RNA–Protein interactions for RNA: ENST00000561321.1

SEMA4B-220, Transcript of semaphorin 4B, humanhuman

TSL 2

Gene SEMA4B, Length 563 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA4B-220ENST00000561321 MYO3AQ8NEV4 1616 aa19.14■□□□□ 0.65
SEMA4B-220ENST00000561321 DAPK1P53355 1430 aa19.13■□□□□ 0.65
SEMA4B-220ENST00000561321 SHANK2Q9UPX8 1470 aa19.13■□□□□ 0.65
SEMA4B-220ENST00000561321 DNMT1P26358 1616 aaKnown RBP19.12■□□□□ 0.65
SEMA4B-220ENST00000561321 DUOX2Q9NRD8 1548 aa19.11■□□□□ 0.65
SEMA4B-220ENST00000561321 RRP7BPQ9NSQ0 103 aa19.11■□□□□ 0.65
SEMA4B-220ENST00000561321 RNF17Q9BXT8 1623 aaKnown RBP19.11■□□□□ 0.65
SEMA4B-220ENST00000561321 EIF2AK4Q9P2K8 1649 aaKnown RBP19.11■□□□□ 0.65
SEMA4B-220ENST00000561321 FAM135AQ9P2D6 1515 aa19.1■□□□□ 0.65
SEMA4B-220ENST00000561321 KIF15Q9NS87 1388 aa19.1■□□□□ 0.65
SEMA4B-220ENST00000561321 FAM50AQ14320 339 aaKnown RBP19.1■□□□□ 0.65
SEMA4B-220ENST00000561321 CHIC2Q9UKJ5 165 aa19.1■□□□□ 0.65
SEMA4B-220ENST00000561321 CAMSAP1Q5T5Y3 1602 aa19.1■□□□□ 0.65
SEMA4B-220ENST00000561321 FBXO31Q5XUX0 539 aaPredicted RBP19.09■□□□□ 0.65
SEMA4B-220ENST00000561321 DMRT2Q9Y5R5 561 aa19.09■□□□□ 0.65
SEMA4B-220ENST00000561321 ZNF142P52746 1687 aaPredicted RBP19.08■□□□□ 0.65
SEMA4B-220ENST00000561321 CEP170BQ9Y4F5 1589 aaPredicted RBP19.08■□□□□ 0.65
SEMA4B-220ENST00000561321 PZPP20742 1482 aa19.08■□□□□ 0.64
SEMA4B-220ENST00000561321 NCOA1Q15788 1441 aa19.08■□□□□ 0.64
SEMA4B-220ENST00000561321 PPARGC1BQ86YN6 1023 aaKnown RBP19.06■□□□□ 0.64
SEMA4B-220ENST00000561321 TNRQ92752 1358 aa19.06■□□□□ 0.64
SEMA4B-220ENST00000561321 ABCC3O15438 1527 aa19.05■□□□□ 0.64
SEMA4B-220ENST00000561321 MROH1Q8NDA8 1641 aa19.05■□□□□ 0.64
SEMA4B-220ENST00000561321 ZC3H13Q5T200 1668 aaKnown RBP19.05■□□□□ 0.64
SEMA4B-220ENST00000561321 CEP152O94986 1710 aa19.04■□□□□ 0.64
SEMA4B-220ENST00000561321 ERBINQ96RT1 1412 aa19.04■□□□□ 0.64
SEMA4B-220ENST00000561321 ANKRD30AQ9BXX3 1397 aa19.04■□□□□ 0.64
SEMA4B-220ENST00000561321 NCKAP5LQ9HCH0 1330 aa19.03■□□□□ 0.64
SEMA4B-220ENST00000561321 FBXO41Q8TF61 875 aa19.03■□□□□ 0.64
SEMA4B-220ENST00000561321 A2ML1A8K2U0 1454 aa19.03■□□□□ 0.64
SEMA4B-220ENST00000561321 PTPRTO14522 1441 aa19.02■□□□□ 0.64
SEMA4B-220ENST00000561321 GRWD1Q9BQ67 446 aaKnown RBP eCLIP19.02■□□□□ 0.64
SEMA4B-220ENST00000561321 CERKQ8TCT0 537 aa19■□□□□ 0.63
SEMA4B-220ENST00000561321 CFAP65Q6ZU64 1925 aaKnown RBP19■□□□□ 0.63
SEMA4B-220ENST00000561321 PRDM15P57071 1507 aaPredicted RBP18.99■□□□□ 0.63
SEMA4B-220ENST00000561321 PLA2R1Q13018 1463 aa18.98■□□□□ 0.63
SEMA4B-220ENST00000561321 ADGRL2O95490 1459 aa18.97■□□□□ 0.63
SEMA4B-220ENST00000561321 PKD2Q13563 968 aa18.96■□□□□ 0.63
SEMA4B-220ENST00000561321 DEPDC5O75140 1603 aa18.96■□□□□ 0.63
SEMA4B-220ENST00000561321 SPATA31D1Q6ZQQ2 1576 aa18.95■□□□□ 0.62
SEMA4B-220ENST00000561321 ERVK-7P63135 1459 aa18.95■□□□□ 0.62
SEMA4B-220ENST00000561321 NLRP1Q9C000 1473 aa18.95■□□□□ 0.62
SEMA4B-220ENST00000561321 KANK1Q14678 1352 aa18.94■□□□□ 0.62
SEMA4B-220ENST00000561321 UGGT1Q9NYU2 1555 aa18.93■□□□□ 0.62
SEMA4B-220ENST00000561321 ITGAEP38570 1179 aa18.92■□□□□ 0.62
SEMA4B-220ENST00000561321 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP18.92■□□□□ 0.62
SEMA4B-220ENST00000561321 POLR1AO95602 1720 aaPredicted RBP18.91■□□□□ 0.62
SEMA4B-220ENST00000561321 THEMISQ8N1K5 641 aaPredicted RBP18.9■□□□□ 0.62
SEMA4B-220ENST00000561321 ANKRD50Q9ULJ7 1429 aa18.9■□□□□ 0.62
SEMA4B-220ENST00000561321 ARHGAP31Q2M1Z3 1444 aa18.89■□□□□ 0.61
SEMA4B-220ENST00000561321 LTBP4Q8N2S1 1624 aa18.89■□□□□ 0.61
SEMA4B-220ENST00000561321 ZNF335Q9H4Z2 1342 aaPredicted RBP18.88■□□□□ 0.61
SEMA4B-220ENST00000561321 ANKLE2Q86XL3 938 aa18.87■□□□□ 0.61
SEMA4B-220ENST00000561321 VWDEQ8N2E2 1590 aa18.87■□□□□ 0.61
SEMA4B-220ENST00000561321 NEURL4Q96JN8 1562 aa18.86■□□□□ 0.61
SEMA4B-220ENST00000561321 LMTK2Q8IWU2 1503 aa18.85■□□□□ 0.61
SEMA4B-220ENST00000561321 UBR1Q8IWV7 1749 aa18.84■□□□□ 0.61
SEMA4B-220ENST00000561321 ROCK1Q13464 1354 aa18.83■□□□□ 0.61
SEMA4B-220ENST00000561321 EFCAB6Q5THR3 1501 aa18.83■□□□□ 0.6
SEMA4B-220ENST00000561321 NPHP4O75161 1426 aaPredicted RBP18.81■□□□□ 0.6
SEMA4B-220ENST00000561321 PIK3C2BO00750 1634 aa18.81■□□□□ 0.6
SEMA4B-220ENST00000561321 STAG3Q9UJ98 1225 aa18.79■□□□□ 0.6
SEMA4B-220ENST00000561321 UNC13BO14795 1591 aa18.79■□□□□ 0.6
SEMA4B-220ENST00000561321 SYNMO15061 1565 aa18.78■□□□□ 0.6
SEMA4B-220ENST00000561321 IQGAP1P46940 1657 aa18.78■□□□□ 0.6
SEMA4B-220ENST00000561321 MED14O60244 1454 aa18.77■□□□□ 0.6
SEMA4B-220ENST00000561321 RRBP1Q9P2E9 1410 aaKnown RBP18.77■□□□□ 0.6
SEMA4B-220ENST00000561321 TET3O43151 1660 aa18.77■□□□□ 0.6
SEMA4B-220ENST00000561321 IQSEC2Q5JU85 1478 aa18.76■□□□□ 0.59
SEMA4B-220ENST00000561321 NOS1P29475 1434 aa18.75■□□□□ 0.59
SEMA4B-220ENST00000561321 IDI1Q13907 227 aa18.75■□□□□ 0.59
SEMA4B-220ENST00000561321 GCC2Q8IWJ2 1684 aa18.75■□□□□ 0.59
SEMA4B-220ENST00000561321 SCAF11Q99590 1463 aaKnown RBP18.74■□□□□ 0.59
SEMA4B-220ENST00000561321 TXNDC2Q86VQ3 553 aa18.74■□□□□ 0.59
SEMA4B-220ENST00000561321 SLIT1O75093 1534 aa18.74■□□□□ 0.59
SEMA4B-220ENST00000561321 RPRD2Q5VT52 1461 aaKnown RBP18.73■□□□□ 0.59
SEMA4B-220ENST00000561321 ARHGAP23Q9P227 1491 aa18.73■□□□□ 0.59
SEMA4B-220ENST00000561321 LTKP29376 864 aa18.73■□□□□ 0.59
SEMA4B-220ENST00000561321 EID1Q9Y6B2 187 aa18.72■□□□□ 0.59
SEMA4B-220ENST00000561321 IQGAP3Q86VI3 1631 aa18.71■□□□□ 0.59
SEMA4B-220ENST00000561321 NUP155O75694 1391 aa18.71■□□□□ 0.59
SEMA4B-220ENST00000561321 TMEM2Q9UHN6 1383 aa18.71■□□□□ 0.59
SEMA4B-220ENST00000561321 ADGRB3O60242 1522 aa18.7■□□□□ 0.58
SEMA4B-220ENST00000561321 CPS1P31327 1500 aa18.7■□□□□ 0.58
SEMA4B-220ENST00000561321 E9PCH4 1651 aa18.7■□□□□ 0.58
SEMA4B-220ENST00000561321 KDM5AP29375 1690 aaKnown RBP18.7■□□□□ 0.58
SEMA4B-220ENST00000561321 UBAP1LF5GYI3 381 aa18.7■□□□□ 0.58
SEMA4B-220ENST00000561321 SLC52A1Q9NWF4 448 aa18.7■□□□□ 0.58
SEMA4B-220ENST00000561321 STRCP1A6NGW2 1772 aa18.66■□□□□ 0.58
SEMA4B-220ENST00000561321 MYO5BQ9ULV0 1848 aa18.66■□□□□ 0.58
SEMA4B-220ENST00000561321 CHGAP10645 457 aaKnown RBP18.65■□□□□ 0.58
SEMA4B-220ENST00000561321 SENP3Q9H4L4 574 aaPredicted RBP18.64■□□□□ 0.57
SEMA4B-220ENST00000561321 NAIPQ13075 1403 aa18.64■□□□□ 0.57
SEMA4B-220ENST00000561321 TMEM131LA2VDJ0 1609 aa18.61■□□□□ 0.57
SEMA4B-220ENST00000561321 SCAF1Q9H7N4 1312 aaKnown RBP18.61■□□□□ 0.57
SEMA4B-220ENST00000561321 BCANQ96GW7 911 aa18.61■□□□□ 0.57
SEMA4B-220ENST00000561321 PPP1R15AO75807 674 aaPredicted RBP18.59■□□□□ 0.57
SEMA4B-220ENST00000561321 PIP4K2BP78356 416 aa18.59■□□□□ 0.57
SEMA4B-220ENST00000561321 SLC26A8Q96RN1 970 aa18.59■□□□□ 0.57
SEMA4B-220ENST00000561321 LRRC7Q96NW7 1537 aa18.59■□□□□ 0.57
Retrieved 100 of 20,778 RNA–protein pairs in 72 ms