RNA–Protein interactions for RNA: ENST00000563825.1

AC009117.3-202, humanhuman

TSL 4 BASIC

Gene AC009117.3, Length 557 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC009117.3-202ENST00000563825 AEBP2Q6ZN18 517 aaPredicted RBP19.04■□□□□ 0.64
AC009117.3-202ENST00000563825 CHIC1Q5VXU3 224 aa18.3■□□□□ 0.52
AC009117.3-202ENST00000563825 SENP3Q9H4L4 574 aaPredicted RBP16.32■□□□□ 0.2
AC009117.3-202ENST00000563825 PHF23Q9BUL5 403 aaPredicted RBP16.16■□□□□ 0.18
AC009117.3-202ENST00000563825 FOXD1Q16676 465 aa15.26■□□□□ 0.03
AC009117.3-202ENST00000563825 POTEDQ86YR6 584 aa14.9□□□□□ -0.02
AC009117.3-202ENST00000563825 PLPPR3Q6T4P5 718 aa14.72□□□□□ -0.05
AC009117.3-202ENST00000563825 MSH5O43196 834 aa14.47□□□□□ -0.09
AC009117.3-202ENST00000563825 PPP6R1Q9UPN7 881 aa14.35□□□□□ -0.11
AC009117.3-202ENST00000563825 ADRA2BP18089 450 aa14.29□□□□□ -0.12
AC009117.3-202ENST00000563825 PIAS4Q8N2W9 510 aaPredicted RBP14.15□□□□□ -0.14
AC009117.3-202ENST00000563825 MAPK8IP2Q13387 824 aaPredicted RBP13.07□□□□□ -0.32
AC009117.3-202ENST00000563825 PPP4R3CPQ6ZMV5 832 aa12.99□□□□□ -0.33
AC009117.3-202ENST00000563825 SCAF1Q9H7N4 1312 aaKnown RBP12.95□□□□□ -0.34
AC009117.3-202ENST00000563825 DMRT2Q9Y5R5 561 aa12.87□□□□□ -0.35
AC009117.3-202ENST00000563825 CACNB1Q02641 598 aaPredicted RBP12.69□□□□□ -0.38
AC009117.3-202ENST00000563825 CNKSR2Q8WXI2 1034 aa12.64□□□□□ -0.39
AC009117.3-202ENST00000563825 NCBP3Q53F19 620 aaKnown RBP12.51□□□□□ -0.41
AC009117.3-202ENST00000563825 HOXD11P31277 338 aaPredicted RBP12.48□□□□□ -0.41
AC009117.3-202ENST00000563825 KCNA4P22459 653 aa12.46□□□□□ -0.41
AC009117.3-202ENST00000563825 RNF216Q9NWF9 866 aaPredicted RBP12.45□□□□□ -0.42
AC009117.3-202ENST00000563825 NPM3O75607 178 aaKnown RBP12.41□□□□□ -0.42
AC009117.3-202ENST00000563825 DCAF8L1A6NGE4 600 aa12.36□□□□□ -0.43
AC009117.3-202ENST00000563825 RNF39Q9H2S5 420 aa12.3□□□□□ -0.44
AC009117.3-202ENST00000563825 C1QBPQ07021 282 aaKnown RBP12.1□□□□□ -0.47
AC009117.3-202ENST00000563825 DNAJC5BQ9UF47 199 aa12.04□□□□□ -0.48
AC009117.3-202ENST00000563825 GRWD1Q9BQ67 446 aaKnown RBP eCLIP11.86□□□□□ -0.51
AC009117.3-202ENST00000563825 SLC4A2P04920 1241 aa11.81□□□□□ -0.52
AC009117.3-202ENST00000563825 SLC4A1APQ9BWU0 796 aaKnown RBP11.78□□□□□ -0.52
AC009117.3-202ENST00000563825 U3KPZ7 1027 aaPredicted RBP11.69□□□□□ -0.54
AC009117.3-202ENST00000563825 POTEHQ6S545 545 aa11.58□□□□□ -0.56
AC009117.3-202ENST00000563825 ZBTB22O15209 634 aa11.49□□□□□ -0.57
AC009117.3-202ENST00000563825 FOXD4L1Q9NU39 408 aa11.46□□□□□ -0.57
AC009117.3-202ENST00000563825 SPINK5Q9NQ38 1064 aaPredicted RBP11.45□□□□□ -0.58
AC009117.3-202ENST00000563825 MYCNP04198 464 aaPredicted RBP11.4□□□□□ -0.58
AC009117.3-202ENST00000563825 DSG3P32926 999 aa11.37□□□□□ -0.59
AC009117.3-202ENST00000563825 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP11.35□□□□□ -0.59
AC009117.3-202ENST00000563825 CAPN15O75808 1086 aa11.35□□□□□ -0.59
AC009117.3-202ENST00000563825 HNRNPUL2Q1KMD3 747 aaKnown RBP11.35□□□□□ -0.59
AC009117.3-202ENST00000563825 SAMD1Q6SPF0 538 aaPredicted RBP11.32□□□□□ -0.6
AC009117.3-202ENST00000563825 NISCHQ9Y2I1 1504 aa11.29□□□□□ -0.6
AC009117.3-202ENST00000563825 TRHP20396 242 aaPredicted RBP11.27□□□□□ -0.61
AC009117.3-202ENST00000563825 APLP2Q06481 763 aa11.24□□□□□ -0.61
AC009117.3-202ENST00000563825 CSRNP3Q8WYN3 585 aa11.24□□□□□ -0.61
AC009117.3-202ENST00000563825 ATF5Q9Y2D1 282 aaPredicted RBP11.24□□□□□ -0.61
AC009117.3-202ENST00000563825 EHMT2Q96KQ7 1210 aa11.2□□□□□ -0.62
AC009117.3-202ENST00000563825 ZNF219Q9P2Y4 722 aaPredicted RBP11.18□□□□□ -0.62
AC009117.3-202ENST00000563825 ABCB7O75027 752 aa11.15□□□□□ -0.62
AC009117.3-202ENST00000563825 ATXN8OSP0DMR3 200 aa11.07□□□□□ -0.64
AC009117.3-202ENST00000563825 POLA2Q14181 598 aa11.06□□□□□ -0.64
AC009117.3-202ENST00000563825 RBM42Q9BTD8 480 aaKnown RBP10.86□□□□□ -0.67
AC009117.3-202ENST00000563825 CHRDL2Q6WN34 429 aa10.8□□□□□ -0.68
AC009117.3-202ENST00000563825 ZBTB12Q9Y330 459 aaPredicted RBP10.73□□□□□ -0.69
AC009117.3-202ENST00000563825 MKRN4PQ13434 485 aaPredicted RBP10.72□□□□□ -0.69
AC009117.3-202ENST00000563825 OSCARQ8IYS5 282 aa10.65□□□□□ -0.7
AC009117.3-202ENST00000563825 SP7Q8TDD2 431 aaPredicted RBP10.65□□□□□ -0.7
AC009117.3-202ENST00000563825 FBLN2P98095 1184 aa10.63□□□□□ -0.71
AC009117.3-202ENST00000563825 AKT1S1Q96B36 256 aa10.51□□□□□ -0.73
AC009117.3-202ENST00000563825 SPDYE2BA6NHP3 402 aa10.48□□□□□ -0.73
AC009117.3-202ENST00000563825 SPDYE6P0CI01 402 aa10.48□□□□□ -0.73
AC009117.3-202ENST00000563825 SPDYE2Q495Y8 402 aa10.48□□□□□ -0.73
AC009117.3-202ENST00000563825 REM2Q8IYK8 340 aaPredicted RBP10.45□□□□□ -0.74
AC009117.3-202ENST00000563825 ZNF692Q9BU19 519 aaPredicted RBP10.45□□□□□ -0.74
AC009117.3-202ENST00000563825 PIP4P2Q8N4L2 257 aa10.44□□□□□ -0.74
AC009117.3-202ENST00000563825 SSUH2Q9Y2M2 353 aa10.41□□□□□ -0.74
AC009117.3-202ENST00000563825 HAX1O00165 279 aa10.39□□□□□ -0.75
AC009117.3-202ENST00000563825 SPDYE4A6NLX3 237 aa10.31□□□□□ -0.76
AC009117.3-202ENST00000563825 PITPNM1O00562 1244 aa10.31□□□□□ -0.76
AC009117.3-202ENST00000563825 FXR2P51116 673 aaKnown RBP eCLIP10.31□□□□□ -0.76
AC009117.3-202ENST00000563825 PABPN1Q86U42 306 aaKnown RBP eCLIP10.31□□□□□ -0.76
AC009117.3-202ENST00000563825 EVX2Q03828 476 aa10.22□□□□□ -0.77
AC009117.3-202ENST00000563825 SPDYE1Q8NFV5 336 aaPredicted RBP10.22□□□□□ -0.77
AC009117.3-202ENST00000563825 CLEC11AQ9Y240 323 aa10.22□□□□□ -0.77
AC009117.3-202ENST00000563825 PROM2Q8N271 834 aa10.12□□□□□ -0.79
AC009117.3-202ENST00000563825 FKBP8Q14318 412 aa10.11□□□□□ -0.79
AC009117.3-202ENST00000563825 PRR29P0C7W0 189 aa10.1□□□□□ -0.79
AC009117.3-202ENST00000563825 PRKAR2AP13861 404 aaKnown RBP10.05□□□□□ -0.8
AC009117.3-202ENST00000563825 CHADLQ6NUI6 762 aa10.04□□□□□ -0.8
AC009117.3-202ENST00000563825 STAG3Q9UJ98 1225 aa10.03□□□□□ -0.8
AC009117.3-202ENST00000563825 C19orf67A6NJJ6 358 aa10□□□□□ -0.81
AC009117.3-202ENST00000563825 LHX8Q68G74 356 aa9.98□□□□□ -0.81
AC009117.3-202ENST00000563825 GABBR2O75899 941 aa9.97□□□□□ -0.81
AC009117.3-202ENST00000563825 CREBZFQ9NS37 354 aa9.96□□□□□ -0.82
AC009117.3-202ENST00000563825 FARP1Q9Y4F1 1045 aaPredicted RBP9.9□□□□□ -0.82
AC009117.3-202ENST00000563825 MNX1P50219 401 aaPredicted RBP9.85□□□□□ -0.83
AC009117.3-202ENST00000563825 MIER1Q8N108 512 aa9.81□□□□□ -0.84
AC009117.3-202ENST00000563825 FBXO3Q9UK99 471 aa9.75□□□□□ -0.85
AC009117.3-202ENST00000563825 POTEIP0CG38 1075 aa9.74□□□□□ -0.85
AC009117.3-202ENST00000563825 CD44P16070 742 aaKnown RBP9.72□□□□□ -0.85
AC009117.3-202ENST00000563825 PLCD3Q8N3E9 789 aa9.72□□□□□ -0.85
AC009117.3-202ENST00000563825 PLSCR2Q9NRY7 297 aa9.72□□□□□ -0.85
AC009117.3-202ENST00000563825 NPM1P06748 294 aaKnown RBP eCLIP9.7□□□□□ -0.86
AC009117.3-202ENST00000563825 CLCN6P51797 869 aa9.67□□□□□ -0.86
AC009117.3-202ENST00000563825 VASPP50552 380 aaPredicted RBP9.66□□□□□ -0.86
AC009117.3-202ENST00000563825 ZRANB1Q9UGI0 708 aa9.66□□□□□ -0.86
AC009117.3-202ENST00000563825 PLEKHG5O94827 1062 aa9.65□□□□□ -0.86
AC009117.3-202ENST00000563825 NUBP1P53384 320 aa9.61□□□□□ -0.87
AC009117.3-202ENST00000563825 RASEFQ8IZ41 740 aa9.61□□□□□ -0.87
AC009117.3-202ENST00000563825 DCBLD2Q96PD2 775 aa9.6□□□□□ -0.87
AC009117.3-202ENST00000563825 TSPYL2Q9H2G4 693 aaPredicted RBP9.6□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 288.3 ms