22.94■■□□□ 1.26
SNX29-203ENST00000564111 PRDM15P57071 1507 aaPredicted RBP22.94■■□□□ 1.26
SNX29-203ENST00000564111 ADGRL2O95490 1459 aa22.94■■□□□ 1.26
SNX29-203ENST00000564111 PLA2R1Q13018 1463 aa22.94■■□□□ 1.26
SNX29-203ENST00000564111 DEPDC5O75140 1603 aa22.93■■□□□ 1.26
SNX29-203ENST00000564111 NCOA1Q15788 1441 aa22.93■■□□□ 1.26
SNX29-203ENST00000564111 WASHC2CQ9Y4E1 1318 aa22.93■■□□□ 1.26
SNX29-203ENST00000564111 MROH1Q8NDA8 1641 aa22.93■■□□□ 1.26
SNX29-203ENST00000564111 A2ML1A8K2U0 1454 aa22.92■■□□□ 1.26
SNX29-203ENST00000564111 CAMSAP1Q5T5Y3 1602 aa22.91■■□□□ 1.26
SNX29-203ENST00000564111 NLRP1Q9C000 1473 aa22.89■■□□□ 1.26
SNX29-203ENST00000564111 CEP152O94986 1710 aa22.89■■□□□ 1.26
SNX29-203ENST00000564111 TNRQ92752 1358 aa22.89■■□□□ 1.26
SNX29-203ENST00000564111 SPATA31D1Q6ZQQ2 1576 aa22.86■■□□□ 1.25
SNX29-203ENST00000564111 KANK1Q14678 1352 aa22.86■■□□□ 1.25
SNX29-203ENST00000564111 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP22.84■■□□□ 1.25
SNX29-203ENST00000564111 POLR1AO95602 1720 aaPredicted RBP22.84■■□□□ 1.25
SNX29-203ENST00000564111 PKD2Q13563 968 aa22.84■■□□□ 1.25
SNX29-203ENST00000564111 ARHGAP31Q2M1Z3 1444 aa22.83■■□□□ 1.25
SNX29-203ENST00000564111 LMTK2Q8IWU2 1503 aa22.82■■□□□ 1.24
SNX29-203ENST00000564111 FAM50AQ14320 339 aaKnown RBP22.81■■□□□ 1.24
SNX29-203ENST00000564111 ERVK-7P63135 1459 aa22.81■■□□□ 1.24
SNX29-203ENST00000564111 VWDEQ8N2E2 1590 aa22.8■■□□□ 1.24
SNX29-203ENST00000564111 RRP7BPQ9NSQ0 103 aa22.8■■□□□ 1.24
SNX29-203ENST00000564111 CERKQ8TCT0 537 aa22.78■■□□□ 1.24
SNX29-203ENST00000564111 ROCK1Q13464 1354 aa22.77■■□□□ 1.24
SNX29-203ENST00000564111 IQSEC2Q5JU85 1478 aa22.77■■□□□ 1.23
SNX29-203ENST00000564111 UGGT1Q9NYU2 1555 aa22.75■■□□□ 1.23
SNX29-203ENST00000564111 KDM5AP29375 1690 aaKnown RBP22.74■■□□□ 1.23
SNX29-203ENST00000564111 ANKRD50Q9ULJ7 1429 aa22.73■■□□□ 1.23
SNX29-203ENST00000564111 UNC13BO14795 1591 aa22.73■■□□□ 1.23
SNX29-203ENST00000564111 THEMISQ8N1K5 641 aaPredicted RBP22.72■■□□□ 1.23
SNX29-203ENST00000564111 EFCAB6Q5THR3 1501 aa22.72■■□□□ 1.23
SNX29-203ENST00000564111 FBXO31Q5XUX0 539 aaPredicted RBP22.71■■□□□ 1.23
SNX29-203ENST00000564111 CHIC2Q9UKJ5 165 aa22.71■■□□□ 1.23
SNX29-203ENST00000564111 GCC2Q8IWJ2 1684 aa22.7■■□□□ 1.23
SNX29-203ENST00000564111 TET3O43151 1660 aa22.7■■□□□ 1.22
SNX29-203ENST00000564111 UBR1Q8IWV7 1749 aa22.69■■□□□ 1.22
SNX29-203ENST00000564111 RPRD2Q5VT52 1461 aaKnown RBP22.69■■□□□ 1.22
SNX29-203ENST00000564111 NEURL4Q96JN8 1562 aa22.67■■□□□ 1.22
SNX29-203ENST00000564111 LTBP4Q8N2S1 1624 aa22.66■■□□□ 1.22
SNX29-203ENST00000564111 NCKAP5LQ9HCH0 1330 aa22.66■■□□□ 1.22
SNX29-203ENST00000564111 MED14O60244 1454 aa22.65■■□□□ 1.22
SNX29-203ENST00000564111 CFAP65Q6ZU64 1925 aaKnown RBP22.65■■□□□ 1.22
SNX29-203ENST00000564111 RRBP1Q9P2E9 1410 aaKnown RBP22.65■■□□□ 1.22
SNX29-203ENST00000564111 ANKLE2Q86XL3 938 aa22.64■■□□□ 1.21
SNX29-203ENST00000564111 GRWD1Q9BQ67 446 aaKnown RBP eCLIP22.64■■□□□ 1.21
SNX29-203ENST00000564111 IQGAP3Q86VI3 1631 aa22.63■■□□□ 1.21
SNX29-203ENST00000564111 IQGAP1P46940 1657 aa22.63■■□□□ 1.21
SNX29-203ENST00000564111 SLIT1O75093 1534 aa22.61■■□□□ 1.21
SNX29-203ENST00000564111 PIK3C2BO00750 1634 aa22.6■■□□□ 1.21
SNX29-203ENST00000564111 CPS1P31327 1500 aa22.6■■□□□ 1.21
SNX29-203ENST00000564111 NPHP4O75161 1426 aaPredicted RBP22.59■■□□□ 1.21
SNX29-203ENST00000564111 NOS1P29475 1434 aa22.59■■□□□ 1.21
SNX29-203ENST00000564111 ARHGAP23Q9P227 1491 aa22.58■■□□□ 1.21
SNX29-203ENST00000564111 SYNMO15061 1565 aa22.57■■□□□ 1.2
SNX29-203ENST00000564111 ADGRB3O60242 1522 aa22.57■■□□□ 1.2
SNX29-203ENST00000564111 SCAF11Q99590 1463 aaKnown RBP22.55■■□□□ 1.2
SNX29-203ENST00000564111 SLC52A1Q9NWF4 448 aa22.53■■□□□ 1.2
SNX29-203ENST00000564111 E9PCH4 1651 aa22.51■■□□□ 1.19
SNX29-203ENST00000564111 EID1Q9Y6B2 187 aa22.5■■□□□ 1.19
SNX29-203ENST00000564111 STAG3Q9UJ98 1225 aa22.49■■□□□ 1.19
SNX29-203ENST00000564111 ZNF335Q9H4Z2 1342 aaPredicted RBP22.48■■□□□ 1.19
SNX29-203ENST00000564111 TMEM2Q9UHN6 1383 aa22.48■■□□□ 1.19
SNX29-203ENST00000564111 ITGAEP38570 1179 aa22.45■■□□□ 1.18
SNX29-203ENST00000564111 PPARGC1BQ86YN6 1023 aaKnown RBP22.45■■□□□ 1.18
SNX29-203ENST00000564111 NUP155O75694 1391 aa22.44■■□□□ 1.18
SNX29-203ENST00000564111 SPHKAPQ2M3C7 1700 aa22.43■■□□□ 1.18
SNX29-203ENST00000564111 TMEM131LA2VDJ0 1609 aa22.42■■□□□ 1.18
SNX29-203ENST00000564111 HDGFP51858 240 aaKnown RBP22.41■■□□□ 1.18
SNX29-203ENST00000564111 IDI1Q13907 227 aa22.41■■□□□ 1.18
SNX29-203ENST00000564111 TXNDC2Q86VQ3 553 aa22.41■■□□□ 1.18
SNX29-203ENST00000564111 HFM1A2PYH4 1435 aa22.41■■□□□ 1.18
SNX29-203ENST00000564111 NAIPQ13075 1403 aa22.4■■□□□ 1.18
SNX29-203ENST00000564111 ACIN1Q9UKV3 1341 aaKnown RBP22.39■■□□□ 1.18
SNX29-203ENST00000564111 MYO5BQ9ULV0 1848 aa22.39■■□□□ 1.17
SNX29-203ENST00000564111 DIP2AQ14689 1571 aa22.35■■□□□ 1.17
SNX29-203ENST00000564111 ABCF1Q8NE71 845 aaKnown RBP eCLIP22.34■■□□□ 1.17
SNX29-203ENST00000564111 STRCP1A6NGW2 1772 aa22.34■■□□□ 1.17
SNX29-203ENST00000564111 ZFYVE9O95405 1425 aa22.33■■□□□ 1.17
SNX29-203ENST00000564111 LTKP29376 864 aa22.33■■□□□ 1.17
SNX29-203ENST00000564111 RIMS2Q9UQ26 1411 aa22.32■■□□□ 1.16
SNX29-203ENST00000564111 NWD1Q149M9 1564 aa22.32■■□□□ 1.16
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms