RNA–Protein interactions for RNA: ENST00000560428.1

TNFAIP2-206, Transcript of TNF alpha induced protein 2, humanhuman

TSL 5

Gene TNFAIP2, Length 773 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFAIP2-206ENST00000560428 TCOF1Q13428 1488 aaKnown RBP28.1■■■□□ 2.09
TNFAIP2-206ENST00000560428 MYO3AQ8NEV4 1616 aa28.09■■■□□ 2.09
TNFAIP2-206ENST00000560428 RNF17Q9BXT8 1623 aaKnown RBP28.09■■■□□ 2.09
TNFAIP2-206ENST00000560428 ZNF142P52746 1687 aaPredicted RBP28.09■■■□□ 2.09
TNFAIP2-206ENST00000560428 DMRT2Q9Y5R5 561 aa28.08■■■□□ 2.09
TNFAIP2-206ENST00000560428 ABCC5O15440 1437 aa28.06■■■□□ 2.08
TNFAIP2-206ENST00000560428 DNMT1P26358 1616 aaKnown RBP28.06■■■□□ 2.08
TNFAIP2-206ENST00000560428 DUOX2Q9NRD8 1548 aa28.05■■■□□ 2.08
TNFAIP2-206ENST00000560428 PZPP20742 1482 aa28.03■■■□□ 2.08
TNFAIP2-206ENST00000560428 NCOA1Q15788 1441 aa28.03■■■□□ 2.08
TNFAIP2-206ENST00000560428 WASHC2CQ9Y4E1 1318 aa28.03■■■□□ 2.08
TNFAIP2-206ENST00000560428 CEP170BQ9Y4F5 1589 aaPredicted RBP28.03■■■□□ 2.08
TNFAIP2-206ENST00000560428 DAPK1P53355 1430 aa28.02■■■□□ 2.08
TNFAIP2-206ENST00000560428 ZC3H13Q5T200 1668 aaKnown RBP28.02■■■□□ 2.08
TNFAIP2-206ENST00000560428 PTPRTO14522 1441 aa28.01■■■□□ 2.08
TNFAIP2-206ENST00000560428 CAMSAP1Q5T5Y3 1602 aa28■■■□□ 2.07
TNFAIP2-206ENST00000560428 FBXO41Q8TF61 875 aa27.99■■■□□ 2.07
TNFAIP2-206ENST00000560428 KIF15Q9NS87 1388 aa27.98■■■□□ 2.07
TNFAIP2-206ENST00000560428 MROH1Q8NDA8 1641 aa27.97■■■□□ 2.07
TNFAIP2-206ENST00000560428 ERBINQ96RT1 1412 aa27.97■■■□□ 2.07
TNFAIP2-206ENST00000560428 ABCC3O15438 1527 aa27.97■■■□□ 2.07
TNFAIP2-206ENST00000560428 PLA2R1Q13018 1463 aa27.96■■■□□ 2.07
TNFAIP2-206ENST00000560428 A2ML1A8K2U0 1454 aa27.95■■■□□ 2.07
TNFAIP2-206ENST00000560428 TNRQ92752 1358 aa27.94■■■□□ 2.06
TNFAIP2-206ENST00000560428 FBXO31Q5XUX0 539 aaPredicted RBP27.91■■■□□ 2.06
TNFAIP2-206ENST00000560428 PRDM15P57071 1507 aaPredicted RBP27.91■■■□□ 2.06
TNFAIP2-206ENST00000560428 ANKRD30AQ9BXX3 1397 aa27.9■■■□□ 2.06
TNFAIP2-206ENST00000560428 RRP7BPQ9NSQ0 103 aa27.9■■■□□ 2.06
TNFAIP2-206ENST00000560428 CERKQ8TCT0 537 aa27.89■■■□□ 2.06
TNFAIP2-206ENST00000560428 DEPDC5O75140 1603 aa27.88■■■□□ 2.05
TNFAIP2-206ENST00000560428 NLRP1Q9C000 1473 aa27.88■■■□□ 2.05
TNFAIP2-206ENST00000560428 CEP152O94986 1710 aa27.87■■■□□ 2.05
TNFAIP2-206ENST00000560428 ADGRL2O95490 1459 aa27.87■■■□□ 2.05
TNFAIP2-206ENST00000560428 PKD2Q13563 968 aa27.86■■■□□ 2.05
TNFAIP2-206ENST00000560428 SPATA31D1Q6ZQQ2 1576 aa27.86■■■□□ 2.05
TNFAIP2-206ENST00000560428 FAM50AQ14320 339 aaKnown RBP27.82■■■□□ 2.04
TNFAIP2-206ENST00000560428 CHIC2Q9UKJ5 165 aa27.82■■■□□ 2.04
TNFAIP2-206ENST00000560428 NCKAP5LQ9HCH0 1330 aa27.82■■■□□ 2.04
TNFAIP2-206ENST00000560428 ERVK-7P63135 1459 aa27.81■■■□□ 2.04
TNFAIP2-206ENST00000560428 ARHGAP31Q2M1Z3 1444 aa27.8■■■□□ 2.04
TNFAIP2-206ENST00000560428 LTBP4Q8N2S1 1624 aa27.78■■■□□ 2.04
TNFAIP2-206ENST00000560428 POLR1AO95602 1720 aaPredicted RBP27.78■■■□□ 2.04
TNFAIP2-206ENST00000560428 UGGT1Q9NYU2 1555 aa27.77■■■□□ 2.04
TNFAIP2-206ENST00000560428 KANK1Q14678 1352 aa27.77■■■□□ 2.04
TNFAIP2-206ENST00000560428 VWDEQ8N2E2 1590 aa27.75■■■□□ 2.03
TNFAIP2-206ENST00000560428 LMTK2Q8IWU2 1503 aa27.75■■■□□ 2.03
TNFAIP2-206ENST00000560428 THEMISQ8N1K5 641 aaPredicted RBP27.74■■■□□ 2.03
TNFAIP2-206ENST00000560428 NEURL4Q96JN8 1562 aa27.72■■■□□ 2.03
TNFAIP2-206ENST00000560428 GRWD1Q9BQ67 446 aaKnown RBP eCLIP27.71■■■□□ 2.03
TNFAIP2-206ENST00000560428 IQSEC2Q5JU85 1478 aa27.7■■■□□ 2.03
TNFAIP2-206ENST00000560428 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP27.7■■■□□ 2.025e-6■■■■■ 46.2
TNFAIP2-206ENST00000560428 ANKRD50Q9ULJ7 1429 aa27.69■■■□□ 2.02
TNFAIP2-206ENST00000560428 CFAP65Q6ZU64 1925 aaKnown RBP27.69■■■□□ 2.02
TNFAIP2-206ENST00000560428 ANKLE2Q86XL3 938 aa27.67■■■□□ 2.02
TNFAIP2-206ENST00000560428 ROCK1Q13464 1354 aa27.66■■■□□ 2.02
TNFAIP2-206ENST00000560428 UBR1Q8IWV7 1749 aa27.65■■■□□ 2.02
TNFAIP2-206ENST00000560428 ZNF335Q9H4Z2 1342 aaPredicted RBP27.65■■■□□ 2.02
TNFAIP2-206ENST00000560428 MED14O60244 1454 aa27.64■■■□□ 2.02
TNFAIP2-206ENST00000560428 EFCAB6Q5THR3 1501 aa27.64■■■□□ 2.02
TNFAIP2-206ENST00000560428 PPARGC1BQ86YN6 1023 aaKnown RBP27.59■■■□□ 2.01
TNFAIP2-206ENST00000560428 UNC13BO14795 1591 aa27.59■■■□□ 2.01
TNFAIP2-206ENST00000560428 NPHP4O75161 1426 aaPredicted RBP27.58■■■□□ 2.01
TNFAIP2-206ENST00000560428 IQGAP1P46940 1657 aa27.58■■■□□ 2.01
TNFAIP2-206ENST00000560428 KDM5AP29375 1690 aaKnown RBP27.57■■■□□ 2
TNFAIP2-206ENST00000560428 RPRD2Q5VT52 1461 aaKnown RBP27.57■■■□□ 2
TNFAIP2-206ENST00000560428 PIK3C2BO00750 1634 aa27.56■■■□□ 2
TNFAIP2-206ENST00000560428 SLIT1O75093 1534 aa27.56■■■□□ 2
TNFAIP2-206ENST00000560428 TET3O43151 1660 aa27.56■■■□□ 2
TNFAIP2-206ENST00000560428 NOS1P29475 1434 aa27.55■■■□□ 2
TNFAIP2-206ENST00000560428 ARHGAP23Q9P227 1491 aa27.55■■■□□ 2
TNFAIP2-206ENST00000560428 SYNMO15061 1565 aa27.55■■■□□ 2
TNFAIP2-206ENST00000560428 CPS1P31327 1500 aa27.52■■■□□ 2
TNFAIP2-206ENST00000560428 RRBP1Q9P2E9 1410 aaKnown RBP27.52■■■□□ 2
TNFAIP2-206ENST00000560428 GCC2Q8IWJ2 1684 aa27.52■■■□□ 2
TNFAIP2-206ENST00000560428 SCAF11Q99590 1463 aaKnown RBP27.51■■■□□ 2
TNFAIP2-206ENST00000560428 ITGAEP38570 1179 aa27.48■■□□□ 1.99
TNFAIP2-206ENST00000560428 IQGAP3Q86VI3 1631 aa27.48■■□□□ 1.99
TNFAIP2-206ENST00000560428 IDI1Q13907 227 aa27.47■■□□□ 1.99
TNFAIP2-206ENST00000560428 TMEM2Q9UHN6 1383 aa27.46■■□□□ 1.99
TNFAIP2-206ENST00000560428 SLC52A1Q9NWF4 448 aa27.45■■□□□ 1.98
TNFAIP2-206ENST00000560428 STAG3Q9UJ98 1225 aa27.45■■□□□ 1.98
TNFAIP2-206ENST00000560428 ADGRB3O60242 1522 aa27.45■■□□□ 1.98
TNFAIP2-206ENST00000560428 TXNDC2Q86VQ3 553 aa27.43■■□□□ 1.98
TNFAIP2-206ENST00000560428 EID1Q9Y6B2 187 aa27.43■■□□□ 1.98
TNFAIP2-206ENST00000560428 LTKP29376 864 aa27.42■■□□□ 1.98
TNFAIP2-206ENST00000560428 E9PCH4 1651 aa27.41■■□□□ 1.98
TNFAIP2-206ENST00000560428 NUP155O75694 1391 aa27.37■■□□□ 1.97
TNFAIP2-206ENST00000560428 STRCP1A6NGW2 1772 aa27.36■■□□□ 1.97
TNFAIP2-206ENST00000560428 UBAP1LF5GYI3 381 aa27.36■■□□□ 1.97
TNFAIP2-206ENST00000560428 TMEM131LA2VDJ0 1609 aa27.31■■□□□ 1.96
TNFAIP2-206ENST00000560428 NAIPQ13075 1403 aa27.3■■□□□ 1.96
TNFAIP2-206ENST00000560428 LRRC7Q96NW7 1537 aa27.3■■□□□ 1.96
TNFAIP2-206ENST00000560428 MYO5BQ9ULV0 1848 aa27.3■■□□□ 1.96
TNFAIP2-206ENST00000560428 ZFYVE9O95405 1425 aa27.27■■□□□ 1.96
TNFAIP2-206ENST00000560428 TOM1O60784 492 aa27.26■■□□□ 1.95
TNFAIP2-206ENST00000560428 HFM1A2PYH4 1435 aa27.24■■□□□ 1.95
TNFAIP2-206ENST00000560428 RIMS2Q9UQ26 1411 aa27.23■■□□□ 1.95
TNFAIP2-206ENST00000560428 SPHKAPQ2M3C7 1700 aa27.22■■□□□ 1.95
TNFAIP2-206ENST00000560428 HDGFP51858 240 aaKnown RBP27.22■■□□□ 1.95
TNFAIP2-206ENST00000560428 PLEKHG1Q9ULL1 1385 aa27.21■■□□□ 1.95
Retrieved 100 of 20,778 RNA–protein pairs in 83.6 ms