RNA–Protein interactions for RNA: ENST00000563825.1

AC009117.3-202, humanhuman

TSL 4 BASIC

Gene AC009117.3, Length 557 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC009117.3-202ENST00000563825 BICRAQ9NZM4 1560 aa8.34□□□□□ -1.07
AC009117.3-202ENST00000563825 RUSC2Q8N2Y8 1516 aa8.34□□□□□ -1.08
AC009117.3-202ENST00000563825 CLSPNQ9HAW4 1339 aa8.33□□□□□ -1.08
AC009117.3-202ENST00000563825 UPF1Q92900 1129 aaKnown RBP eCLIP8.33□□□□□ -1.08
AC009117.3-202ENST00000563825 KIF21BO75037 1637 aa8.32□□□□□ -1.08
AC009117.3-202ENST00000563825 VPS8Q8N3P4 1428 aa8.32□□□□□ -1.08
AC009117.3-202ENST00000563825 RNF166Q96A37 237 aaPredicted RBP8.32□□□□□ -1.08
AC009117.3-202ENST00000563825 TSHZ2Q9NRE2 1034 aa8.32□□□□□ -1.08
AC009117.3-202ENST00000563825 EMILIN3Q9NT22 766 aa8.32□□□□□ -1.08
AC009117.3-202ENST00000563825 TBC1D12O60347 775 aa8.31□□□□□ -1.08
AC009117.3-202ENST00000563825 VSIG10Q8N0Z9 540 aa8.3□□□□□ -1.08
AC009117.3-202ENST00000563825 ZNF687Q8N1G0 1237 aa8.3□□□□□ -1.08
AC009117.3-202ENST00000563825 CAMK2BQ13554 666 aa8.28□□□□□ -1.08
AC009117.3-202ENST00000563825 NEUROD1Q13562 356 aa8.28□□□□□ -1.08
AC009117.3-202ENST00000563825 UNC13AQ9UPW8 1703 aa8.28□□□□□ -1.08
AC009117.3-202ENST00000563825 POTEEQ6S8J3 1075 aa8.27□□□□□ -1.09
AC009117.3-202ENST00000563825 ANO8Q9HCE9 1232 aaPredicted RBP8.27□□□□□ -1.09
AC009117.3-202ENST00000563825 MYT1LQ9UL68 1186 aa8.26□□□□□ -1.09
AC009117.3-202ENST00000563825 TTBK1Q5TCY1 1321 aaPredicted RBP8.26□□□□□ -1.09
AC009117.3-202ENST00000563825 MAP3K9P80192 1104 aa8.25□□□□□ -1.09
AC009117.3-202ENST00000563825 SYNJ1O43426 1573 aa8.25□□□□□ -1.09
AC009117.3-202ENST00000563825 NCAPD3P42695 1498 aa8.25□□□□□ -1.09
AC009117.3-202ENST00000563825 EVI5O60447 810 aa8.24□□□□□ -1.09
AC009117.3-202ENST00000563825 PRXQ9BXM0 1461 aa8.24□□□□□ -1.09
AC009117.3-202ENST00000563825 MYT1Q01538 1121 aa8.23□□□□□ -1.09
AC009117.3-202ENST00000563825 KDM2AQ9Y2K7 1162 aa8.23□□□□□ -1.09
AC009117.3-202ENST00000563825 AXIN2Q9Y2T1 843 aa8.23□□□□□ -1.09
AC009117.3-202ENST00000563825 GTF3C3Q9Y5Q9 886 aa8.23□□□□□ -1.09
AC009117.3-202ENST00000563825 RAPGEF2Q9Y4G8 1499 aa8.23□□□□□ -1.09
AC009117.3-202ENST00000563825 ERICH3Q5RHP9 1530 aa8.23□□□□□ -1.09
AC009117.3-202ENST00000563825 TOP2BQ02880 1626 aa8.22□□□□□ -1.09
AC009117.3-202ENST00000563825 KIF27Q86VH2 1401 aa8.2□□□□□ -1.1
AC009117.3-202ENST00000563825 DPYSL4O14531 572 aa8.2□□□□□ -1.1
AC009117.3-202ENST00000563825 E2F4Q16254 413 aa8.19□□□□□ -1.1
AC009117.3-202ENST00000563825 WDR70Q9NW82 654 aa8.19□□□□□ -1.1
AC009117.3-202ENST00000563825 HMGXB3Q12766 1538 aa8.19□□□□□ -1.1
AC009117.3-202ENST00000563825 PSDA5PKW4 1024 aaPredicted RBP8.18□□□□□ -1.1
AC009117.3-202ENST00000563825 FOSBP53539 338 aa8.18□□□□□ -1.1
AC009117.3-202ENST00000563825 PSEN2P49810 448 aa8.17□□□□□ -1.1
AC009117.3-202ENST00000563825 ANKRD13DQ6ZTN6 518 aa8.17□□□□□ -1.1
AC009117.3-202ENST00000563825 ZNF454Q8N9F8 522 aa8.17□□□□□ -1.1
AC009117.3-202ENST00000563825 ARHGAP33O14559 1287 aa8.16□□□□□ -1.1
AC009117.3-202ENST00000563825 CFTRP13569 1480 aa8.16□□□□□ -1.1
AC009117.3-202ENST00000563825 PTGER2P43116 358 aa8.16□□□□□ -1.1
AC009117.3-202ENST00000563825 PPP4R3BQ5MIZ7 849 aa8.16□□□□□ -1.1
AC009117.3-202ENST00000563825 RRBP1Q9P2E9 1410 aaKnown RBP8.16□□□□□ -1.1
AC009117.3-202ENST00000563825 BIVM-ERCC5R4GMW8 1640 aa8.16□□□□□ -1.1
AC009117.3-202ENST00000563825 LSM11P83369 360 aaKnown RBP eCLIP8.15□□□□□ -1.1
AC009117.3-202ENST00000563825 DMRTA1Q5VZB9 504 aa8.15□□□□□ -1.1
AC009117.3-202ENST00000563825 PCDHGA10Q9Y5H3 936 aa8.15□□□□□ -1.1
AC009117.3-202ENST00000563825 DHX57Q6P158 1386 aaKnown RBP8.14□□□□□ -1.11
AC009117.3-202ENST00000563825 PBX2P40425 430 aa8.14□□□□□ -1.11
AC009117.3-202ENST00000563825 CUX2O14529 1486 aa8.13□□□□□ -1.11
AC009117.3-202ENST00000563825 ARAP1Q96P48 1450 aa8.13□□□□□ -1.11
AC009117.3-202ENST00000563825 JPH4Q96JJ6 628 aa8.13□□□□□ -1.11
AC009117.3-202ENST00000563825 ADAM33Q9BZ11 813 aa8.13□□□□□ -1.11
AC009117.3-202ENST00000563825 ARIH1Q9Y4X5 557 aaPredicted RBP8.13□□□□□ -1.11
AC009117.3-202ENST00000563825 ZDHHC16Q969W1 377 aa8.12□□□□□ -1.11
AC009117.3-202ENST00000563825 MAP3K1Q13233 1512 aa8.12□□□□□ -1.11
AC009117.3-202ENST00000563825 IGF1RP08069 1367 aa8.11□□□□□ -1.11
AC009117.3-202ENST00000563825 CCNB3Q8WWL7 1395 aa8.11□□□□□ -1.11
AC009117.3-202ENST00000563825 KANK4Q5T7N3 995 aaPredicted RBP8.11□□□□□ -1.11
AC009117.3-202ENST00000563825 BCL2L12Q9HB09 334 aa8.11□□□□□ -1.11
AC009117.3-202ENST00000563825 TIMELESSQ9UNS1 1208 aa8.11□□□□□ -1.11
AC009117.3-202ENST00000563825 CUX1P39880 1505 aa8.11□□□□□ -1.11
AC009117.3-202ENST00000563825 DDX12PQ92771 950 aa8.1□□□□□ -1.11
AC009117.3-202ENST00000563825 KCNK17Q96T54 332 aa8.1□□□□□ -1.11
AC009117.3-202ENST00000563825 PHF14O94880 888 aa8.09□□□□□ -1.11
AC009117.3-202ENST00000563825 RANGAP1P46060 587 aaPredicted RBP8.09□□□□□ -1.11
AC009117.3-202ENST00000563825 PDIA6Q15084 440 aa8.09□□□□□ -1.11
AC009117.3-202ENST00000563825 CADPSQ9ULU8 1353 aa8.09□□□□□ -1.12
AC009117.3-202ENST00000563825 SPDYE16A6NNV3 312 aaPredicted RBP8.08□□□□□ -1.12
AC009117.3-202ENST00000563825 CARMIL1Q5VZK9 1371 aa8.08□□□□□ -1.12
AC009117.3-202ENST00000563825 ARHGAP35Q9NRY4 1499 aa8.07□□□□□ -1.12
AC009117.3-202ENST00000563825 ADGRD1Q6QNK2 874 aa8.07□□□□□ -1.12
AC009117.3-202ENST00000563825 KCNV2Q8TDN2 545 aa8.07□□□□□ -1.12
AC009117.3-202ENST00000563825 FHAD1B1AJZ9 1412 aa8.06□□□□□ -1.12
AC009117.3-202ENST00000563825 HRO43593 1189 aa8.06□□□□□ -1.12
AC009117.3-202ENST00000563825 PTPREP23469 700 aa8.06□□□□□ -1.12
AC009117.3-202ENST00000563825 PRIM1P49642 420 aaKnown RBP8.06□□□□□ -1.12
AC009117.3-202ENST00000563825 TYW1BQ6NUM6 668 aa8.06□□□□□ -1.12
AC009117.3-202ENST00000563825 YTHDC1Q96MU7 727 aaKnown RBP8.06□□□□□ -1.12
AC009117.3-202ENST00000563825 TK2O00142 265 aa8.05□□□□□ -1.12
AC009117.3-202ENST00000563825 COL9A1P20849 921 aa8.05□□□□□ -1.12
AC009117.3-202ENST00000563825 RBM33Q96EV2 1170 aaKnown RBP8.05□□□□□ -1.12
AC009117.3-202ENST00000563825 EPAS1Q99814 870 aa8.05□□□□□ -1.12
AC009117.3-202ENST00000563825 VPS9D1Q9Y2B5 631 aa8.05□□□□□ -1.12
AC009117.3-202ENST00000563825 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP8.05□□□□□ -1.12
AC009117.3-202ENST00000563825 C6orf132Q5T0Z8 1188 aa8.04□□□□□ -1.12
AC009117.3-202ENST00000563825 ARHGEF1Q92888 912 aaKnown RBP8.04□□□□□ -1.12
AC009117.3-202ENST00000563825 FBXW7Q969H0 707 aa8.04□□□□□ -1.12
AC009117.3-202ENST00000563825 ZBED2Q9BTP6 218 aa8.04□□□□□ -1.12
AC009117.3-202ENST00000563825 SETD5Q9C0A6 1442 aa8.03□□□□□ -1.12
AC009117.3-202ENST00000563825 GRXCR2A6NFK2 248 aa8.03□□□□□ -1.12
AC009117.3-202ENST00000563825 SLC4A5Q9BY07 1137 aa8.03□□□□□ -1.12
AC009117.3-202ENST00000563825 OSBPP22059 807 aa8.02□□□□□ -1.13
AC009117.3-202ENST00000563825 P3H3Q8IVL6 736 aa8.02□□□□□ -1.13
AC009117.3-202ENST00000563825 BHMG1C9JSJ3 638 aaPredicted RBP8.01□□□□□ -1.13
AC009117.3-202ENST00000563825 BCANQ96GW7 911 aa8.01□□□□□ -1.13
AC009117.3-202ENST00000563825 PLA2G2EQ9NZK7 142 aa8.01□□□□□ -1.13
Retrieved 100 of 20,778 RNA–protein pairs in 59.9 ms